mRNA_P-wetherbeei_contig1359.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1359.3.1
Unique NamemRNA_P-wetherbeei_contig1359.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1359.3.1 vs. uniprot
Match: A0A7S2GCP4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GCP4_9STRA)

HSP 1 Score: 308 bits (789), Expect = 5.770e-101
Identity = 174/259 (67.18%), Postives = 208/259 (80.31%), Query Frame = 1
Query:    1 QVIEFLRILGEYRVKCEEEGDYLEAGRAHRQLEILRRQEVRRQQKAVRARQLGERQDVAAAHGMQFRDFDAAWDRYLAEYDRMAQAYVQQMTERHAVALLDMQQRLQREVADRAPKWSRELLEWRRRQHILARQRSYAEAQKVKKIADRLEEEERATAHEAHSLQLTRKETAFRLQQAAELRALLKRIDARRREHVKQRALDSKRLQQRNRNVQAVLESRQAVESQRLLADMKKSVACDAGVLFGATGVAAPPAPPYSA 777
            +V+EFLRIL EYR+KCEEEG+YLEAGRAH QL+ LR+QE +RQQKAVRARQ+ ER DV  AH MQ+ DF+AAWDRYL EYD+MAQ Y+QQMTERHAV LLD Q+ LQ E+ +R PKWSRELLEWRRRQH+LARQ++YAEAQK+K IAD+LE +E+A   ++ +    RKE  FR QQ AEL+ALLKRIDARR+EH+KQR LDSKRL QRNRNVQAVLES+QAVES R+ AD++K+       L+      APP PP SA
Sbjct:   89 KVMEFLRILEEYRIKCEEEGNYLEAGRAHEQLDTLRKQEEKRQQKAVRARQISERSDVQIAHNMQYSDFNAAWDRYLEEYDKMAQMYIQQMTERHAVNLLDFQRALQTEMTERPPKWSRELLEWRRRQHMLARQKNYAEAQKIKIIADKLENKEKAALEQSTASLFARKEAQFRQQQQAELQALLKRIDARRKEHIKQRNLDSKRLMQRNRNVQAVLESKQAVESNRIFADIRKN-------LYQVAYTKAPP-PPKSA 339          
BLAST of mRNA_P-wetherbeei_contig1359.3.1 vs. uniprot
Match: A0A7S2WV09_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WV09_9STRA)

HSP 1 Score: 305 bits (781), Expect = 6.420e-100
Identity = 164/237 (69.20%), Postives = 202/237 (85.23%), Query Frame = 1
Query:    1 QVIEFLRILGEYRVKCEEEGDYLEAGRAHRQLEILRRQEVRRQQKAVRARQLGERQDVAAAHGMQFRDFDAAWDRYLAEYDRMAQAYVQQMTERHAVALLDMQQRLQREVADRAPKWSRELLEWRRRQHILARQRSYAEAQKVKKIADRLEEEERATAHEAHSLQLTRKETAFRLQQAAELRALLKRIDARRREHVKQRALDSKRLQQRNRNVQAVLESRQAVESQRLLADMKKSVA 711
            +V+EFLRIL EYR+KCE+EGDYLEAGRA  QLE LRRQE +RQQKAVRARQ+ ER DV  AH MQ++DF+ AWDRYL EYD+MAQ Y+QQMTERHAV LLD Q+ LQ ++A++ PKWSRELLEWRRRQH+LARQ++YAEAQ++KKIAD+LE++ER    +  ++   RKE  FR QQ AEL+ALLKRIDARR+EH+KQR LDSKRL QRNRNVQAVLES+QAVES R+ ++++K++A
Sbjct:   97 KVMEFLRILEEYRLKCEDEGDYLEAGRAQEQLETLRRQEEKRQQKAVRARQIAERSDVQIAHNMQYQDFNKAWDRYLEEYDKMAQMYIQQMTERHAVNLLDFQRNLQSQMAEKPPKWSRELLEWRRRQHMLARQKNYAEAQRIKKIADKLEDKERKGVEQDTAIIFARKEAQFRQQQQAELQALLKRIDARRKEHIKQRNLDSKRLMQRNRNVQAVLESKQAVESNRIFSEIRKNLA 333          
BLAST of mRNA_P-wetherbeei_contig1359.3.1 vs. uniprot
Match: A0A7S2XWE0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWE0_9STRA)

HSP 1 Score: 303 bits (777), Expect = 8.710e-100
Identity = 162/236 (68.64%), Postives = 200/236 (84.75%), Query Frame = 1
Query:    1 QVIEFLRILGEYRVKCEEEGDYLEAGRAHRQLEILRRQEVRRQQKAVRARQLGERQDVAAAHGMQFRDFDAAWDRYLAEYDRMAQAYVQQMTERHAVALLDMQQRLQREVADRAPKWSRELLEWRRRQHILARQRSYAEAQKVKKIADRLEEEERATAHEAHSLQLTRKETAFRLQQAAELRALLKRIDARRREHVKQRALDSKRLQQRNRNVQAVLESRQAVESQRLLADMKKSV 708
            +V+EFLRIL EYRVKCEEEGDYLEAGRA++QL++L++QE RRQQKAVRARQ+ ERQDV  AH MQ+ DF+ AWD+Y+ EYD MAQ Y+QQMTERHAV LL+ Q+RLQ+E+ +R PKWSRELLEWRRRQH+LARQ++YAEAQKVKK+AD++E+ ER    + ++    RKE  FR QQ AEL+ALLKRIDARR+EH+KQR +DSKRL QRNRNVQAVLES+Q VE  R+  D+KK++
Sbjct:   72 KVMEFLRILEEYRVKCEEEGDYLEAGRANKQLQVLKKQEERRQQKAVRARQVAERQDVQIAHNMQYSDFNTAWDKYMEEYDSMAQMYIQQMTERHAVNLLEFQRRLQQEMQERPPKWSRELLEWRRRQHMLARQKNYAEAQKVKKVADQMEDRERQAMQQQNAAVFARKEAKFRAQQQAELQALLKRIDARRKEHIKQRNIDSKRLLQRNRNVQAVLESKQTVECNRVYQDIKKNL 307          
BLAST of mRNA_P-wetherbeei_contig1359.3.1 vs. uniprot
Match: A0A836C7C9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7C9_9STRA)

HSP 1 Score: 305 bits (782), Expect = 1.530e-99
Identity = 163/224 (72.77%), Postives = 196/224 (87.50%), Query Frame = 1
Query:   37 RVKCEEEGDYLEAGRAHRQLEILRRQEVRRQQKAVRARQLGERQDVAAAHGMQFRDFDAAWDRYLAEYDRMAQAYVQQMTERHAVALLDMQQRLQREVADRAPKWSRELLEWRRRQHILARQRSYAEAQKVKKIADRLEEEERATAHEAHSLQLTRKETAFRLQQAAELRALLKRIDARRREHVKQRALDSKRLQQRNRNVQAVLESRQAVESQRLLADMKKSV 708
            R+KCE EG+YLEAGRA +QL++LR+QE++RQQKA+RARQLGERQDV  AH MQF+DF AAWD+YL EYDRMAQ Y+QQMTERHAV LL++QQRLQ+E  +R PKWS+ELL+WRRRQH+LARQ +YAEAQKVKKIAD+LEE ER   HE+H+L + RKE  FR QQ AEL+ALL RIDARRREH+KQRALDSKRL QRNRNVQAVLE++Q+ E QRL A+++K+V
Sbjct:   35 RLKCEHEGNYLEAGRAFKQLDVLRKQEIQRQQKAMRARQLGERQDVQEAHDMQFQDFTAAWDKYLEEYDRMAQMYIQQMTERHAVGLLELQQRLQKEAQERLPKWSKELLDWRRRQHLLARQHNYAEAQKVKKIADQLEESEREAMHESHALYVGRKEAGFRAQQQAELQALLMRIDARRREHLKQRALDSKRLLQRNRNVQAVLEAKQSSEGQRLTAEIRKTV 258          
BLAST of mRNA_P-wetherbeei_contig1359.3.1 vs. uniprot
Match: A0A6V1W3Y9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1W3Y9_HETAK)

HSP 1 Score: 303 bits (777), Expect = 4.280e-99
Identity = 163/236 (69.07%), Postives = 199/236 (84.32%), Query Frame = 1
Query:    1 QVIEFLRILGEYRVKCEEEGDYLEAGRAHRQLEILRRQEVRRQQKAVRARQLGERQDVAAAHGMQFRDFDAAWDRYLAEYDRMAQAYVQQMTERHAVALLDMQQRLQREVADRAPKWSRELLEWRRRQHILARQRSYAEAQKVKKIADRLEEEERATAHEAHSLQLTRKETAFRLQQAAELRALLKRIDARRREHVKQRALDSKRLQQRNRNVQAVLESRQAVESQRLLADMKKSV 708
            +V+EFLRIL EYR+KCEEEGDYLEAGRA+RQL +L+ QE +RQQK +RARQ+ ERQDV  AH MQ+ DF+AAWD+Y+ EYD MAQ Y+QQMTERHAV LL+ QQ LQ+E+ DR PKW RELLEWRRRQH++ARQ++YAEAQK+KKIAD++EE ER    ++++    RKE  FR QQ AEL+ALLKRIDARR+EHVKQRA+DSKRL QRNRNVQAVLES+Q VE  RL A++KK++
Sbjct:  106 KVLEFLRILEEYRLKCEEEGDYLEAGRANRQLGLLKAQEEKRQQKTIRARQVAERQDVQIAHNMQYNDFNAAWDKYMEEYDGMAQMYIQQMTERHAVNLLEFQQGLQQEMRDRPPKWGRELLEWRRRQHLMARQKNYAEAQKIKKIADQMEERERQAMQQSNAAVFARKEAKFRQQQQAELQALLKRIDARRKEHVKQRAVDSKRLLQRNRNVQAVLESKQNVECNRLFAEVKKTI 341          
BLAST of mRNA_P-wetherbeei_contig1359.3.1 vs. uniprot
Match: A0A7S4EBY1_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EBY1_9STRA)

HSP 1 Score: 294 bits (753), Expect = 8.080e-96
Identity = 159/236 (67.37%), Postives = 199/236 (84.32%), Query Frame = 1
Query:    1 QVIEFLRILGEYRVKCEEEGDYLEAGRAHRQLEILRRQEVRRQQKAVRARQLGERQDVAAAHGMQFRDFDAAWDRYLAEYDRMAQAYVQQMTERHAVALLDMQQRLQREVADRAPKWSRELLEWRRRQHILARQRSYAEAQKVKKIADRLEEEERATAHEAHSLQLTRKETAFRLQQAAELRALLKRIDARRREHVKQRALDSKRLQQRNRNVQAVLESRQAVESQRLLADMKKSV 708
            +V+EFLRIL +YR KCE+EG+YLEA RAH+QLE+LR+QE +RQQKAVRARQ+ ERQDV  AH MQ+ DF+A+WD+YLAEYDRMAQ Y+QQMTERHA  LL+ Q++LQ E+A+R PKWSRELLEWRRRQH+LARQ++YAEAQ++KKIAD+LE++ER +         +RK+  FR QQ AEL+ALLKRIDARR+EH+KQR LDSKRL QRNRNVQAVLES+QA ES     +++K++
Sbjct:  119 KVLEFLRILEQYRRKCEKEGNYLEADRAHQQLEMLRKQEEKRQQKAVRARQIAERQDVQIAHNMQYTDFNASWDKYLAEYDRMAQIYIQQMTERHATNLLEFQRKLQSEMAERPPKWSRELLEWRRRQHMLARQKNYAEAQRIKKIADKLEDKERKSCENMSGGAFSRKDGQFRNQQQAELQALLKRIDARRKEHLKQRTLDSKRLLQRNRNVQAVLESKQAAESSATFMEIRKNL 354          
BLAST of mRNA_P-wetherbeei_contig1359.3.1 vs. uniprot
Match: K3WGJ8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGJ8_GLOUD)

HSP 1 Score: 273 bits (697), Expect = 7.960e-88
Identity = 148/236 (62.71%), Postives = 190/236 (80.51%), Query Frame = 1
Query:    1 QVIEFLRILGEYRVKCEEEGDYLEAGRAHRQLEILRRQEVRRQQKAVRARQLGERQDVAAAHGMQFRDFDAAWDRYLAEYDRMAQAYVQQMTERHAVALLDMQQRLQREVADRAPKWSRELLEWRRRQHILARQRSYAEAQKVKKIADRLEEEERATAHEAHSLQLTRKETAFRLQQAAELRALLKRIDARRREHVKQRALDSKRLQQRNRNVQAVLESRQAVESQRLLADMKKSV 708
            +V+EF+ IL EYR+KCEE+G+YLEA RA  QL  LR+QE +RQ KA++A+Q+ ERQD+  AH MQF DF+ AWD+Y+ EYDRMAQAYV+QMTE+HA  L + Q++LQ+E+ +R PK+S+EL+EWRRRQH LA+Q+SY EAQK+KKIAD +EE+ER+  +E H    TRKE   R QQ AEL ALLKR+D RR+EH+KQR LDSKRL QRNRNVQAVLES+Q VE+ + L D+K S+
Sbjct:   45 KVMEFVTILEEYRMKCEEDGNYLEAQRADTQLTALRKQEFKRQSKALKAKQIAERQDIQIAHNMQFNDFNQAWDQYMEEYDRMAQAYVKQMTEKHATDLREFQEKLQQEILERPPKFSKELIEWRRRQHRLAQQKSYGEAQKIKKIADEIEEDERSKMNEEHRQIFTRKEAKLRQQQQAELHALLKRVDGRRKEHLKQRNLDSKRLLQRNRNVQAVLESKQIVEATKKLQDIKMSL 280          
BLAST of mRNA_P-wetherbeei_contig1359.3.1 vs. uniprot
Match: A0A7S3HQS7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQS7_9STRA)

HSP 1 Score: 271 bits (694), Expect = 7.640e-85
Identity = 147/246 (59.76%), Postives = 197/246 (80.08%), Query Frame = 1
Query:    1 QVIEFLRILGEYRVKCEEEGDYLEAGRAHRQLEILRRQEVRRQQKAVRARQLGERQDVAAAHGMQFRDFDAAWDRYLAEYDRMAQAYVQQMTERHAVALLDMQQRLQREVADRAPKWSRELLEWRRRQHILARQRSYAEAQKVKKIADRLEEEERATAHEAHSLQLTRKETAFRLQQAAELRALLKRIDARRREHVKQRALDSKRLQQRNRNVQAVLESRQAVESQRLLADMKKSVACDAGVLFGA 738
            +V+EFL+IL EYRVKCEEEG+YLEA RA+RQL +LR+QE +RQQKA+ ARQ+ E+QDV  AH MQF +F+ +WD+YL +YD MAQ Y+QQMTERHAV LL+ Q++L++++AD+ PKWS+ELL+ RR+QHI AR ++Y  AQK+KK +D+ EE ER    +A ++   R+E  FR+QQ  EL+ALLKRI+ RR+EH+KQR LD+KRL QRNRNVQAVLES+QA E Q+L A++KK++   A +  GA
Sbjct:   97 KVLEFLQILEEYRVKCEEEGNYLEAARAYRQLGVLRKQEEKRQQKAITARQISEKQDVQLAHNMQFNEFNKSWDKYLEDYDSMAQTYIQQMTERHAVVLLEFQKQLRKDLADKPPKWSKELLDQRRKQHINARNKNYTLAQKLKKQSDKTEERERRELEQAQAVIFARREAKFRMQQQTELQALLKRIECRRKEHLKQRNLDTKRLLQRNRNVQAVLESKQATECQKLFAEIKKTLYSSAALHGGA 342          
BLAST of mRNA_P-wetherbeei_contig1359.3.1 vs. uniprot
Match: A0A5D6Y5P3_9STRA (EF-hand domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y5P3_9STRA)

HSP 1 Score: 266 bits (679), Expect = 1.950e-84
Identity = 146/236 (61.86%), Postives = 189/236 (80.08%), Query Frame = 1
Query:    1 QVIEFLRILGEYRVKCEEEGDYLEAGRAHRQLEILRRQEVRRQQKAVRARQLGERQDVAAAHGMQFRDFDAAWDRYLAEYDRMAQAYVQQMTERHAVALLDMQQRLQREVADRAPKWSRELLEWRRRQHILARQRSYAEAQKVKKIADRLEEEERATAHEAHSLQLTRKETAFRLQQAAELRALLKRIDARRREHVKQRALDSKRLQQRNRNVQAVLESRQAVESQRLLADMKKSV 708
            +V+EF+ IL EYR+KCEE+G+YLEA RA  QL  LR+QE +RQ KA++A+Q+ ERQD+  AH MQF DF+ AWD+Y+ EYDRMAQAYV+QMTE+HA  L + Q +LQ+EV +R PK+S+EL+EWRRRQH LA+Q++Y+EAQK+K IAD +EE+ERA   + +     RKE+  R QQ AEL+ALLKRID RR+EH+KQR LDSKRL QRNRNVQAVLES+Q VE+ + L D+K S+
Sbjct:   99 KVMEFITILEEYRMKCEEDGNYLEAQRADSQLTALRKQEFKRQSKALKAKQIAERQDIQIAHNMQFTDFNQAWDQYMDEYDRMAQAYVRQMTEKHATDLREFQDKLQQEVLERPPKFSKELIEWRRRQHRLAQQKAYSEAQKIKTIADEIEEDERARLGDEYRQLFARKESKLRQQQQAELQALLKRIDGRRKEHLKQRTLDSKRLLQRNRNVQAVLESKQIVEATKKLQDIKMSL 334          
BLAST of mRNA_P-wetherbeei_contig1359.3.1 vs. uniprot
Match: A0A7S1C3U0_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3U0_9STRA)

HSP 1 Score: 264 bits (675), Expect = 5.970e-84
Identity = 147/237 (62.03%), Postives = 188/237 (79.32%), Query Frame = 1
Query:    1 QVIEFLRILGEYRVKCEEEGDYLEAGRAHRQLEILRRQEVRRQQKAVRARQLGERQDVAAAHGMQFRDFDAAWDRYLAEYDRMAQAYVQQMTERHAVALLDMQQRLQREVADRAPKWSRELLEWRRRQHILARQRSYAEAQKVKKIADRLEEEERATAHEAHSLQLTRKETAFRLQQAAELRALLKRIDARRREHVKQRALDSKRLQQRNRNVQAVLESRQAVESQRLLADMKKSVA 711
            +V+EFLRIL EYR+KCE EG+YLEAGRA  QLE LR+QE +RQ KA++ARQL ER DV  AH MQ+ +F+ AWD+Y+ EYDRMAQ Y+QQM+ERHAV L + Q++L  E+  R PK+SRELL+WR+RQ +LA+Q+ YAEAQK+K+IAD +E  ERA   +       ++E+ FR QQ +EL ALLKRID RR+EH+KQRALDSKRL QRNRNVQAVLES+Q+VE+ R  AD+K ++A
Sbjct:  106 KVLEFLRILDEYRLKCESEGNYLEAGRAAGQLETLRKQEEKRQHKALKARQLAERHDVQIAHNMQYAEFNEAWDKYMEEYDRMAQMYIQQMSERHAVKLREFQEKLHEELTKRPPKFSRELLDWRQRQLMLAKQKKYAEAQKIKRIADEMERRERAKLDDERLTIFQQRESKFRSQQQSELAALLKRIDGRRKEHLKQRALDSKRLLQRNRNVQAVLESKQSVEAGRKKADIKAALA 342          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1359.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2GCP4_9STRA5.770e-10167.18Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2WV09_9STRA6.420e-10069.20Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2XWE0_9STRA8.710e-10068.64Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836C7C9_9STRA1.530e-9972.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1W3Y9_HETAK4.280e-9969.07Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4EBY1_9STRA8.080e-9667.37Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
K3WGJ8_GLOUD7.960e-8862.71Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7S3HQS7_9STRA7.640e-8559.76Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A5D6Y5P3_9STRA1.950e-8461.86EF-hand domain-containing protein n=1 Tax=Pythium ... [more]
A0A7S1C3U0_9STRA5.970e-8462.03Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1359contigP-wetherbeei_contig1359:5179..7096 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog65071.PYU1_T004089
Model size780
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.31e-88
EggNOG OGs2CNBR@1|root,2QV22@2759|Eukaryota,1MEZG@121069|Pythiales
Ec32 ortholog descriptionEF-hand domain pair
Ec32 orthologEc-18_003840.1
DescriptionTransmembrane protein. Source PGD
Cds size780
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185991.415084-CDS-P-wetherbeei_contig1359:5178..53341683185991.415084-CDS-P-wetherbeei_contig1359:5178..5334Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1359 5179..5334 -
1683185991.4237316-CDS-P-wetherbeei_contig1359:5669..58671683185991.4237316-CDS-P-wetherbeei_contig1359:5669..5867Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1359 5670..5867 -
1683185991.4310145-CDS-P-wetherbeei_contig1359:6228..63991683185991.4310145-CDS-P-wetherbeei_contig1359:6228..6399Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1359 6229..6399 -
1683185991.438431-CDS-P-wetherbeei_contig1359:6614..67521683185991.438431-CDS-P-wetherbeei_contig1359:6614..6752Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1359 6615..6752 -
1683185991.445631-CDS-P-wetherbeei_contig1359:6979..70961683185991.445631-CDS-P-wetherbeei_contig1359:6979..7096Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1359 6980..7096 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1359.3.1prot_P-wetherbeei_contig1359.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1359 5179..7096 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1359.3.1

>prot_P-wetherbeei_contig1359.3.1 ID=prot_P-wetherbeei_contig1359.3.1|Name=mRNA_P-wetherbeei_contig1359.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=260bp
QVIEFLRILGEYRVKCEEEGDYLEAGRAHRQLEILRRQEVRRQQKAVRAR
QLGERQDVAAAHGMQFRDFDAAWDRYLAEYDRMAQAYVQQMTERHAVALL
DMQQRLQREVADRAPKWSRELLEWRRRQHILARQRSYAEAQKVKKIADRL
EEEERATAHEAHSLQLTRKETAFRLQQAAELRALLKRIDARRREHVKQRA
LDSKRLQQRNRNVQAVLESRQAVESQRLLADMKKSVACDAGVLFGATGVA
APPAPPYSAP
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mRNA from alignment at P-wetherbeei_contig1359:5179..7096-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1359.3.1 ID=mRNA_P-wetherbeei_contig1359.3.1|Name=mRNA_P-wetherbeei_contig1359.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1918bp|location=Sequence derived from alignment at P-wetherbeei_contig1359:5179..7096- (Phaeothamnion wetherbeei SAG_119_79)
CAGGTTATTGAATTTCTGCGCATCCTGGGCGAGTACCGCGTCAAGTGCGA GGAAGAGGGCGACTACCTTGAGGCCGGCCGTGCCCATCGACAACTCGAGA TTCTGCGCCGCCAGGAGGTGAAATTCTTTCGGTGTATTCGCAGGGTTGAT ACCAAGTGCCATGGTGCTGTGGCGGTAGTGTACTGAAAGACTGGTGCAAC TGGCTACAGTCACAGTAGTCCCAATGGTTGTAGGAAATCCAAGCACTGAT CAGCCGACGCTCTCTCTGGGCCCCTACAAACGTGCTTTCCTTCCCCTGGA AAAGTAATCCAATCCATACCTGTGCCTGCCTGCCTGCGATGCAGGTACGG CGGCAGCAGAAGGCGGTGCGTGCGCGGCAGCTCGGGGAGCGGCAAGACGT GGCGGCAGCCCACGGGATGCAGTTCCGCGACTTCGACGCCGCCTGGGACC GATATCTCGCCGAGTACGACCGCATGGCTCAGGTGCAGCGGGCAAGAACT GGCCCGAATGGCGGCGCCAAGGGCAGCTGGCCCGATTGAAACGCCTTCCG CGCTGTCATACGATTTCTGTCCGCCGCGGCCCCTCCTCCTTCATTCGCTT CTGCGTCCAACTCTCCCCGCTCTCCTCCCCTTATCCTTTCCTCCTCTTTC TGAACATCTTCCCCGAACCCTTTACCCCGCTTCTGTCTGCCGACCAGGCA TACGTGCAGCAGATGACGGAGAGGCACGCAGTGGCGCTGCTCGACATGCA GCAGCGGCTGCAGCGCGAAGTGGCGGACCGCGCCCCAAAATGGAGCCGCG AGCTGCTCGAGTGGCGCCGGAGGCAGCACATCCTCGCCCGCCAGCGCAGC TATGCCGAGGCGCAAAAGGTGTGCTTGCTTTCGCCGTGTACAGGAGGGGA ACTGAGTGCGTGGCAAATGAGGAGGCTCGGAGAGAATCGTCTGTTGCATC GTGTAGCAGCTTTGTGAGGCGAGGGAAGCTACGGCACGGCAGCGACATGC GAGGACAATGGAAAGAGGCGCTTCTTTTCATGTCTTCTTTCTTGCTTGCT TGCTAACTCCTGCCAACCGTTCCTCCCGGCTGCACCAATGCCGTTAAGCT GGCGGAGCGGCACTGCGGGTGACCACATCGTGTCGCCGCCAGGCCTTGAC AAACTTCCGTCACCTCGACATCGAAACTGGCACTGGCCGCCAAACAAACG CAAACCGAACCGAATCGAATCCATGGCAGGTGAAGAAGATCGCGGACCGT CTGGAGGAGGAGGAGCGCGCGACGGCCCACGAGGCGCACTCGCTGCAGCT CACCCGCAAGGAGACGGCCTTCCGCTTGCAGCAGGCGGCCGAGCTGCGAG CGCTGCTCAAGCGCATCGATGCGAGGCGCCGCGAGCACGTCAAGCAGCGC GCGCTCGACAGCAAGCGCCTCCAGCAAGTGTGTGCGGGCAAGGGGGGATT CCGGCGGGCGCGCGGGCACGGGGGGCGGGTTTTTGTTTGGGGTCCTGGGG TTTTCGTACTGATCGACATTGTCAAGAGCTTCTTGTTCACTTGACCGAAG CTGTTTGTAGTGCGCAAAGCTTCCCTTTTCGCGGCGCCTCGAAGCAAGAA CTGCAAAAGAAAGAGACGAACGATCCATCGCGCCGTTTCTGAAAGTGACT TTTTGCCCGATCTCTCCCGCTCTCCGCCGCAACCGCGCGGTGCCACCGCC CGCATCGCCGCCAACACTTCCACCACTGGATTTACCACCCAAACAACGAA ACAAACAAACAGCGGAACCGCAACGTGCAGGCCGTCCTGGAGAGCCGCCA GGCGGTCGAGTCGCAGCGCCTCCTCGCCGACATGAAGAAGAGCGTCGCCT GCGACGCTGGCGTGCTCTTCGGCGCAACCGGCGTCGCCGCCCCGCCAGCG CCGCCGTACTCGGCGCCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1359:5179..7096-

>mRNA_P-wetherbeei_contig1359.3.1 ID=mRNA_P-wetherbeei_contig1359.3.1|Name=mRNA_P-wetherbeei_contig1359.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=780bp|location=Sequence derived from alignment at P-wetherbeei_contig1359:5179..7096- (Phaeothamnion wetherbeei SAG_119_79)
CAGGTTATTGAATTTCTGCGCATCCTGGGCGAGTACCGCGTCAAGTGCGA
GGAAGAGGGCGACTACCTTGAGGCCGGCCGTGCCCATCGACAACTCGAGA
TTCTGCGCCGCCAGGAGGTACGGCGGCAGCAGAAGGCGGTGCGTGCGCGG
CAGCTCGGGGAGCGGCAAGACGTGGCGGCAGCCCACGGGATGCAGTTCCG
CGACTTCGACGCCGCCTGGGACCGATATCTCGCCGAGTACGACCGCATGG
CTCAGGCATACGTGCAGCAGATGACGGAGAGGCACGCAGTGGCGCTGCTC
GACATGCAGCAGCGGCTGCAGCGCGAAGTGGCGGACCGCGCCCCAAAATG
GAGCCGCGAGCTGCTCGAGTGGCGCCGGAGGCAGCACATCCTCGCCCGCC
AGCGCAGCTATGCCGAGGCGCAAAAGGTGAAGAAGATCGCGGACCGTCTG
GAGGAGGAGGAGCGCGCGACGGCCCACGAGGCGCACTCGCTGCAGCTCAC
CCGCAAGGAGACGGCCTTCCGCTTGCAGCAGGCGGCCGAGCTGCGAGCGC
TGCTCAAGCGCATCGATGCGAGGCGCCGCGAGCACGTCAAGCAGCGCGCG
CTCGACAGCAAGCGCCTCCAGCAACGGAACCGCAACGTGCAGGCCGTCCT
GGAGAGCCGCCAGGCGGTCGAGTCGCAGCGCCTCCTCGCCGACATGAAGA
AGAGCGTCGCCTGCGACGCTGGCGTGCTCTTCGGCGCAACCGGCGTCGCC
GCCCCGCCAGCGCCGCCGTACTCGGCGCCC
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