mRNA_P-wetherbeei_contig1358.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1358.4.1 vs. uniprot
Match: D8LQD7_ECTSI (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD7_ECTSI) HSP 1 Score: 130 bits (328), Expect = 1.180e-27 Identity = 218/780 (27.95%), Postives = 281/780 (36.03%), Query Frame = 1
Query: 1 YDVYAGIDVYGRGTAYGGGYNTGKALGKIARAGLSAAIFAPGWSMENETPGGGHVVPATA---WQTVEADFNNANQLFWAAAAADWXXXXXXXXXXXXSAAPAVLAQHRAAGGPSGFPTL--VTRFGRGIGAGVWIAGQRVA-----------SAGEWPLPPSST---------------AAVYDLCGQDISPLALGLGGS-DGGNRGRKVNARNGGXXXXXXXXXXXXXXXXASGSGGTEGATPLTIRGDAACGWCWVSAFAEYRCAFDGTSCLALAGELAPGVTAAAALFKCGWSLVPGPLAARITFRVAAGCEVSLVLLLLDAG--GAVHEVVLRA-NKAAGPAPAAAV-----------------TEVSPRVVGSSGAAAAALARR-------NFPCSAMSSKRIALRESKAGAVSTYAPAHEETTAAAPAPPXXXXXXXXISMSVPDPALGPWVTRQFVVRDAAMLG-QTLQQVKVVAS-------LAGQQPVGVAAAGDTAEAAT--------------TAAAAGDNPTPGGAVLVPYSCCLGEVAVGPMVLPGKAFCAVRRLWVYDLDLVPAVSLPAASAATAMAEAAAVTEPAVAVAASGERGGSAYYGGGSSQNAILGLTLAWEMALSTAGSXXXXXXXXXXXXXAAGP--PLHWDVWAFDEVEHAAVLSVAAAAVDRGRHFVAAEAPEASPSWVAGAAEAGRMRWAGRAYGDRLRIAGMPVVLAGGSGGGGSGARPGAVMAAVHRTAAAVPSLSVCFVLQEVDAAGRRQP 2091
YDVY GID +GRGT GGG++ KALGKI RAG+SAA+FAP W+ME ET GGG V P WQ VE +F+ + FW+ AA W GG G P L V FG G+G I G+ VA + GE A YDL Q ++PL G GG +GG R V AR G S ++G TIR +FAE +FDGTS L G L TA+ L+ C L PL R+TF A +++L+L L G G EVVLR K P AV E S R + ++ +A L R P A+ ++ R AG +P+ T A+P+ W+TR +VVRD M G + +++V +V + L+ Q+ G AA +A +A A G A L Y LGEVA+GP RR V L A A E GE GG + L+LAWE G A P LH D+W + E SW RW GRAYG + R+ + V GGG G R G T A S+ +Q+V+A G R+P
Sbjct: 399 YDVYMGIDTFGRGTWGGGGFDVDKALGKIRRAGVSAALFAPAWTMEEETTGGGRVDPDPGRGGWQEVEQEFSEIDTEFWSKIAAVWQPPRSLPG-----------------GGRGGAPLLPLVVNFGHGLGNAWRIRGEEVAVFRASRAADDDATGEGDKNXXXXXXXXXXXXDDRLVVGGAFYDLASQCLTPLVGGRGGPVNGGLRSDVVKARRAGD------------------SSDSQGGANGTIRA--------TYSFAE---SFDGTSSLRFTGVLNEKATASFPLYSCDVPLPADPLEIRLTFCGNADSDMALLLSLDVPGQLGGRREVVLRDWGKEGAPKKQQAVFSKRLTFTDTKATYCPVREESDRALSATASAEYGLQARVRALRDAGEPYDAIRTRLREERSGGAGVAGADSPSSAAATGASPS--------------------STWITRTYVVRDLRMGGSRAIREVSLVCARRNKLPTLSTQEEGGEKAAAGSAWSALRGXXXXXXXXXXXXNAGGKSGAERRGVAGLAAYRAFLGEVAIGPW----------RRETPSTFGRVE--GLRAKEVACFYGE--------------GETGGXXXX------XVTVDLSLAWESE-GCVGRGRGFVKKDDGVFGAGSPWTTLHCDIWGA---------------------YGGEEEGXXXGSW----------RWLGRAYGQKYRLTNLRV-------GGGGGCREGGA------TGEAASGSSLVLAVQQVNAMGYREP 1035
BLAST of mRNA_P-wetherbeei_contig1358.4.1 vs. uniprot
Match: A0A6H5KWK2_9PHAE (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWK2_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 2.480e-17 Identity = 48/86 (55.81%), Postives = 59/86 (68.60%), Query Frame = 1
Query: 1 YDVYAGIDVYGRGTAYGGGYNTGKALGKIARAGLSAAIFAPGWSMENETPGGGHVVPATA---WQTVEADFNNANQLFWAAAAADW 249
YDVY G+D +GRGT GGG++ KALGKI RAG+SAA+FAP W+ME ET GGG V P WQ VE +F+ + FW+ AA W
Sbjct: 398 YDVYMGVDTFGRGTWGGGGFDVDKALGKIRRAGVSAALFAPAWTMEEETTGGGQVDPDPGRGGWQKVEQEFSEIDSKFWSKIAAVW 483
BLAST of mRNA_P-wetherbeei_contig1358.4.1 vs. uniprot
Match: A0A7S4D863_HETAK (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D863_HETAK) HSP 1 Score: 70.9 bits (172), Expect = 6.720e-11 Identity = 38/78 (48.72%), Postives = 46/78 (58.97%), Query Frame = 1
Query: 1 YDVYAGIDVYGRGTAYGGGYNTGKALGKIARAGLSAAIFAPGWSMENETPGGGHVV--PATAWQTVEADFNNANQLFW 228
+DVY GIDV+GR T GGG KAL KIA AG+SAA+FAPGW M+N+ GG W E +F + FW
Sbjct: 16 WDVYFGIDVFGRNTYGGGGMQCDKALEKIAEAGVSAALFAPGWVMQNQMENGGSFTGNDPKEWDRTEEEFVKLSTEFW 93
BLAST of mRNA_P-wetherbeei_contig1358.4.1 vs. uniprot
Match: A0A5J5F881_9PEZI (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=1 Tax=Sphaerosporella brunnea TaxID=1250544 RepID=A0A5J5F881_9PEZI) HSP 1 Score: 68.6 bits (166), Expect = 2.710e-8 Identity = 46/138 (33.33%), Postives = 64/138 (46.38%), Query Frame = 1
Query: 7 VYAGIDVYGRGTAYGGGYNTGKALGKIARAGLSAAIFAPGWSMENETPGGGHVVPATAWQTVEA-DFNNANQLFWAAAAADWXXXXXXXXXXXXSAAPAVLAQHRAAGGPSGFPTLVTRFGRGIGAGVWIAGQRVASA 417
V+ GID YGRG+ GGG+ G AL +I +AGL AA+FAPGW+ W+ E +F N + FW A + + AG GF T F RG G+G+W+ G++V +A
Sbjct: 261 VFMGIDCYGRGSLGGGGFGVGIALEEIRKAGLQAALFAPGWT----------------WEHYEGKNFRNVEKKFWGVVAQT--------------------VEPKPAGDKDGF---YTSFNRGFGSGLWVQGKKVTAA 359
BLAST of mRNA_P-wetherbeei_contig1358.4.1 vs. uniprot
Match: A0A6G1MND5_ORBOL (DASH complex subunit DAM1 n=9 Tax=Orbiliaceae TaxID=47021 RepID=A0A6G1MND5_ORBOL) HSP 1 Score: 67.8 bits (164), Expect = 5.820e-8 Identity = 34/47 (72.34%), Postives = 36/47 (76.60%), Query Frame = 1
Query: 1 YDVYAGIDVYGRGTAYGGGYNTGKALGKIARAGLSAAIFAPGWSMEN 141
YDVY GIDV+GRGT GGG+ TG AL I AGLSAAIFAPGW EN
Sbjct: 496 YDVYMGIDVFGRGTFGGGGWGTGTALSVIRPAGLSAAIFAPGWVFEN 542
BLAST of mRNA_P-wetherbeei_contig1358.4.1 vs. uniprot
Match: A0A196SKL3_BLAHN (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SKL3_BLAHN) HSP 1 Score: 67.4 bits (163), Expect = 8.220e-8 Identity = 37/73 (50.68%), Postives = 47/73 (64.38%), Query Frame = 1
Query: 4 DVYAGIDVYGRGTAYGGGYNTGKALGKIARAGLSAAIFAPGWSMENETPGGGHVVPATAWQTVEADFNNANQL 222
DVY G+DV+GRG+ GGGYNT KAL +IA+ GLS A+FAPGW E+E + + + EADF N L
Sbjct: 637 DVYVGVDVWGRGSFSGGGYNTHKALEQIAKQGLSCALFAPGWVFEHEFD----CIYSPEYVRKEADFWNRTLL 705
BLAST of mRNA_P-wetherbeei_contig1358.4.1 vs. uniprot
Match: A0A640KRT9_LEITA (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=1 Tax=Leishmania tarentolae TaxID=5689 RepID=A0A640KRT9_LEITA) HSP 1 Score: 66.2 bits (160), Expect = 1.850e-7 Identity = 53/166 (31.93%), Postives = 76/166 (45.78%), Query Frame = 1
Query: 4 DVYAGIDVYGRGTAYGGGYNTGKALGKIARAGLSAAIFAPGWSMENETPG---GGHVVPATAWQTVEADFNNANQLFWAAAAADWXXXXXXXXXXXXSAAPAVLAQHRAAGGPSGFPTLVTRFGRGIGAGVWIAGQRVASAGEWPLPPSSTAAVYDLCG-QDISPL 489
DVY G+DV+GR GGGYNT ++ + A+A LS A+FAPGW+ME E+ G G + W ++ F +L W+ A S A A A H A L T F G+G ++ G RV + G+ T+ ++ G D+ P
Sbjct: 488 DVYVGVDVFGRNMYGGGGYNTHVSVAEAAKASLSVALFAPGWTMERESKGRRDGFQSAESRMWFPMQKKFLYHARLIWSTGAT-------AGGLQQSSTADASDAHHETA------LCLWTSFQSGVGYDFYVNGHRV-TGGDAAASVVGTSGWCEISGAHDLPPF 639
BLAST of mRNA_P-wetherbeei_contig1358.4.1 vs. uniprot
Match: A0A7C8PU12_ORBOL (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=2 Tax=Orbilia oligospora TaxID=2813651 RepID=A0A7C8PU12_ORBOL) HSP 1 Score: 65.9 bits (159), Expect = 1.900e-7 Identity = 33/47 (70.21%), Postives = 36/47 (76.60%), Query Frame = 1
Query: 1 YDVYAGIDVYGRGTAYGGGYNTGKALGKIARAGLSAAIFAPGWSMEN 141
+DVY GIDV+GRGT GGG+ TG AL I AGLSAAIFAPGW EN
Sbjct: 248 HDVYMGIDVFGRGTFGGGGWGTGTALSVIRPAGLSAAIFAPGWVFEN 294
BLAST of mRNA_P-wetherbeei_contig1358.4.1 vs. uniprot
Match: A0A0S4J764_BODSA (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4J764_BODSA) HSP 1 Score: 65.1 bits (157), Expect = 4.560e-7 Identity = 49/143 (34.27%), Postives = 65/143 (45.45%), Query Frame = 1
Query: 4 DVYAGIDVYGRGTAYGGGYNTGKALGKIARAGLSAAIFAPGWSMENETPGGGHVVPATAWQTVEADFNNANQLFWAAAAADWXXXXXXXXXXXXSAAPAVLAQHRAAG--GPSGFPTLVTRFGRGIGAGVWIAGQRVASAGEW 426
DVY GID +GR T GGGY+ A+ +I + G SAA+FAPGW++EN + G W+ F A+ FW A + A VL R G G S P L+ F RG G + G+R+ W
Sbjct: 874 DVYVGIDCFGRSTFGGGGYDCHIAMQEIVQRGQSAAMFAPGWTLENASGG--------TWE----GFLTADAKFWGRIAPRYLTNVPAIRKC--DAILGVLDAQRGVGVKGGSTTPLLLASFSRGAGTSFHLGGERLIGCDGW 1002
BLAST of mRNA_P-wetherbeei_contig1358.4.1 vs. uniprot
Match: A0A4D9D452_9STRA (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D452_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 5.520e-7 Identity = 56/192 (29.17%), Postives = 79/192 (41.15%), Query Frame = 1
Query: 1 YDVYAGIDVYGRGTAYGGGYNTGKALGKIARAGLSAAIFAPGWSMENE--------------------------------TPGGGHVVPATA-WQTVEADFNNANQLFWAAAAADWXXXXXXXXXXXXSAAPAVLAQHRAAGGP-SGFPTLVTRFGRGIGAGVWIAGQRVASAGEWPLPPSSTAAVYDLCGQ 474
+DV+ G+D +GRGT GGG+N +AL AG+SAA+FAPGW E E + H+ A A + +E F + FW+ A W + GGP +G T +T FG G+G VW+A AG+ L P+ TA V +C +
Sbjct: 323 WDVWMGVDCFGRGTYGGGGFNCSEALEAARAAGVSAALFAPGWIWEEEVRRRETVRGQGAPEEHVIDSLSSPILKAHLPQSHASSHLSSAVAKFYRIEGIFEAVQEEFWSKVARIWPRRPLPAGSLGGR------KEEGGEGGPKTGERTFLTNFGTGVGLKVWVA------AGQISLCPAITA-VATICAE 501 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1358.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1358.4.1 >prot_P-wetherbeei_contig1358.4.1 ID=prot_P-wetherbeei_contig1358.4.1|Name=mRNA_P-wetherbeei_contig1358.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=702bp YDVYAGIDVYGRGTAYGGGYNTGKALGKIARAGLSAAIFAPGWSMENETPback to top mRNA from alignment at P-wetherbeei_contig1358:4991..7318- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1358.4.1 ID=mRNA_P-wetherbeei_contig1358.4.1|Name=mRNA_P-wetherbeei_contig1358.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2328bp|location=Sequence derived from alignment at P-wetherbeei_contig1358:4991..7318- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1358:4991..7318- >mRNA_P-wetherbeei_contig1358.4.1 ID=mRNA_P-wetherbeei_contig1358.4.1|Name=mRNA_P-wetherbeei_contig1358.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2106bp|location=Sequence derived from alignment at P-wetherbeei_contig1358:4991..7318- (Phaeothamnion wetherbeei SAG_119_79)back to top |