prot_P-wetherbeei_contig1353.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1353.1.1
Unique Nameprot_P-wetherbeei_contig1353.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length235
Homology
BLAST of mRNA_P-wetherbeei_contig1353.1.1 vs. uniprot
Match: D2VEK0_NAEGR (RING-type domain-containing protein (Fragment) n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VEK0_NAEGR)

HSP 1 Score: 63.9 bits (154), Expect = 3.370e-10
Identity = 24/48 (50.00%), Postives = 33/48 (68.75%), Query Frame = 0
Query:  122 ACAICLLNFAKGDQLVRVTCAHVFHCECVDTWLARHVTCPLCGLSLET 169
            +CA+C+ +F + D+L+R+ C HVFH +CV TWL  H TCP C   L T
Sbjct:    8 SCAVCICDFEECDELIRLPCGHVFHKDCVSTWLNEHNTCPTCRYELPT 55          
BLAST of mRNA_P-wetherbeei_contig1353.1.1 vs. uniprot
Match: A0A2T7EJE3_9POAL (RING-type domain-containing protein n=2 Tax=Panicum hallii TaxID=206008 RepID=A0A2T7EJE3_9POAL)

HSP 1 Score: 63.9 bits (154), Expect = 3.350e-9
Identity = 36/87 (41.38%), Postives = 46/87 (52.87%), Query Frame = 0
Query:   96 DKFESVTVGSSPPGEDDAXXXXXXXAACAICLLNFAKGDQLVRVT-CAHVFHCECVDTWLARHVTCPLCGLSLETLAAGETCGGAAA 181
            +K E    G+  PG  DA       A CA+CL ++A GD+L R+  C H FH  C+D WL R  TCP+C  S     AG+  G  AA
Sbjct:   72 EKDEEEAAGAGAPGGSDA-------ARCAVCLADYADGDELRRMPDCRHAFHRGCIDQWLRRRPTCPVCRASPPP--AGKAAGSTAA 149          
BLAST of mRNA_P-wetherbeei_contig1353.1.1 vs. uniprot
Match: A0A0K9S0F8_SPIOL (RING-type domain-containing protein n=2 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9S0F8_SPIOL)

HSP 1 Score: 65.1 bits (157), Expect = 6.660e-9
Identity = 29/66 (43.94%), Postives = 40/66 (60.61%), Query Frame = 0
Query:   99 ESVTVGSSPPGEDDAXXXXXXXAACAICLLNFAKGDQLVRVT-CAHVFHCECVDTWLARHVTCPLC 163
            ES+ V +  PG ++A         CAICL  F + + +  +  C HVFH EC+DTWL+ H+TCPLC
Sbjct:  124 ESLPVYAYFPGAEEAKQRMIDEVECAICLSEFEEKEWIKEIPYCGHVFHVECIDTWLSNHMTCPLC 189          
BLAST of mRNA_P-wetherbeei_contig1353.1.1 vs. uniprot
Match: A0A250WQV9_9CHLO (RING-type domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WQV9_9CHLO)

HSP 1 Score: 64.3 bits (155), Expect = 1.360e-8
Identity = 27/52 (51.92%), Postives = 34/52 (65.38%), Query Frame = 0
Query:  123 CAICLLNFAKGDQLVRVTCAHVFHCECVDTWLARHVTCPLCGLSLETLAAGE 174
            CA+CL+ +A G+ L  + C H FHCECVDTWL R  TCPLC   +   A G+
Sbjct:  222 CALCLVGYAPGNLLRGLPCGHSFHCECVDTWLLRKGTCPLCRFQINN-AVGD 272          
BLAST of mRNA_P-wetherbeei_contig1353.1.1 vs. uniprot
Match: A0A6A1VE15_9ROSI (RING-H2 finger protein ATL7 n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1VE15_9ROSI)

HSP 1 Score: 63.5 bits (153), Expect = 1.770e-8
Identity = 25/54 (46.30%), Postives = 35/54 (64.81%), Query Frame = 0
Query:  123 CAICLLNFAKGDQLVRV-TCAHVFHCECVDTWLARHVTCPLCGLSLETLAAGET 175
            C++CL ++   D+L  + TC H FH +C+D WL  H TCPLC LSL ++A   T
Sbjct:  100 CSVCLADYQAEDRLQHIPTCGHAFHMDCIDNWLTTHTTCPLCRLSLLSVAKAST 153          
BLAST of mRNA_P-wetherbeei_contig1353.1.1 vs. uniprot
Match: A0A7J7PQ72_9CHLO (RING-type domain-containing protein (Fragment) n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PQ72_9CHLO)

HSP 1 Score: 60.5 bits (145), Expect = 1.800e-8
Identity = 22/41 (53.66%), Postives = 28/41 (68.29%), Query Frame = 0
Query:  123 CAICLLNFAKGDQLVRVTCAHVFHCECVDTWLARHVTCPLC 163
            CAIC  +FA  D + ++ C H +HC C+D WL R VTCPLC
Sbjct:   51 CAICFEDFADNDDVKQLPCGHFYHCGCIDEWLLRDVTCPLC 91          
BLAST of mRNA_P-wetherbeei_contig1353.1.1 vs. uniprot
Match: A0A8K0MWU0_COCNU (E3 ubiquitin-protein ligase n=1 Tax=Cocos nucifera TaxID=13894 RepID=A0A8K0MWU0_COCNU)

HSP 1 Score: 64.3 bits (155), Expect = 1.910e-8
Identity = 31/60 (51.67%), Postives = 39/60 (65.00%), Query Frame = 0
Query:  123 CAICLLNFAKGDQLVRVT-CAHVFHCECVDTWLARHVTCPLCGLSLET--LAAGETCGGA 179
            CA+CL  F+  D L R+  C HVFH +C+D WLA HVTCP+C  +L    +AA  T GGA
Sbjct:  135 CAVCLAEFSDDDTLRRLPKCCHVFHHDCIDAWLASHVTCPVCRSNLADPEVAAATTYGGA 194          
BLAST of mRNA_P-wetherbeei_contig1353.1.1 vs. uniprot
Match: T1MLJ7_TRIUA (RING-type domain-containing protein n=1 Tax=Triticum urartu TaxID=4572 RepID=T1MLJ7_TRIUA)

HSP 1 Score: 60.8 bits (146), Expect = 2.070e-8
Identity = 28/60 (46.67%), Postives = 35/60 (58.33%), Query Frame = 0
Query:  123 CAICLLNFAKGDQL-VRVTCAHVFHCECVDTWLARHVTCPLCGLSLETLAAGETCGGAAA 181
            CA+CL  F   D L +   C+H FH +C+D WLA HVTCP+C  +L   A      GAAA
Sbjct:   54 CAVCLSEFDDDDTLRLLPKCSHAFHADCIDAWLASHVTCPVCRANLVPGADAPVASGAAA 113          
BLAST of mRNA_P-wetherbeei_contig1353.1.1 vs. uniprot
Match: A0A7C9AWP6_OPUST (RING-type E3 ubiquitin transferase (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9AWP6_OPUST)

HSP 1 Score: 60.1 bits (144), Expect = 2.620e-8
Identity = 24/42 (57.14%), Postives = 30/42 (71.43%), Query Frame = 0
Query:  123 CAICLLNFAKGDQLVRVT-CAHVFHCECVDTWLARHVTCPLC 163
            CAICL  F + + +  +  C HVFH EC+DTWL+ HVTCPLC
Sbjct:    8 CAICLSEFEEREWIKEIPYCGHVFHVECIDTWLSSHVTCPLC 49          
BLAST of mRNA_P-wetherbeei_contig1353.1.1 vs. uniprot
Match: A0A4P1R0Y3_LUPAN (RING-type domain-containing protein n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=A0A4P1R0Y3_LUPAN)

HSP 1 Score: 62.0 bits (149), Expect = 3.070e-8
Identity = 23/42 (54.76%), Postives = 33/42 (78.57%), Query Frame = 0
Query:  123 CAICLLNFAKGDQLVRVT-CAHVFHCECVDTWLARHVTCPLC 163
            CAICL  F +G+++  +  C HVFH +C+DTW+A+HVTCP+C
Sbjct:  127 CAICLEEFREGEKVKMIVYCKHVFHPQCIDTWIAKHVTCPIC 168          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1353.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D2VEK0_NAEGR3.370e-1050.00RING-type domain-containing protein (Fragment) n=1... [more]
A0A2T7EJE3_9POAL3.350e-941.38RING-type domain-containing protein n=2 Tax=Panicu... [more]
A0A0K9S0F8_SPIOL6.660e-943.94RING-type domain-containing protein n=2 Tax=Spinac... [more]
A0A250WQV9_9CHLO1.360e-851.92RING-type domain-containing protein n=1 Tax=Chlamy... [more]
A0A6A1VE15_9ROSI1.770e-846.30RING-H2 finger protein ATL7 n=1 Tax=Morella rubra ... [more]
A0A7J7PQ72_9CHLO1.800e-853.66RING-type domain-containing protein (Fragment) n=1... [more]
A0A8K0MWU0_COCNU1.910e-851.67E3 ubiquitin-protein ligase n=1 Tax=Cocos nucifera... [more]
T1MLJ7_TRIUA2.070e-846.67RING-type domain-containing protein n=1 Tax=Tritic... [more]
A0A7C9AWP6_OPUST2.620e-857.14RING-type E3 ubiquitin transferase (Fragment) n=1 ... [more]
A0A4P1R0Y3_LUPAN3.070e-854.76RING-type domain-containing protein n=1 Tax=Lupinu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 123..163
e-value: 2.0E-4
score: 30.7
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 122..163
e-value: 8.4E-12
score: 45.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 123..163
score: 11.633604
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 73..169
e-value: 1.6E-17
score: 65.0
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 5..163
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 122..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1353contigP-wetherbeei_contig1353:1099..2220 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1353.1.1mRNA_P-wetherbeei_contig1353.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1353 682..2472 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1353.1.1 ID=prot_P-wetherbeei_contig1353.1.1|Name=mRNA_P-wetherbeei_contig1353.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=235bp
MILLLFLIVVVLLAGFVSRSCCAKFCPQLLLGEPLPRRDGGGNSGGGSGS
GGAREMVAVGVSSDARKSFVVFELQKKSLKRSVMTEASVKFSSLEDKFES
VTVGSSPPGEDDANEDDDGGAACAICLLNFAKGDQLVRVTCAHVFHCECV
DTWLARHVTCPLCGLSLETLAAGETCGGAAAAGAAAAGATGVPAGAAAAH
AASIAVAAAPVASIAPSESTGRSLFRGNRWLLAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD