mRNA_P-wetherbeei_contig1356.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1356.4.1 vs. uniprot
Match: D7FKF4_ECTSI (PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKF4_ECTSI) HSP 1 Score: 79.0 bits (193), Expect = 5.040e-16 Identity = 46/106 (43.40%), Postives = 71/106 (66.98%), Query Frame = 1
Query: 16 GTSTLTLASRTGDVLLELEAESIEARDAWVGGLRNL-----LPPXXXXXXXXXX-----QANKQKHFAMRQLELRDKKREAEARKAKLIEETGGLKYTAIAMANRA 303
G+++L ++S+TGD+LLELEAE+ RD+WV L+ + L P QA +Q+H A R +E++ K++AEARKA+ ++ETGG++YTA+AMANR+
Sbjct: 95 GSASLVMSSKTGDLLLELEAENGSVRDSWVESLQAVAEDVRLNPQARMAQKSVKDRMKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETGGMQYTALAMANRS 200
BLAST of mRNA_P-wetherbeei_contig1356.4.1 vs. uniprot
Match: A0A7S2SSX7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSX7_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.040e-12 Identity = 47/98 (47.96%), Postives = 61/98 (62.24%), Query Frame = 1
Query: 28 LTLASRTGDVLLELEAESIEARDAWVGGLRNL--LP-----PXXXXXXXXXXQANKQKHFAMRQLELRDKKREAEARKAKLIEETGGLKYTAIAMANR 300
LT+ S+TGD+LLE+EA + RD WV + LP P +A KQ +F R LEL KK+ AE RKAKL++E+GGLKYTA+AMA+R
Sbjct: 91 LTVHSKTGDLLLEVEAVDGQTRDYWVPAIAMAAELPVKGPLPDRPQTSSMRDRAAKQAYFMKRDLELTAKKQLAEQRKAKLMKESGGLKYTALAMASR 188
BLAST of mRNA_P-wetherbeei_contig1356.4.1 vs. uniprot
Match: A0A835ZIX0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIX0_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 4.830e-11 Identity = 48/119 (40.34%), Postives = 61/119 (51.26%), Query Frame = 1
Query: 16 GTSTLTLASRTGDVLLELEAES-------------IEARDAWVGGLRNLLPPXXXXXXXXXXQ----------ANKQKHFAMRQLELRDKKREAEARKAKLIEETGGLKYTAIAMANRA 303
G + L L SR GD+LLE++ +S RDAW L +L A KQKHFA R +EL+ KR+AEARKA+ + E GGLKYTA+AMANR+
Sbjct: 100 GETGLALVSRRGDLLLEVDMDSGTGXXXXXXXXXXXAQRDAWHAALTDLTEDLRRNPQRAEASRSVAERVKEAALKQKHFAQRSIELQAAKRDAEARKARFMAEAGGLKYTAMAMANRS 218
BLAST of mRNA_P-wetherbeei_contig1356.4.1 vs. uniprot
Match: W7T894_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T894_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 1.070e-10 Identity = 41/111 (36.94%), Postives = 60/111 (54.05%), Query Frame = 1
Query: 1 SLPTAGTSTLTLASRTGDVLLELEAESIEARDAWVGGLRNLL----------PPXXXXXXXXXXQANKQKHFAMRQLELRDKKREAEARKAKLIEETGGLKYTAIAMANRA 303
S+ G ++T+ S+TGDVLLE+EA RD W+ L +L +A K+ +F RQ ++ K++ EA+KAK ++E GGLKYTA+ MA RA
Sbjct: 15 SIDANGAKSMTVLSKTGDVLLEIEAAEEAQRDLWLTALNEVLLHNFKVMGEDGVVRGQPRNMKERAEKELYFQRRQKDIELKRKSTEAKKAKFMKEAGGLKYTALHMAGRA 125
BLAST of mRNA_P-wetherbeei_contig1356.4.1 vs. uniprot
Match: A0A4D9D2W6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2W6_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 1.440e-10 Identity = 43/111 (38.74%), Postives = 60/111 (54.05%), Query Frame = 1
Query: 1 SLPTAGTSTLTLASRTGDVLLELEAESIEARDAWVGGLRNLL----------PPXXXXXXXXXXQANKQKHFAMRQLELRDKKREAEARKAKLIEETGGLKYTAIAMANRA 303
S+ G ++T+ S+TGDVLLE+EA RD W+ L +L +A K+ +F RQ E+ KK+ EA+KAK ++E GGLKYTA+ MA RA
Sbjct: 94 SIDANGAKSMTVLSKTGDVLLEIEAAEEAQRDLWLTALNEVLLHNFKVMGEDGVVRGQPRNMKERAEKELYFQRRQKEIELKKKITEAKKAKFMKEAGGLKYTALHMAGRA 204
BLAST of mRNA_P-wetherbeei_contig1356.4.1 vs. uniprot
Match: A0A1V9ZP44_9STRA (PH domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZP44_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 5.410e-8 Identity = 45/113 (39.82%), Postives = 57/113 (50.44%), Query Frame = 1
Query: 16 GTSTLTLASRTGDVLLELEAESIEARDAWVGGLRNLLPPXXXXXXXXXX-----------------QANKQKHFAMRQLELRDKKREAEARKAKLIEETGGLKYTAIAMANRA 303
G S+ L S GDVLLEL+AES E R WV L+ + QANKQ ++ RQ EL+ ++ EAE RK K+ G+KYTAIAMANR+
Sbjct: 83 GPSSFQLLSMQGDVLLELDAESAELRTQWVTALQFVCEEVQKEQEANGTTKKAPVTPSSLKQMVKDQANKQAYWHKRQQELKQREAEAEERKKKVG--VAGMKYTAIAMANRS 193
BLAST of mRNA_P-wetherbeei_contig1356.4.1 vs. uniprot
Match: A0A6G0XQB8_9STRA (PH domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQB8_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 5.410e-8 Identity = 43/102 (42.16%), Postives = 54/102 (52.94%), Query Frame = 1
Query: 40 SRTGDVLLELEAESIEARDAWVGGLRNLL---------------PPXXXXXXXXXXQANKQKHFAMRQLELRDKKREAEARKAKLIEETGGLKYTAIAMANR 300
S G+VLLELEAE+ E R WV L+ + P QANKQ ++ RQ EL+ ++EAE RK K+ T G+KYTAIAMANR
Sbjct: 93 SMQGEVLLELEAETAEMRSEWVTALQWICEEVRKNQEINGTAKHPVSSSLKQMVKEQANKQAYWMKRQQELKQLEKEAEERKKKVG--TVGMKYTAIAMANR 192
BLAST of mRNA_P-wetherbeei_contig1356.4.1 vs. uniprot
Match: A0A7R9ZLQ0_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZLQ0_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 5.690e-8 Identity = 30/46 (65.22%), Postives = 38/46 (82.61%), Query Frame = 1
Query: 163 QANKQKHFAMRQLELRDKKREAEARKAKLIEETGGLKYTAIAMANR 300
+A K HFA R+LE+R+ KR E+RKAK I+++GGLKYTAIAMANR
Sbjct: 220 RAKKAAHFARRELEMRETKRTRESRKAKYIQDSGGLKYTAIAMANR 265
BLAST of mRNA_P-wetherbeei_contig1356.4.1 vs. uniprot
Match: K8Z003_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z003_NANGC) HSP 1 Score: 58.2 bits (139), Expect = 6.940e-8 Identity = 40/103 (38.83%), Postives = 56/103 (54.37%), Query Frame = 1
Query: 13 AGTSTLTLASRTGDVLLELEAESIEARDAWVGGLRNLLP---PXXXXXXXXXXQANKQKHFA---MRQLELRDKKREAEARKAKLIEETGGLKYTAIAMANRA 303
+G ++T+ S+TGDVLLE+EA RD W+ L +L Q K A RQ ++ K++ EA+KAK ++E GGLKYTA+ MA RA
Sbjct: 127 SGAKSMTVLSKTGDVLLEIEAAEEAQRDLWLTALNEVLLHNFKVMGEDGVVRGQPRNMKERAEKERRQKDIELKRKSTEAKKAKFMKEAGGLKYTALHMAGRA 229
BLAST of mRNA_P-wetherbeei_contig1356.4.1 vs. uniprot
Match: A0A7S0C0Q8_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C0Q8_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 7.110e-8 Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 1
Query: 163 QANKQKHFAMRQLELRDKKREAEARKAKLIEETGGLKYTAIAMANRA 303
+A K HFA R++EL+ KR+ E RKAK ++E+GGLKYTAIAMANRA
Sbjct: 170 RAEKAAHFAKREIELQKTKRDREKRKAKYLKESGGLKYTAIAMANRA 216 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1356.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1356.4.1 >prot_P-wetherbeei_contig1356.4.1 ID=prot_P-wetherbeei_contig1356.4.1|Name=mRNA_P-wetherbeei_contig1356.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=102bp SLPTAGTSTLTLASRTGDVLLELEAESIEARDAWVGGLRNLLPPPPPLPSback to top mRNA from alignment at P-wetherbeei_contig1356:5758..6779+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1356.4.1 ID=mRNA_P-wetherbeei_contig1356.4.1|Name=mRNA_P-wetherbeei_contig1356.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1022bp|location=Sequence derived from alignment at P-wetherbeei_contig1356:5758..6779+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1356:5758..6779+ >mRNA_P-wetherbeei_contig1356.4.1 ID=mRNA_P-wetherbeei_contig1356.4.1|Name=mRNA_P-wetherbeei_contig1356.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=306bp|location=Sequence derived from alignment at P-wetherbeei_contig1356:5758..6779+ (Phaeothamnion wetherbeei SAG_119_79)back to top |