mRNA_P-wetherbeei_contig13544.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13544.1.1 vs. uniprot
Match: A0A662YBH9_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YBH9_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.330e-23 Identity = 69/157 (43.95%), Postives = 86/157 (54.78%), Query Frame = 1
Query: 1 SVAARLGLRLRLGSLLMGQGKLEAARQVYLDAVKDSCHPESQRGGWSAPAPFNSMDAWLGVGVASLRLELWQDAEAALQTATRIDPTRPAPWGYLALLLLFMTAAI-----DGAEAMLRQALRLGLTDPALLRELACALVALGRLPPAEDLLRRSLS 456
S A RL L LRLG L+ + EAA +L A + F WLGVG+ASLRLE W+ A+ AL A R+D T P WGYLAL +L A+ + + QALR L++PALLREL+ A VA+ RL AE LLRRSL+
Sbjct: 956 SEAQRLALYLRLGLALLNSSQFEAAEATFLQAGDE----------------FRVASTWLGVGIASLRLERWERAQMALAEANRLDATNPDVWGYLALFVLSAHNAVTPRDEQEGQQFVAQALRHNLSNPALLRELSNAFVAIDRLESAEKLLRRSLA 1096
BLAST of mRNA_P-wetherbeei_contig13544.1.1 vs. uniprot
Match: A0A6A3NWB4_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NWB4_9STRA) HSP 1 Score: 104 bits (259), Expect = 4.580e-23 Identity = 66/153 (43.14%), Postives = 86/153 (56.21%), Query Frame = 1
Query: 13 RLGLRLRLGSLLMGQGKLEAARQVYLDAVKDSCHPESQRGGWSAPAPFNSMDAWLGVGVASLRLELWQDAEAALQTATRIDPTRPAPWGYLALLLLFMTAAIDG-----AEAMLRQALRLGLTDPALLRELACALVALGRLPPAEDLLRRSLS 456
RLGL LRLG L+ + EAA +L A + F WLGVG+A +RLE W+ A+ AL A ++DP+ P W YLALL L ++ G A+ + QALR L++PALLREL+ A VA+ RL AE LLRRSL+
Sbjct: 940 RLGLYLRLGLALLHSQQFEAAETTFLLACDE----------------FRVASCWLGVGIACVRLEKWERAQMALSEANKLDPSNPDVWAYLALLALTAHGSVSGHDEKDAQQFVSQALRHNLSNPALLRELSNAFVAIDRLETAEKLLRRSLA 1076
BLAST of mRNA_P-wetherbeei_contig13544.1.1 vs. uniprot
Match: G4YFL2_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YFL2_PHYSP) HSP 1 Score: 103 bits (256), Expect = 1.160e-22 Identity = 66/153 (43.14%), Postives = 85/153 (55.56%), Query Frame = 1
Query: 13 RLGLRLRLGSLLMGQGKLEAARQVYLDAVKDSCHPESQRGGWSAPAPFNSMDAWLGVGVASLRLELWQDAEAALQTATRIDPTRPAPWGYLALLLLFMTAAID-----GAEAMLRQALRLGLTDPALLRELACALVALGRLPPAEDLLRRSLS 456
RLGL LRLG L+ ++E A +L A + F WLGVG+A LRLE W+ A+ AL A R+DP+ P W YLALL L ++ A+ + QALR L++PALLREL+ A VA+ RL AE LLRRSL+
Sbjct: 912 RLGLYLRLGLALLHSQQIEVAETTFLLACDE----------------FRVASCWLGVGIACLRLEKWERAQMALSEANRLDPSNPDVWAYLALLALTAHGSVSVRDEKDAQQFVSQALRHNLSNPALLRELSNAFVAIDRLESAEKLLRRSLA 1048
BLAST of mRNA_P-wetherbeei_contig13544.1.1 vs. uniprot
Match: A0A6H5KT48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT48_9PHAE) HSP 1 Score: 100 bits (249), Expect = 1.030e-21 Identity = 70/160 (43.75%), Postives = 89/160 (55.62%), Query Frame = 1
Query: 16 LGLRLRLGSLLMGQGKLEAAR------------QVYLDAVKDSCHPESQRGGWSAPAPFNSMDAWLGVGVASLRLELWQDAEAALQTATRIDPTRPAPWGYLALLLLFM-TAAIDGAEAMLRQALRLGLTDPALLRELACALVALGRLPPAEDLLRRSLS 456
L + +RLGSL G++E A+ AV +C + R W AP P WLG G A LRLE WQ+AE ALQ A+R+D P WG+LALLLL M + A+ L QAL LGL D +LLRE+ VA+GRL AE+ LR+SL+
Sbjct: 1161 LRVYMRLGSLYNTLGRIEEAKVGKGAYNSVGPVNFEYAAVVKACFLRACRA-WRAPGP------WLGCGAACLRLEQWQEAEDALQHASRLDCNSPLVWGHLALLLLSMGEGRLQEADRALSQALCLGLADSSLLREIGNCYVAVGRLDAAEEALRKSLA 1313
BLAST of mRNA_P-wetherbeei_contig13544.1.1 vs. uniprot
Match: A0A225VBK0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VBK0_9STRA) HSP 1 Score: 100 bits (248), Expect = 1.370e-21 Identity = 66/155 (42.58%), Postives = 84/155 (54.19%), Query Frame = 1
Query: 7 AARLGLRLRLGSLLMGQGKLEAARQVYLDAVKDSCHPESQRGGWSAPAPFNSMDAWLGVGVASLRLELWQDAEAALQTATRIDPTRPAPWGYLALLLLFMTAAI-----DGAEAMLRQALRLGLTDPALLRELACALVALGRLPPAEDLLRRSLS 456
A RLGL LRLG L+ + E A ++L A + F WLGVG+ASLRLE ++ A+ AL A R+D T P WGYLALL L + A+ + QALR L++P LLREL+ A VA+ RL E LLRRSL+
Sbjct: 876 ALRLGLYLRLGLALLHSSQFETADAIFLLACNE----------------FRVASCWLGVGIASLRLEKYERAQIALAEANRLDSTNPDVWGYLALLALTTHTTVVVRDEKDAQQFVSQALRHNLSNPGLLRELSNAFVAIDRLESGEKLLRRSLA 1014
BLAST of mRNA_P-wetherbeei_contig13544.1.1 vs. uniprot
Match: A0A329SMS4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SMS4_9STRA) HSP 1 Score: 100 bits (248), Expect = 1.380e-21 Identity = 66/155 (42.58%), Postives = 84/155 (54.19%), Query Frame = 1
Query: 7 AARLGLRLRLGSLLMGQGKLEAARQVYLDAVKDSCHPESQRGGWSAPAPFNSMDAWLGVGVASLRLELWQDAEAALQTATRIDPTRPAPWGYLALLLLFMTAAID-----GAEAMLRQALRLGLTDPALLRELACALVALGRLPPAEDLLRRSLS 456
A RLGL L+LG L+ + E A +L A + F WLGVG+A LRLE W+ AE AL A R+D + P WGY ALL L ++ A+ + QALR L++PALLREL+ A VA+ RL AE LLRRSL+
Sbjct: 937 ALRLGLYLQLGLALLHSSQFETAEATFLLACDE----------------FRIASCWLGVGIACLRLERWERAEMALAEANRLDSSNPDVWGYRALLSLTSHTSVSVRDEKDAQQFVSQALRHNLSNPALLRELSNAFVAIDRLESAEKLLRRSLA 1075
BLAST of mRNA_P-wetherbeei_contig13544.1.1 vs. uniprot
Match: A0A0P1B2J0_PLAHL (Tetratricopeptide repeat-containing domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B2J0_PLAHL) HSP 1 Score: 99.4 bits (246), Expect = 2.570e-21 Identity = 69/157 (43.95%), Postives = 88/157 (56.05%), Query Frame = 1
Query: 1 SVAARLGLRLRLGSLLMGQGKLEAARQVYLDAVKDSCHPESQRGGWSAPAPFNSMDAWLGVGVASLRLELWQDAEAALQTATRIDPTRPAPWGYLALLLLFM---TAAIDGAEAM--LRQALRLGLTDPALLRELACALVALGRLPPAEDLLRRSLS 456
S A+RLGL LRLG L+ + E A V+L A F WLGVG+A+LRLE W+ A+ AL A R+D + P WGYLALL L + D +AM + +AL +++PALLREL+ A VA+ RL AE LLRRSLS
Sbjct: 927 SDASRLGLYLRLGLALLHSSQFEKADAVFLFACDK----------------FRVASCWLGVGIANLRLEKWERAQMALAEANRLDHSNPDVWGYLALLALTAHTSKSTCDEKDAMQFISKALEHNVSNPALLRELSNAFVAIDRLESAERLLRRSLS 1067
BLAST of mRNA_P-wetherbeei_contig13544.1.1 vs. uniprot
Match: D8LNE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNE3_ECTSI) HSP 1 Score: 99.4 bits (246), Expect = 2.620e-21 Identity = 65/148 (43.92%), Postives = 85/148 (57.43%), Query Frame = 1
Query: 16 LGLRLRLGSLLMGQGKLEAARQVYLDAVKDSCHPESQRGGWSAPAPFNSMDAWLGVGVASLRLELWQDAEAALQTATRIDPTRPAPWGYLALLLLFMTA-AIDGAEAMLRQALRLGLTDPALLRELACALVALGRLPPAEDLLRRSLS 456
L + +RLGSL G++E A+ +L A + W AP P WLG G A +RLE WQ+AE A+Q A+R+D WG+LALLLL M + A+ L QAL LGL D +LLRE+ VA GRL AE+ LR+SL+
Sbjct: 1216 LRVYMRLGSLYNTLGRVEEAKACFLRACR----------AWRAPGP------WLGCGAACMRLEQWQEAEDAMQHASRLDCNSSLVWGHLALLLLSMGEDRLQEADRALSQALCLGLADSSLLREIGNCYVAAGRLDAAEEALRKSLA 1347
BLAST of mRNA_P-wetherbeei_contig13544.1.1 vs. uniprot
Match: A0A0W8DXD5_PHYNI (Tetratricopeptide repeat protein 18 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DXD5_PHYNI) HSP 1 Score: 97.4 bits (241), Expect = 1.210e-20 Identity = 64/155 (41.29%), Postives = 83/155 (53.55%), Query Frame = 1
Query: 7 AARLGLRLRLGSLLMGQGKLEAARQVYLDAVKDSCHPESQRGGWSAPAPFNSMDAWLGVGVASLRLELWQDAEAALQTATRIDPTRPAPWGYLALLLLFMTAAI-----DGAEAMLRQALRLGLTDPALLRELACALVALGRLPPAEDLLRRSLS 456
A R GL LRLG L+ + E A +L + F WLGVG+A LRLE W+ A+ AL A R+D + P WGYLAL L A++ A+ + QA+R L++PALLREL+ A VA+ RL AE LLRRSL+
Sbjct: 934 ALRFGLYLRLGLALLHSSQFETAETTFLLGCDE----------------FRLASCWLGVGIACLRLERWERAQMALAEANRLDSSNPDVWGYLALHSLTAHASVRVRDEKDAQQFVAQAIRHNLSNPALLRELSNAFVAIDRLESAEKLLRRSLA 1072
BLAST of mRNA_P-wetherbeei_contig13544.1.1 vs. uniprot
Match: H3HD72_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HD72_PHYRM) HSP 1 Score: 92.4 bits (228), Expect = 6.690e-19 Identity = 54/99 (54.55%), Postives = 66/99 (66.67%), Query Frame = 1
Query: 172 WLGVGVASLRLELWQDAEAALQTATRIDPTRPAPWGYLALLLL-----FMTAAIDGAEAMLRQALRLGLTDPALLRELACALVALGRLPPAEDLLRRSL 453
WLGVG+A+LRLE W+ A+ AL A R+DP+ P WGYLALL L F A+ + QALR L++PALLREL+ A VA+ RL AE LLRRSL
Sbjct: 864 WLGVGIATLRLERWERAQMALAEANRLDPSNPDVWGYLALLALTAHTSFSARDEKDAQQFVAQALRHNLSNPALLRELSNAFVAIDRLERAEKLLRRSL 962 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13544.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13544.1.1 >prot_P-wetherbeei_contig13544.1.1 ID=prot_P-wetherbeei_contig13544.1.1|Name=mRNA_P-wetherbeei_contig13544.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=152bp SVAARLGLRLRLGSLLMGQGKLEAARQVYLDAVKDSCHPESQRGGWSAPAback to top mRNA from alignment at P-wetherbeei_contig13544:401..997- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13544.1.1 ID=mRNA_P-wetherbeei_contig13544.1.1|Name=mRNA_P-wetherbeei_contig13544.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=597bp|location=Sequence derived from alignment at P-wetherbeei_contig13544:401..997- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13544:401..997- >mRNA_P-wetherbeei_contig13544.1.1 ID=mRNA_P-wetherbeei_contig13544.1.1|Name=mRNA_P-wetherbeei_contig13544.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=456bp|location=Sequence derived from alignment at P-wetherbeei_contig13544:401..997- (Phaeothamnion wetherbeei SAG_119_79)back to top |