prot_P-wetherbeei_contig13557.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13557.1.1
Unique Nameprot_P-wetherbeei_contig13557.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length287
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig13557.1.1 vs. uniprot
Match: A0A1F4D8G7_9PROT (Pseudouridine synthase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4D8G7_9PROT)

HSP 1 Score: 314 bits (805), Expect = 8.210e-105
Identity = 156/240 (65.00%), Postives = 186/240 (77.50%), Query Frame = 0 
Query:   18 TQKLQKVLAQSGLGSRRDMELLISGGKVTVNGDVATIGARVGPADQIKVSGRIVRAHSTSRLPRVLLYHKPEGEIASRDDPRGRPSVFERLPALTGAKWISIGRLDFNTCGLLMFTTSGELANRMMHPRFEIEREYAVRVMGKLMQEHVQQLMQGVELDDGVARCERVDLRGGEGANQWCHVVLKEGRNRIVRRLFEKLGFIVSRLMRVRYGPVELPSRVKRNQYYELTGEETQRLLDWL 257
            +QKL KVLAQSGLGSRR ME  I  G+VTVNG VA IG RV P D ++V    VR  +  RLPRVL+YHKPEGEIASRDDP+GRP+VF +LP L GAKW+++GRLD+NTCGLL+FTTSGELANRMMHP F +EREYAVR +G+L  E V +L  G+ LDDG+ARC  V+  GGEGAN W  +VL EGRNR+VRR+FE LG  VSRL+RVR+G + LP R+KR Q  EL  EE  RL++WL
Sbjct:   12 SQKLHKVLAQSGLGSRRAMEQWIRDGRVTVNGIVAGIGTRVTPRDLVRVDKHEVRWPAPRRLPRVLIYHKPEGEIASRDDPQGRPTVFAKLPRLRGAKWLAVGRLDYNTCGLLIFTTSGELANRMMHPSFAVEREYAVRTLGRLSPEQVAKLKSGIMLDDGIARCSAVEDEGGEGANHWYRIVLAEGRNRVVRRMFEALGLTVSRLLRVRFGIISLPPRLKRGQLNELAPEEVARLMEWL 251
[Close]
BLAST of mRNA_P-wetherbeei_contig13557.1.1 vs. uniprot
Match: A0A0S8CAM8_9PROT (Pseudouridine synthase n=1 Tax=Betaproteobacteria bacterium SG8_41 TaxID=1703391 RepID=A0A0S8CAM8_9PROT)

HSP 1 Score: 313 bits (801), Expect = 4.840e-104
Identity = 156/246 (63.41%), Postives = 191/246 (77.64%), Query Frame = 0 
Query:   13 SAPEATQKLQKVLAQSGLGSRRDMELLISGGKVTVNGDVATIGARVGPADQIKVSGRIVRAHSTSRLPRVLLYHKPEGEIASRDDPRGRPSVFERLPALTGAKWISIGRLDFNTCGLLMFTTSGELANRMMHPRFEIEREYAVRVMGKLMQEHVQQLMQGVELDDGVARCERVDLRGGEGANQWCHVVLKEGRNRIVRRLFEKLGFIVSRLMRVRYGPVELPSRVKRNQYYELTGEETQRLLDWLD 258
            S P+ TQKLQKVLA +GLGSRR+ME L+  G+V+VNG  A IG RVGP D IKV G+IVR     RLPRVLLY+KPEGEI SR DP GRPSVF+RLP + GAKW++IGRLDFNT GLL+ TTSGELANRMMHPR+ +EREYAVRV+G L  E + +L  GV LDDGVARC+ +   GGEGAN W H+V++EGR R+VRR+F  +G  VSRL+RVR+G V LP +++R  + EL  +ET+RLL  L+
Sbjct:   18 SGPQGTQKLQKVLADAGLGSRREMEALVQAGQVSVNGSPARIGTRVGPHDLIKVKGKIVRRSLQQRLPRVLLYYKPEGEIVSRADPAGRPSVFDRLPPVRGAKWLTIGRLDFNTSGLLILTTSGELANRMMHPRYALEREYAVRVLGHLRAEELARLAAGVRLDDGVARCDSIQDAGGEGANHWYHLVIREGRKRVVRRMFAAVGHAVSRLIRVRFGSVTLPRQLRRGHFLELAPQETRRLLASLE 263
[Close]
BLAST of mRNA_P-wetherbeei_contig13557.1.1 vs. uniprot
Match: A0A1F4BGF9_9PROT (Pseudouridine synthase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 TaxID=1797492 RepID=A0A1F4BGF9_9PROT)

HSP 1 Score: 311 bits (798), Expect = 2.000e-103
Identity = 155/241 (64.32%), Postives = 190/241 (78.84%), Query Frame = 0 
Query:   17 ATQKLQKVLAQSGLGSRRDMELLISGGKVTVNGDVATIGARVGPADQIKVSGRIVRAHSTSRLPRVLLYHKPEGEIASRDDPRGRPSVFERLPALTGAKWISIGRLDFNTCGLLMFTTSGELANRMMHPRFEIEREYAVRVMGKLMQEHVQQLMQGVELDDGVARCERVDLRGGEGANQWCHVVLKEGRNRIVRRLFEKLGFIVSRLMRVRYGPVELPSRVKRNQYYELTGEETQRLLDWL 257
            AT KLQK LAQ+GLGSRR+ME  I  G+VTVNG  A +GARVG  D + V GRI+R+ +  RLP+VL+YHKPEGEIASRDDP GRPSVF++LP L  AKW+++GRLDFN+ GLL+FTTSGELANRMMHP  E++REYAVRV G+L +E   +L+ G+ L+DG+ARCE V   GGEGAN+W  VVL+EGRNRIVRRLF+ LG  +SRLMRVR+GPV LP R++R Q  EL   E ++LL  L
Sbjct:   12 ATYKLQKALAQAGLGSRREMEQWIQAGRVTVNGVKARLGARVGAQDVVMVDGRILRSAAPERLPQVLIYHKPEGEIASRDDPAGRPSVFDKLPRLRDAKWVAVGRLDFNSSGLLLFTTSGELANRMMHPSHELDREYAVRVRGRLTEEQGARLLSGIRLEDGMARCESVSTEGGEGANRWYRVVLREGRNRIVRRLFDALGLSISRLMRVRFGPVVLPPRLRRGQILELAPAEVRQLLTTL 252
[Close]
BLAST of mRNA_P-wetherbeei_contig13557.1.1 vs. uniprot
Match: A0A1H3LQ28_9PROT (Pseudouridine synthase n=2 Tax=Nitrosomonas sp. Nm33 TaxID=133724 RepID=A0A1H3LQ28_9PROT)

HSP 1 Score: 309 bits (792), Expect = 1.290e-102
Identity = 149/245 (60.82%), Postives = 195/245 (79.59%), Query Frame = 0 
Query:   14 APEATQKLQKVLAQSGLGSRRDMELLISGGKVTVNGDVATIGARVGPADQIKVSGRIVRAHSTSRLPRVLLYHKPEGEIASRDDPRGRPSVFERLPALTGAKWISIGRLDFNTCGLLMFTTSGELANRMMHPRFEIEREYAVRVMGKLMQEHVQQLMQGVELDDGVARCERVDLRGGEGANQWCHVVLKEGRNRIVRRLFEKLGFIVSRLMRVRYGPVELPSRVKRNQYYELTGEETQRLLDWLD 258
            AP  T KLQK+LAQSGLGSRR+ME LI+ G+V++NG VA +G RVG  D ++V+ RI+R +   RLPR++LYHKPEGEI SR DP GRPSVF++LP L  ++WI+IGRLDFNT GLL+FTT+G LANR+MHPRF++EREYAVR++G+L  E   QL+ GVEL+DG+A+   +  +GGEGAN+W HV+LKEGRNR VRRLFE LG  VSRL+R+R+GP+ LP R+KR  +++L   ET  LL+ ++
Sbjct:   10 APMVTHKLQKLLAQSGLGSRREMEALIASGQVSINGKVAKLGDRVGSRDLVRVNRRIIRININERLPRIILYHKPEGEIVSRHDPEGRPSVFDKLPQLKSSRWIAIGRLDFNTSGLLIFTTNGVLANRLMHPRFQVEREYAVRIVGRLTPEQKSQLLTGVELEDGLAKFSDLSEQGGEGANRWYHVILKEGRNREVRRLFEALGLTVSRLIRIRFGPIHLPPRLKRGMWHQLDENETAYLLELVN 254
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BLAST of mRNA_P-wetherbeei_contig13557.1.1 vs. uniprot
Match: A0A8I1PUD6_9PROT (Pseudouridine synthase n=1 Tax=Nitrosospira sp. TaxID=38080 RepID=A0A8I1PUD6_9PROT)

HSP 1 Score: 310 bits (794), Expect = 2.370e-102
Identity = 149/245 (60.82%), Postives = 196/245 (80.00%), Query Frame = 0 
Query:   17 ATQKLQKVLAQSGLGSRRDMELLISGGKVTVNGDVATIGARVGPADQIKVSGRIVRAHSTSRLPRVLLYHKPEGEIASRDDPRGRPSVFERLPALTGAKWISIGRLDFNTCGLLMFTTSGELANRMMHPRFEIEREYAVRVMGKLMQEHVQQLMQGVELDDGVARCERVDLRGGEGANQWCHVVLKEGRNRIVRRLFEKLGFIVSRLMRVRYGPVELPSRVKRNQYYELTGEETQRLLDWLDAAQ 261
            AT KLQK+LAQ+GLGSRR+ME LI+ G+ T+NG +A IG RVGP D +++  R++    +  LPRV++YHKPEGEI SRDDP+GRPSVF+RLP L  +KWI+IGRLD+NT GLL+FTT+GELANR+MHPRFE+EREYAVR++G+L  E V++L  G+EL+DG+AR +++  +GGEG+N W  VVLKEGRNR VRR+FE +G  VSRLMRVR+GP+ LP R+KR ++ EL   E +RLL  ++  Q
Sbjct:   65 ATHKLQKLLAQAGLGSRREMEELIAAGQATINGKIAKIGDRVGPEDVVRLGKRVIHFRRSGTLPRVMIYHKPEGEIVSRDDPQGRPSVFDRLPQLRSSKWIAIGRLDYNTSGLLIFTTNGELANRLMHPRFEVEREYAVRIIGRLTPEAVERLTAGIELEDGLARFDQLSDQGGEGSNHWYRVVLKEGRNREVRRMFESVGMAVSRLMRVRFGPINLPPRLKRGKWMELDEVEARRLLALVEGNQ 309
[Close]
BLAST of mRNA_P-wetherbeei_contig13557.1.1 vs. uniprot
Match: UPI001BC197BD (Pseudouridine synthase n=1 Tax=Sulfuricella sp. TaxID=2099377 RepID=UPI001BC197BD)

HSP 1 Score: 310 bits (794), Expect = 6.790e-102
Identity = 149/241 (61.83%), Postives = 190/241 (78.84%), Query Frame = 0 
Query:   16 EATQKLQKVLAQSGLGSRRDMELLISGGKVTVNGDVATIGARVGPADQIKVSGRIVRAHSTSRLPRVLLYHKPEGEIASRDDPRGRPSVFERLPALTGAKWISIGRLDFNTCGLLMFTTSGELANRMMHPRFEIEREYAVRVMGKLMQEHVQQLMQGVELDDGVARCERVDLRGGEGANQWCHVVLKEGRNRIVRRLFEKLGFIVSRLMRVRYGPVELPSRVKRNQYYELTGEETQRLLDW 256
            + T KLQKVLAQ+GLGSRRDME LI  G+VTVNG VA +G RV   D I+ +GRI+R  S  RLPRV+LYHKPEGEI SRDDP GR SVFER+P L  + W+S+GRLDFNT GLL+FTTSGELANR+ HPRFE+EREYAVR++G++  E + +L  G+EL+DG+A+ + +  +GGEG+N W  V+++EGRNR VRRLFE +G +VSRLMRVR+G + LP+R+KR Q+ EL  EE  ++L W
Sbjct:   53 DGTSKLQKVLAQAGLGSRRDMEELIKSGRVTVNGQVAELGMRVTSEDSIRANGRILRLRSADRLPRVMLYHKPEGEIVSRDDPEGRTSVFERIPILASSWWVSVGRLDFNTSGLLIFTTSGELANRLTHPRFEVEREYAVRLLGEMSTEQIAKLKAGIELEDGLAKFDAIMEQGGEGSNHWYRVIIREGRNREVRRLFEAVGMMVSRLMRVRFGAINLPTRLKRGQWVELGSEEVVQILKW 293
[Close]
BLAST of mRNA_P-wetherbeei_contig13557.1.1 vs. uniprot
Match: UPI00199AB792 (Pseudouridine synthase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI00199AB792)

HSP 1 Score: 308 bits (789), Expect = 1.150e-101
Identity = 154/239 (64.44%), Postives = 187/239 (78.24%), Query Frame = 0 
Query:   18 TQKLQKVLAQSGLGSRRDMELLISGGKVTVNGDVATIGARVGPADQIKVSGRIVRAHSTSRLPRVLLYHKPEGEIASRDDPRGRPSVFERLPALTGAKWISIGRLDFNTCGLLMFTTSGELANRMMHPRFEIEREYAVRVMGKLMQEHVQQLMQGVELDDGVARCERVDLRGGEGANQWCHVVLKEGRNRIVRRLFEKLGFIVSRLMRVRYGPVELPSRVKRNQYYELTGEETQRLLDW 256
            +QKL K+LAQ+GLGSRR+ME LI  G+V+VNG  A +G RV   D ++V  RIVR  S  RLPRVLLYHKPE EI SRDDP GR SVF++LP + GAKWI+IGRLD+N+CGLLMFTTSGELANR MHPRFE+EREYAVR++G+L  EH +QL+ GV+L+DG A+   +  +GGE  N+W HVVL+EGR R+VRR+FE LGF VSRLMRVR+GPV LP R+KR    EL  +E Q LL W
Sbjct:   15 SQKLHKLLAQAGLGSRREMETLIVAGRVSVNGKPAGVGERVSGGDVVRVDKRIVRFKSAHRLPRVLLYHKPENEIVSRDDPEGRASVFDKLPPIRGAKWIAIGRLDYNSCGLLMFTTSGELANRFMHPRFEVEREYAVRIVGELAPEHFRQLLGGVQLEDGEAKFASLFEQGGEATNRWYHVVLQEGRKRVVRRMFEALGFTVSRLMRVRFGPVVLPPRLKRCALRELETQEVQELLVW 253
[Close]
BLAST of mRNA_P-wetherbeei_contig13557.1.1 vs. uniprot
Match: A0A0F7KIN1_9PROT (Pseudouridine synthase n=3 Tax=Nitrosomonas TaxID=914 RepID=A0A0F7KIN1_9PROT)

HSP 1 Score: 307 bits (786), Expect = 1.620e-101
Identity = 148/237 (62.45%), Postives = 189/237 (79.75%), Query Frame = 0 
Query:   18 TQKLQKVLAQSGLGSRRDMELLISGGKVTVNGDVATIGARVGPADQIKVSGRIVRAHSTSRLPRVLLYHKPEGEIASRDDPRGRPSVFERLPALTGAKWISIGRLDFNTCGLLMFTTSGELANRMMHPRFEIEREYAVRVMGKLMQEHVQQLMQGVELDDGVARCERVDLRGGEGANQWCHVVLKEGRNRIVRRLFEKLGFIVSRLMRVRYGPVELPSRVKRNQYYELTGEETQRLL 254
            T KL K+LAQSGLGSRR+ME LI+ G+V++NG  A +G RVG  D ++V+ RI+R ++  RLPR++LYHKPEGEI SR DP GRPSVFE+LP L  ++W++IGRLDFNT GLL+FTT+G LANR+MHPRF++EREYAVR++G+L  E   QL+ GVEL+DG+A+   +  +GGEGAN+W HVVLKEGRNR VRRLFE LG  VSRL+RVR+GP+ LP R+KR  ++EL   ET  LL
Sbjct:   31 THKLHKLLAQSGLGSRREMEALIASGQVSINGKSAKLGDRVGARDLVRVNKRIIRLNTNERLPRIILYHKPEGEIVSRHDPEGRPSVFEKLPQLKSSRWVAIGRLDFNTSGLLIFTTNGVLANRLMHPRFQVEREYAVRIIGRLTPEQKSQLLMGVELEDGLAKLSDLSEQGGEGANRWYHVVLKEGRNREVRRLFEALGLTVSRLIRVRFGPIHLPPRLKRGMWHELDENETANLL 267
[Close]
BLAST of mRNA_P-wetherbeei_contig13557.1.1 vs. uniprot
Match: A0A286C6W4_9PROT (Pseudouridine synthase n=2 Tax=unclassified Nitrosovibrio TaxID=2624428 RepID=A0A286C6W4_9PROT)

HSP 1 Score: 307 bits (786), Expect = 2.430e-101
Identity = 151/245 (61.63%), Postives = 190/245 (77.55%), Query Frame = 0 
Query:   11 PPSAPEATQKLQKVLAQSGLGSRRDMELLISGGKVTVNGDVATIGARVGPADQIKVSGRIVRAHSTSRLPRVLLYHKPEGEIASRDDPRGRPSVFERLPALTGAKWISIGRLDFNTCGLLMFTTSGELANRMMHPRFEIEREYAVRVMGKLMQEHVQQLMQGVELDDGVARCERVDLRGGEGANQWCHVVLKEGRNRIVRRLFEKLGFIVSRLMRVRYGPVELPSRVKRNQYYELTGEETQRLLD 255
            P S P  TQKL K+LAQ+GLGSRR+ME LI+ G+ T+NG +A IG RVGP D ++V  R +   S+ RLPRV+LYHKPEGEI SRDDP+ RPSVF++LP L  +KWI+IGRLD+NT GLL+FTT GELANR+MHPRFE+EREYAVR+MG+L  E  ++L  GVEL+DG A+ + +   GGEG+N W  V+LKEGRNR VRR+FE +G  VSRLMRVR+GP+ LP R+KR ++ EL   E  RLL+
Sbjct:   48 PASPPAKTQKLHKLLAQAGLGSRREMEELIAAGQATINGKIANIGDRVGPEDIVRVGKRTIHLKSSGRLPRVMLYHKPEGEIVSRDDPQDRPSVFDKLPQLRSSKWIAIGRLDYNTSGLLIFTTDGELANRLMHPRFEVEREYAVRIMGRLTPEVAERLTTGVELEDGPAKFDYLSDEGGEGSNHWYRVILKEGRNREVRRMFETVGMTVSRLMRVRFGPINLPPRLKRGKWMELDETEITRLLE 292
[Close]
BLAST of mRNA_P-wetherbeei_contig13557.1.1 vs. uniprot
Match: A0A7V9CJ14_9BURK (Pseudouridine synthase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7V9CJ14_9BURK)

HSP 1 Score: 307 bits (787), Expect = 2.470e-101
Identity = 154/239 (64.44%), Postives = 186/239 (77.82%), Query Frame = 0 
Query:   18 TQKLQKVLAQSGLGSRRDMELLISGGKVTVNGDVATIGARVGPADQIKVSGRIVRAHSTSRLPRVLLYHKPEGEIASRDDPRGRPSVFERLPALTGAKWISIGRLDFNTCGLLMFTTSGELANRMMHPRFEIEREYAVRVMGKLMQEHVQQLMQGVELDDGVARCERVDLRGGEGANQWCHVVLKEGRNRIVRRLFEKLGFIVSRLMRVRYGPVELPSRVKRNQYYELTGEETQRLLDW 256
            TQKL K+LAQ+GLGSRR+ME LI+ G+V+VNG  A +G RV   D ++V  RIVR  S  RLPRVLLYHKPE EI SRDDP GR SVF+ LP + GAKWI+IGRLD+N+CGLLMFTTSGELAN  MHPRFE+EREYAVR++G+L  EH +QL+ GV+L+DG A+   +  +GGE  N+W HVVL+EGR R+VRR+FE LGF VSRLMRVR+GPV LP R+KR    EL  +E Q LL W
Sbjct:   15 TQKLHKLLAQAGLGSRREMETLIAAGRVSVNGKPAGVGERVSGEDTVRVDKRIVRFKSAHRLPRVLLYHKPENEIVSRDDPEGRASVFDNLPPIRGAKWIAIGRLDYNSCGLLMFTTSGELANLFMHPRFEVEREYAVRILGELTPEHFRQLLGGVQLEDGEAKFASLFEQGGEATNRWYHVVLQEGRKRLVRRMFEALGFTVSRLMRVRFGPVVLPPRLKRCALRELETQEVQELLVW 253
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13557.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F4D8G7_9PROT8.210e-10565.00Pseudouridine synthase n=1 Tax=Betaproteobacteria ... [more]
A0A0S8CAM8_9PROT4.840e-10463.41Pseudouridine synthase n=1 Tax=Betaproteobacteria ... [more]
A0A1F4BGF9_9PROT2.000e-10364.32Pseudouridine synthase n=1 Tax=Betaproteobacteria ... [more]
A0A1H3LQ28_9PROT1.290e-10260.82Pseudouridine synthase n=2 Tax=Nitrosomonas sp. Nm... [more]
A0A8I1PUD6_9PROT2.370e-10260.82Pseudouridine synthase n=1 Tax=Nitrosospira sp. Ta... [more]
UPI001BC197BD6.790e-10261.83Pseudouridine synthase n=1 Tax=Sulfuricella sp. Ta... [more]
UPI00199AB7921.150e-10164.44Pseudouridine synthase n=1 Tax=Burkholderiales bac... [more]
A0A0F7KIN1_9PROT1.620e-10162.45Pseudouridine synthase n=3 Tax=Nitrosomonas TaxID=... [more]
A0A286C6W4_9PROT2.430e-10161.63Pseudouridine synthase n=2 Tax=unclassified Nitros... [more]
A0A7V9CJ14_9BURK2.470e-10164.44Pseudouridine synthase n=1 Tax=Burkholderiales bac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 19..76
e-value: 1.4E-5
score: 34.5
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 20..64
e-value: 6.6E-10
score: 38.5
IPR002942RNA-binding S4 domainCDDcd00165S4coord: 19..86
e-value: 1.53046E-9
score: 51.4814
IPR006145Pseudouridine synthase, RsuA/RluA-likePFAMPF00849PseudoU_synth_2coord: 82..214
e-value: 3.2E-13
score: 50.1
IPR020094Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminalGENE3D3.30.70.580coord: 83..249
e-value: 2.2E-45
score: 156.2
IPR042092Pseudouridine synthase, RsuA/RluB/E/F, catalytic domainGENE3D3.30.70.1560coord: 149..232
e-value: 2.2E-45
score: 156.2
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 14..73
e-value: 4.7E-18
score: 66.3
IPR000748Pseudouridine synthase, RsuA/RluB/E/FTIGRFAMTIGR00093TIGR00093coord: 86..246
e-value: 3.8E-48
score: 161.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..286
NoneNo IPR availablePANTHERPTHR21600:SF65RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 13..258
NoneNo IPR availablePANTHERPTHR21600MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASEcoord: 13..258
NoneNo IPR availablePROSITEPS50889S4coord: 19..88
score: 12.827653
NoneNo IPR availableCDDcd02556PseudoU_synth_RluBcoord: 81..246
e-value: 2.60529E-84
score: 248.377
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 21..109
IPR018496Pseudouridine synthase, RsuA/RluB/E/F, conserved sitePROSITEPS01149PSI_RSUcoord: 120..134
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 81..250

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13557contigP-wetherbeei_contig13557:254..1114 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13557.1.1mRNA_P-wetherbeei_contig13557.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13557 254..1114 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13557.1.1 ID=prot_P-wetherbeei_contig13557.1.1|Name=mRNA_P-wetherbeei_contig13557.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=287bp
AASRGGRRAAPPSAPEATQKLQKVLAQSGLGSRRDMELLISGGKVTVNGD
VATIGARVGPADQIKVSGRIVRAHSTSRLPRVLLYHKPEGEIASRDDPRG
RPSVFERLPALTGAKWISIGRLDFNTCGLLMFTTSGELANRMMHPRFEIE
REYAVRVMGKLMQEHVQQLMQGVELDDGVARCERVDLRGGEGANQWCHVV
LKEGRNRIVRRLFEKLGFIVSRLMRVRYGPVELPSRVKRNQYYELTGEET
QRLLDWLDAAQQPQPTEAPATPGQTPRREPGRRARE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002942S4_RNA-bd
IPR006145PsdUridine_synth_RsuA/RluA
IPR020094TruA/RsuA/RluB/E/F_N
IPR042092PsdUridine_s_RsuA/RluB/E/F_cat
IPR036986S4_RNA-bd_sf
IPR000748PsdUridine_synth_RsuA/RluB/E/F
IPR018496PsdUridine_synth_RsuA/RluB_CS
IPR020103PsdUridine_synth_cat_dom_sf