prot_P-wetherbeei_contig1353.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1353.2.1
Unique Nameprot_P-wetherbeei_contig1353.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length224
Homology
BLAST of mRNA_P-wetherbeei_contig1353.2.1 vs. uniprot
Match: D7G9H7_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9H7_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 7.380e-11
Identity = 28/50 (56.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:  133 NCSICLTCFAQQDRCTRITCGHVFHEACVDVWLEAHRTCPLCTVDLDDLA 182
            +CS+CL  + + D   ++TCGHVFH AC+D WL+AHR CP C  DLD LA
Sbjct:  192 SCSVCLDDYEEGDELLQVTCGHVFHRACIDHWLKAHRVCPCCRTDLDKLA 241          
BLAST of mRNA_P-wetherbeei_contig1353.2.1 vs. uniprot
Match: A0A6H5JXK0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK0_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 1.890e-10
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:  133 NCSICLTCFAQQDRCTRITCGHVFHEACVDVWLEAHRTCPLCTVDLDDLA 182
            +CS+CL  + + D   ++TCGHVFH AC+D WL AHR CP C  DLD LA
Sbjct:  272 SCSVCLDDYEEGDELLQVTCGHVFHRACIDHWLMAHRVCPCCRTDLDKLA 321          
BLAST of mRNA_P-wetherbeei_contig1353.2.1 vs. uniprot
Match: A0A4S8J7D7_MUSBA (RING-type E3 ubiquitin transferase n=2 Tax=Musa TaxID=4640 RepID=A0A4S8J7D7_MUSBA)

HSP 1 Score: 63.9 bits (154), Expect = 7.080e-9
Identity = 29/59 (49.15%), Postives = 38/59 (64.41%), Query Frame = 0
Query:  127 EDGEGANCSICLTCFAQQDRCTRI-TCGHVFHEACVDVWLEAHRTCPLCTVDLDDLAIA 184
            E GE A CSICL+   + D+   + +CGH FH  CVD WL+AH +CPLC   L D ++A
Sbjct:  143 EAGEEAQCSICLSSLTEGDKVKVLPSCGHTFHVECVDEWLKAHTSCPLCRASLADSSVA 201          
BLAST of mRNA_P-wetherbeei_contig1353.2.1 vs. uniprot
Match: A0A0E0DB49_9ORYZ (RING-type domain-containing protein n=1 Tax=Oryza meridionalis TaxID=40149 RepID=A0A0E0DB49_9ORYZ)

HSP 1 Score: 62.0 bits (149), Expect = 1.040e-8
Identity = 31/59 (52.54%), Postives = 36/59 (61.02%), Query Frame = 0
Query:  129 GEGA-NCSICLTCFAQQDR--CTRITCGHVFHEACVDVWLEAHRTCPLCTVDLDDLAIA 184
            G GA  C++CL  FA      C    C HVFH AC+DVWL AH TCP+C  DL D A+A
Sbjct:   68 GHGALKCAVCLAEFADDGEKLCLLPGCCHVFHTACIDVWLAAHVTCPVCRADLADRAVA 126          
BLAST of mRNA_P-wetherbeei_contig1353.2.1 vs. uniprot
Match: A0A0D3E6X5_BRAOL (RING-type domain-containing protein n=8 Tax=Brassiceae TaxID=981071 RepID=A0A0D3E6X5_BRAOL)

HSP 1 Score: 64.3 bits (155), Expect = 1.130e-8
Identity = 34/85 (40.00%), Postives = 48/85 (56.47%), Query Frame = 0
Query:  102 PTANLAVNENVAPSSSLVPVSLVGN--EDGEGANCSICLTCFAQQDRCTRI--TCGHVFHEACVDVWLEAHRTCPLCTVDLDDLA 182
            P  N  + + +  S  L P S V N  ED  G  C+ICL  F ++    R+   C HVFH+ C+D WLE+++TCP+C  +LD  A
Sbjct:   77 PPVNPGLEQQIIQSFPLFPFSSVKNLREDKHGLECAICLLEFEEEHVLLRLLTNCYHVFHQECIDRWLESNKTCPVCRRNLDPTA 161          
BLAST of mRNA_P-wetherbeei_contig1353.2.1 vs. uniprot
Match: A0A6G1CS14_9ORYZ (RING-type domain-containing protein n=1 Tax=Oryza meyeriana var. granulata TaxID=110450 RepID=A0A6G1CS14_9ORYZ)

HSP 1 Score: 63.2 bits (152), Expect = 1.150e-8
Identity = 38/108 (35.19%), Postives = 52/108 (48.15%), Query Frame = 0
Query:   85 ATPMMTEACVRRQQLCSPTANLAVNENVAPSSSLVPVSLVGNEDGEGANCSICLTCFAQQDRCTRI--TCGHVFHEACVDVWLEAHRTCPLCTVDLDDLAIAKRLDAA 190
            + P      VRR   C  TA      +  P+ +  P +    E G G  C++CL    Q     R+  +CGH+FH  C+D+WL AHRTCPLC  DL    +  +  AA
Sbjct:   85 SAPAAVRLQVRRCASCGLTAQAI---DALPTFAYEPPTTAEKEGGGGVLCAVCLE-DVQGGETVRMLPSCGHLFHVDCIDMWLHAHRTCPLCRRDLSPRKVTAKASAA 188          
BLAST of mRNA_P-wetherbeei_contig1353.2.1 vs. uniprot
Match: UPI000B8CA77C (RING-H2 finger protein ATL29-like n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CA77C)

HSP 1 Score: 64.7 bits (156), Expect = 1.250e-8
Identity = 45/116 (38.79%), Postives = 59/116 (50.86%), Query Frame = 0
Query:   73 FFSIFKLGDKCLATPMMTEACVRRQQLCS--PTANLAVNENVAPSSSLV----PVSLVGNEDGE--GANCSICLTCFAQQDRCTRIT-CGHVFHEACVDVWLEAHRTCPLCTVDLD 179
            FFSI+    KC     +T   +RR    S   TA+  +N  + P +       P S V     E  G  C+ICL  F   D    +T C HVFH+ C+D+WLE+HRTCP+C  DLD
Sbjct:  120 FFSIYFC--KCFLENAVTAWNIRRSLSGSLVRTASSPINPGLDPKAIQAFPSFPYSSVKEYRREKYGLECAICLCEFTDDDMLRLLTTCYHVFHQECIDLWLESHRTCPVCRGDLD 233          
BLAST of mRNA_P-wetherbeei_contig1353.2.1 vs. uniprot
Match: A0A0D3D9J9_BRAOL (RING-type domain-containing protein n=9 Tax=Brassiceae TaxID=981071 RepID=A0A0D3D9J9_BRAOL)

HSP 1 Score: 63.9 bits (154), Expect = 1.610e-8
Identity = 32/89 (35.96%), Postives = 52/89 (58.43%), Query Frame = 0
Query:   95 RRQQLCSPTANLAVNENVAPSSSLVPVSLVGN--EDGEGANCSICLTCFAQQDRCTRI--TCGHVFHEACVDVWLEAHRTCPLCTVDLD 179
            +++    P  N  +  ++  S  L P S V +  ED +G  C+ICL  F ++    R+  TC HVFH+ C+D WL++++TCP+C  +LD
Sbjct:   75 QQENASQPPVNPGLEPHIIQSFPLFPFSSVKDLREDNQGLECAICLLEFEEEHVLLRLLTTCYHVFHQECIDRWLDSNKTCPVCRRNLD 163          
BLAST of mRNA_P-wetherbeei_contig1353.2.1 vs. uniprot
Match: ATL30_ARATH (RING-H2 finger protein ATL30 n=6 Tax=Arabidopsis TaxID=3701 RepID=ATL30_ARATH)

HSP 1 Score: 63.9 bits (154), Expect = 1.640e-8
Identity = 34/88 (38.64%), Postives = 51/88 (57.95%), Query Frame = 0
Query:   96 RQQLCSPTANLAVNENVAPSSSLVPVSLVGN--EDGEGANCSICLTCFAQQDRCTRI--TCGHVFHEACVDVWLEAHRTCPLCTVDLD 179
            +Q+   P  N  +  ++  S  L P S V +  ED  G  C+ICL  F ++    R+  TC HVFH+ C+D WLE+++TCP+C  +LD
Sbjct:   74 QQEPVQPPVNPGLEPHIIQSYPLFPFSSVKDLREDKYGLECAICLLEFEEEHILLRLLTTCYHVFHQECIDQWLESNKTCPVCRRNLD 161          
BLAST of mRNA_P-wetherbeei_contig1353.2.1 vs. uniprot
Match: A0A4U5NQU4_POPAL (RING-type domain-containing protein n=3 Tax=Populus TaxID=3689 RepID=A0A4U5NQU4_POPAL)

HSP 1 Score: 63.2 bits (152), Expect = 3.040e-8
Identity = 26/50 (52.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:  131 GANCSICLTCFAQQDRCTRIT-CGHVFHEACVDVWLEAHRTCPLCTVDLD 179
            G  C+ICL  F+ +D    +T C HVFH+ C+D+WLE+H+TCP+C  DLD
Sbjct:   98 GLECAICLAEFSDEDLVRLLTVCYHVFHQECIDLWLESHKTCPVCRRDLD 147          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1353.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9H7_ECTSI7.380e-1156.00RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JXK0_9PHAE1.890e-1056.00RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A4S8J7D7_MUSBA7.080e-949.15RING-type E3 ubiquitin transferase n=2 Tax=Musa Ta... [more]
A0A0E0DB49_9ORYZ1.040e-852.54RING-type domain-containing protein n=1 Tax=Oryza ... [more]
A0A0D3E6X5_BRAOL1.130e-840.00RING-type domain-containing protein n=8 Tax=Brassi... [more]
A0A6G1CS14_9ORYZ1.150e-835.19RING-type domain-containing protein n=1 Tax=Oryza ... [more]
UPI000B8CA77C1.250e-838.79RING-H2 finger protein ATL29-like n=1 Tax=Carica p... [more]
A0A0D3D9J9_BRAOL1.610e-835.96RING-type domain-containing protein n=9 Tax=Brassi... [more]
ATL30_ARATH1.640e-838.64RING-H2 finger protein ATL30 n=6 Tax=Arabidopsis T... [more]
A0A4U5NQU4_POPAL3.040e-852.00RING-type domain-containing protein n=3 Tax=Populu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 134..174
e-value: 2.8E-5
score: 33.6
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 133..174
e-value: 2.3E-10
score: 40.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 134..175
score: 11.972923
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 119..182
e-value: 7.9E-17
score: 62.2
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 8..174
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 121..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1353contigP-wetherbeei_contig1353:2579..3363 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1353.2.1mRNA_P-wetherbeei_contig1353.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1353 2540..3669 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1353.2.1 ID=prot_P-wetherbeei_contig1353.2.1|Name=mRNA_P-wetherbeei_contig1353.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=224bp
MVAIHDVLILIIMAIIIMSAFVLRRACKKWCPHLLVGEGDYERAIAMSAR
EAQHQRQQQQEQKAGIKPEAREFFSIFKLGDKCLATPMMTEACVRRQQLC
SPTANLAVNENVAPSSSLVPVSLVGNEDGEGANCSICLTCFAQQDRCTRI
TCGHVFHEACVDVWLEAHRTCPLCTVDLDDLAIAKRLDAAERAGESPPAE
VTAATVVRRPIPVLAGHIFPSPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD