prot_P-wetherbeei_contig13520.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13520.1.1
Unique Nameprot_P-wetherbeei_contig13520.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length285
Homology
BLAST of mRNA_P-wetherbeei_contig13520.1.1 vs. uniprot
Match: D7FNP3_ECTSI (Poly(A) binding protein, cytoplasmic 4-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNP3_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 1.040e-71
Identity = 156/326 (47.85%), Postives = 194/326 (59.51%), Query Frame = 0
Query:    1 LHDEPIAPDESNLFVGDLARGLVEEELERAFAVHGTVAAVSIKRDRATGKNLGYGFVKMSTHDEAVSAKLAMHETELHGRKVRVGWAQKNTSLFVGGLDD-IVTTEALRLMFAEYGPIDEEHTYVKNG-KYGFAKLKYRLHAEAARKDLNSKPVVNG--HPLKVEWNNVGGTTQHHGRGGAXXXXXXXSGLGSNSPYGTRILP--------------------AHG--------AHSVHVQFEGEQ--VRAQSVVPGRS------PGAAAVAAASATGGSAPSVRR--RFYAFVHFPDTPEGSRGAAAAVEALNGTTFDELRVTCS 284
            L D+P  P+E NLFVGDLAR L EE+LE+AF  HG V +VSIKRDRATGKNLGYGFVK+S+H EA +AK AM   EL GR+VRVGWAQKNTSL+VGGL+   +TTE L   FA +GP+D+E T +K G K+GF K +YRLHAEAA+K+LN +P  +G    L++EWN+V  + Q     G+     XX                                   AH         +H+VHVQFEG+Q  V A + V  R       P    V  AS   G +P  R+  R +AFVHFP TP+G R AA A++ LNGTT  ELRV C+
Sbjct:  195 LKDDPGTPEECNLFVGDLARNLTEEKLEKAFEQHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNERPAFDGLCPSLEIEWNSVESSAQASETAGSEKSTAXXXXXXXXXXXXXXXXKEXXXXXXXXXXXXXXXXXXXAHSRHPRGEVSSHTVHVQFEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAADAIKGLNGTTISELRVHCT 520          
BLAST of mRNA_P-wetherbeei_contig13520.1.1 vs. uniprot
Match: A0A6H5L4J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4J2_9PHAE)

HSP 1 Score: 241 bits (614), Expect = 1.700e-70
Identity = 154/326 (47.24%), Postives = 192/326 (58.90%), Query Frame = 0
Query:    1 LHDEPIAPDESNLFVGDLARGLVEEELERAFAVHGTVAAVSIKRDRATGKNLGYGFVKMSTHDEAVSAKLAMHETELHGRKVRVGWAQKNTSLFVGGLDD-IVTTEALRLMFAEYGPIDEEHTYVKNG-KYGFAKLKYRLHAEAARKDLNSKPVVNG--HPLKVEWNNVGGTTQHHGRGGAXXXXXXXS--------------------GLGSNSPYGTRILPAHG--------AHSVHVQFEGEQ--VRAQSVVPGRS------PGAAAVAAASATGGSAPSVRR--RFYAFVHFPDTPEGSRGAAAAVEALNGTTFDELRVTCS 284
            L D+P  P+E NLFVGDLAR L EE+LE+AF  HG V +VSIKRDRATGKNLGYGFVK+S+H EA +AK AM   EL GR+VRVGWAQKNTSL+VGGL+   +TTE L   FA +GP+D+E T +K G K+GF K +YRLHAEAA+K+LN +P  +G    L++EWN+V  + Q     G+                                          AH         +H+VHVQFEG+Q  V A + V  R       P    V  AS   G +P  R+  R +AFVHFP TP+G R AA A++ LNGTT  ELRV C+
Sbjct:   58 LKDDPGTPEECNLFVGDLARNLTEEKLEKAFEQHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNERPAFDGLCPSLEIEWNSVESSAQASETAGSEKSTAEDRTXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXAHSRHPRGEVSSHTVHVQFEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAANAIKDLNGTTISELRVHCT 383          
BLAST of mRNA_P-wetherbeei_contig13520.1.1 vs. uniprot
Match: L8H825_ACACA (RNA recognition motif domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H825_ACACA)

HSP 1 Score: 164 bits (415), Expect = 3.150e-44
Identity = 97/279 (34.77%), Postives = 150/279 (53.76%), Query Frame = 0
Query:    9 DESNLFVGDLARGLVEEELERAFAVHGTVAAVSIKRDRATGKNLGYGFVKMSTHDEAVSAKLAMHETELHGRKVRVGWAQKNTSLFVGGLDDIVTTEALRLMFAEYGPIDEEHTYVKNGKYGFAKLKYRLHAEAARKDLNSKPVVNGHPLKVEWNNVGGTTQHHGRGGAXXXXXXXSGLGSNSPYGTRILPAHGAHSVHVQFEGEQVRA--QSVVPGRSPGAAAVAAASATGGSAPSVRRRFYAFVHFPDTPEGSRGAAAAVEALNGTTFDELRVTCSF 285
            DE  LF+GDLARGL E++L  AF   G ++ V IKRDR T  +LGYGFV + + ++A +AK AMH   + GR +R+GWAQKNT+LF+G LD  +T+  LR +F ++GPI EE T+VKN  YGF + ++R HAE A++++N+K V+    +++ W +                                    +  H VH+QFE  +  A  +S V  +      V + +         + R + F+++ DT  G   AA A+  LN +    +R+ C++
Sbjct:   61 DERCLFIGDLARGLNEDQLREAFDPFGVIS-VEIKRDRVTNYSLGYGFVLLKSREDAGAAKKAMHRQVVGGRAIRIGWAQKNTNLFIGDLDPSITSAQLREVFRQFGPIYEEETFVKNRNYGFVRFRHRKHAEMAKREMNNK-VLGARAIRIGWGDAN----------------------------------YQRHCVHIQFEPAESEALTESEVIAKFEEFGTVMSVNLPRNQG---QLRGFGFIYYDDTDAGENSAARAITTLNNSPICGVRIQCNY 300          
BLAST of mRNA_P-wetherbeei_contig13520.1.1 vs. uniprot
Match: A0A7S0TF52_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Elphidium margaritaceum TaxID=933848 RepID=A0A7S0TF52_9EUKA)

HSP 1 Score: 146 bits (368), Expect = 2.120e-38
Identity = 107/293 (36.52%), Postives = 147/293 (50.17%), Query Frame = 0
Query:    8 PDESNLFVGDLARGLVEEELERAFAVHGTVAAVSIKRDRATGKNLGYGFVKMSTHDEAVSAKLAMHETELHGRKVRVGWAQKNTSLFV---GGLDDIVTTEALRLMFAEYGPIDEEHTYVKNGKYGFAKLKYRLHAEAARKDLNSKPVV--NGH----PLKVEWNNVGGTTQHHGRGGAXXXXXXXSGLGSNSPYGTRILPAHGAHSVHVQFEGEQVRAQSV------VPGRSPGAAAVAAASATGGSAPSVRRRFYAFVHFPDTPEGSRGAAAAVEALNGTTFDELRVTCSF 285
            PDES+LF+GDL+R + E+ L + F   G V  V IKRD+ T  NLGYGFVK      A  AK  ++  E+ GR +R+GWAQKNT+LFV   G ++  +T E LR +F+E+GPI EE T+VK  KYGF K K+RLHAE A+  L+ K ++  NG+    P+++ W +    TQ +                                 VHVQFE  Q  A SV         +      V   S    S    R + Y F+HF +  EG   AA A+  L  +    + + C+F
Sbjct:    2 PDESSLFIGDLSRSVNEDMLRKLFEQLGEVE-VDIKRDKVTKNNLGYGFVKFRNRCHAEQAKRKLNGLEIAGRAIRIGWAQKNTNLFVCLVGDVERHITGEHLREIFSEFGPIYEEDTFVKRNKYGFVKFKHRLHAEKAKAALDGKHLLTKNGYKTMKPVRIGWGDA--NTQRN--------------------------------CVHVQFE--QNSASSVDLKEEDFKQQFQRFGVVNKVSLPRYS--DKRLKGYGFIHFEENDEGEESAARAITELTASPIKGVVIMCNF 255          
BLAST of mRNA_P-wetherbeei_contig13520.1.1 vs. uniprot
Match: W7TSQ6_9STRA (Tia1 cytotoxic granule-associated rna binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSQ6_9STRA)

HSP 1 Score: 151 bits (382), Expect = 4.830e-38
Identity = 102/295 (34.58%), Postives = 154/295 (52.20%), Query Frame = 0
Query:    9 DESNLFVGDLARGLVEEELERAFAVHGTVAAVSIKRDRATGKNLGYGFVKMSTHDEAVSAKLAMHETELHGRKVRVGWAQKNTSLFVGGLDDIVTTEALRLMFAEYGPIDEEHTYVKNGK---YGFAKLKYRLHAEAARKDLNSKPVVNG-HPLKVEWNNVGGTTQHHGRGGAXXXXXXXSG--LGSNSPYGTRILPAHGAHSVHVQFEG---EQVRAQSVVPGR-SPGAAAVAAASATG--------GSAPSVRRRFYAFVHFPDTPEGSRGAAAAVEALNGTTFDELRVTCSF 285
            D+  LF+GDLARGL E E+ +AFA  G V  V IKRD+ T +NLGYGFV+MS+H++A  AK  M   ++ GR++R+GWAQ+NT+LF+G LD+    E L   F  +G +    +Y++ GK   YG  K   R  AE AR++++ + + +G  P++V W++    T+  G           S   +    P    +L +   +SVHV FE    E +  ++++ G  +P    +A     G            S  RR Y FVHF  +  G   A  A+  L G     +R+ C+F
Sbjct:  103 DDCILFIGDLARGLTEREVAQAFAAVGNVEMVDIKRDKVTMRNLGYGFVQMSSHEQAAVAKERMQGADIQGRRIRIGWAQRNTTLFIGDLDESTNVEDLHRTFGPFGLLYTNDSYLRQGKCGKYGSVKFMSRKDAETARREMHGRVLRDGTRPIRVVWHHPQTITKKTGLSVPLPSNEQHSRELVHIPPPPPAGVLVSSRPYSVHVHFEADGMENLVTENLIYGLFAPFGQIIAVILPQGPGILCSDQNEDVSCCRRGYGFVHFTGSALGRLCAIEAIRTLQGEIVAGIRLQCAF 397          
BLAST of mRNA_P-wetherbeei_contig13520.1.1 vs. uniprot
Match: A0A7S0DL40_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DL40_9EUKA)

HSP 1 Score: 148 bits (373), Expect = 8.080e-38
Identity = 97/283 (34.28%), Postives = 145/283 (51.24%), Query Frame = 0
Query:   13 LFVGDLARGLVEEELERAFAVHGTVAAVSIKRDRATGKNLGYGFVKMSTHDEAVSAKLAMHETELHGRKVRVGWAQKNTSLFVGGLDDIVTTEALRLMFAEYGPIDEEHTYVKNGK-YGFAKLKYRLHAEAARKDLNSKPVVNG-HPLKVEWNNVGGTTQHHGRGGAXXXXXXXSGLGSNSPYGTRILPAHGAHSVHVQFE-GEQVRA-------QSVVPGRSPGAAAVAAASATGGSAPSVRRRFYAFVHFPDTPEGSRGAAAAVEALNGTTFDELRVTCSF 285
            +FVGDL+R + +++L     +HG+V  V IKRDR T  NLGYGFV+  TH++A+ AK A+H  E+ GRK+R GWAQ+NT+LFVG LD+ +     R  F+ YG + ++ TY K  K +G  K K R +AE A+ +LN K +     P++V W   G T+                                  H VHV+F+ G++V++       + V+         V   +    S  +++   Y FVHF DT +G   A  A+  L+GT    L V C++
Sbjct:   77 IFVGDLSRTVKDKDLRAVMELHGSVVNVDIKRDRVTNNNLGYGFVQFETHEQALKAKKALHGVEVSGRKIRTGWAQRNTTLFVGDLDNTIDATVYRTAFSRYGNLVDDETYFKVDKGFGMVKFKTRENAETAKVELNGKRIGQSKRPVRVIW---GDTSVQK-------------------------------HCVHVKFDVGKEVKSIQESEISEDVLQKVFQEYGQVLTVNLPRHSDNTLKG--YGFVHFEDTEKGEESAKKAIANLSGTKIGRLVVQCNY 323          
BLAST of mRNA_P-wetherbeei_contig13520.1.1 vs. uniprot
Match: A0A7S3Z8S4_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z8S4_9EUKA)

HSP 1 Score: 144 bits (363), Expect = 3.960e-36
Identity = 98/284 (34.51%), Postives = 138/284 (48.59%), Query Frame = 0
Query:   13 LFVGDLARGLVEEELERAFAVHGTVAAVSIKRDRATGKNLGYGFVKMSTHDEAVSAKLAMHETELHGRKVRVGWAQKNTSLFVGGLDDIVTTEALRLMFAEYGPIDEEHTYVKNGK-YGFAKLKYRLHAEAARKDLNSKPVVNG-HPLKVEWNNVGGTTQHHGRGGAXXXXXXXSGLGSNSPYGTRILPAHGAHSVHVQFE-GEQVRAQSVVPGRSPGAAAVAAASATGGSAPSVRR--------RFYAFVHFPDTPEGSRGAAAAVEALNGTTFDELRVTCSF 285
            +FVGDL+R + +++L      HGTV  V IKRD+ T  NLGYGFV+  TH+EAV AK A+H   + GRK+R GWAQ+NT+LFVG LD  V     R  FA YG +  + TY K  K +G  K K R +AE A+ +LN K +     P++V W   G T+                                  H VHV+F+ G++V+    +         +    +  G   SV          + Y FVHF D+ +G   A  A+  L+GT    L + C++
Sbjct:  110 IFVGDLSRTVRDKDLRTVMEQHGTVVNVDIKRDKVTHNNLGYGFVQFETHEEAVKAKKALHGVVVSGRKIRTGWAQRNTTLFVGDLDSFVDESEYRAAFARYGSLVLDETYFKVDKGFGMVKYKTRENAETAKMELNGKKIGKSKRPVRVIW---GDTSVQK-------------------------------HCVHVKFDVGKEVK---TIQDSDISEDDLQKVFSEYGQVQSVNLPRHNDQSLKGYGFVHFEDSEKGEESAKKAIANLSGTKIGRLVIQCNY 356          
BLAST of mRNA_P-wetherbeei_contig13520.1.1 vs. uniprot
Match: A0A7S2RB19_9STRA (Hypothetical protein n=4 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RB19_9STRA)

HSP 1 Score: 135 bits (341), Expect = 2.630e-32
Identity = 75/174 (43.10%), Postives = 106/174 (60.92%), Query Frame = 0
Query:    4 EPIAPDESNLFVGDLARGLVEEELERAFAVHGTVAAVSIKRDRATGKNLGYGFVKMSTHDEAVSAKLAMHETELHGRKVRVGWAQKNTSLFVGGLDDIVTTEALRLMFAEYGPIDEEHTYVKNGK--------------YGFAKLKYRLHAEAARKDLNSKPVVNGH-PLKVEW 162
            +P   D++NLFVGDLAR + EEEL+ AF  HG V  V +KRDR T +NLGYGFV+M +H EA  AK +MH  E+ GR+VRVGWA KN++L V  LD  ++ E L   FA +GP+D + + V+  +                  K   R HAE+A+++L+   + +   PL+V+W
Sbjct:   46 QPTPGDDNNLFVGDLARDITEEELKDAFEPHGRVVEVLVKRDRLTHRNLGYGFVRMGSHAEACLAKESMHGREVAGRRVRVGWAMKNSTLVVKDLDPGLSEEDLLNAFARFGPLDLDQSGVRPAEPCSEEEEAGGSTALQAVFKFTQRTHAESAKQNLSGMMLASSSAPLRVDW 219          
BLAST of mRNA_P-wetherbeei_contig13520.1.1 vs. uniprot
Match: A0A836CDW8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDW8_9STRA)

HSP 1 Score: 134 bits (336), Expect = 6.770e-32
Identity = 66/128 (51.56%), Postives = 87/128 (67.97%), Query Frame = 0
Query:   37 VAAVSIKRDRATGKNLGYGFVKMSTHDEAVSAKLAMHETELHGRKVRVGWAQKNTSLFVGGLDDIVTTEALRLMFAEYGPIDEEHTYVKNGKYGFAKLKYR--LHAEAARKDLNSKPVVNGHPLKVEW 162
            V  V+IKRDR+T KNLGYGFV+M +H EA  AK  MH  E+HGR++RVGWAQKN +L V GL D VT E ++ +F  +G ++EE+T +     G A +KYR  LHAE AR+ LN    +   PL+V+W
Sbjct:   41 VLTVNIKRDRSTSKNLGYGFVRMGSHAEACVAKERMHRAEVHGRRIRVGWAQKNAALAVSGLPDGVTAEQVKALFRPFGALEEENTQLMTDGSGTAVVKYRNRLHAEDARRQLNGSQALGPAPLRVDW 168          
BLAST of mRNA_P-wetherbeei_contig13520.1.1 vs. uniprot
Match: A0A7R9U4X6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4X6_9STRA)

HSP 1 Score: 132 bits (331), Expect = 5.110e-31
Identity = 66/164 (40.24%), Postives = 102/164 (62.20%), Query Frame = 0
Query:    9 DESNLFVGDLARGLVEEELERAFAVHGTVAAVSIKRDRATGKNLGYGFVKMSTHDEAVSAKLAMHETELHGRKVRVGWAQKNTSLFVGGLDDIVTTEALRLMFAEYGPIDEEHTYVKNGKYGFA----------KLKYRLHAEAARKDLNSKPVVNGHPLKVEW 162
            D  +LFVGDL R   EE+L++AF+ +G +    +KRD+ +G+NLGYGF+K+ T D A  A   M+   + GR++R+ +AQKN  L V  L + VT + L  +F E+GP+D+EH  ++  + GFA          K  YR HAE+AR  +N++  ++G  L+V+W
Sbjct:   47 DRCHLFVGDLHRSTTEEDLQKAFSPYGKIVFAEVKRDKVSGRNLGYGFLKLDTEDGAQRALREMNGVPIKGRRIRINYAQKNCELHVTNLTEDVTKDELEAIFEEHGPLDKEHCVMRPAEPGFAGGKVGPSAIIKFLYRQHAESARDAVNNRVNLHGALLRVDW 210          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13520.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNP3_ECTSI1.040e-7147.85Poly(A) binding protein, cytoplasmic 4-like n=1 Ta... [more]
A0A6H5L4J2_9PHAE1.700e-7047.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
L8H825_ACACA3.150e-4434.77RNA recognition motif domain containing protein n=... [more]
A0A7S0TF52_9EUKA2.120e-3836.52Hypothetical protein (Fragment) n=1 Tax=Elphidium ... [more]
W7TSQ6_9STRA4.830e-3834.58Tia1 cytotoxic granule-associated rna binding prot... [more]
A0A7S0DL40_9EUKA8.080e-3834.28Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A7S3Z8S4_9EUKA3.960e-3634.51Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A7S2RB19_9STRA2.630e-3243.10Hypothetical protein n=4 Tax=Rhizochromulina marin... [more]
A0A836CDW8_9STRA6.770e-3251.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9U4X6_9STRA5.110e-3140.24Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 12..85
e-value: 6.0E-21
score: 85.6
coord: 92..161
e-value: 2.3E-8
score: 43.8
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 93..157
e-value: 2.1E-6
score: 27.5
coord: 13..83
e-value: 3.9E-14
score: 52.2
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 91..165
score: 11.792842
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 11..89
score: 16.431911
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 2..90
e-value: 7.4E-23
score: 83.2
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 91..196
e-value: 1.4E-12
score: 49.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..186
NoneNo IPR availablePANTHERPTHR10352EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Gcoord: 9..88
coord: 90..164
NoneNo IPR availableCDDcd00590RRM_SFcoord: 242..284
e-value: 0.00212094
score: 34.2029
NoneNo IPR availableCDDcd00590RRM_SFcoord: 13..84
e-value: 3.76331E-17
score: 72.3377
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 89..190
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 9..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13520contigP-wetherbeei_contig13520:330..1830 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13520.1.1mRNA_P-wetherbeei_contig13520.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13520 330..1830 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13520.1.1 ID=prot_P-wetherbeei_contig13520.1.1|Name=mRNA_P-wetherbeei_contig13520.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=285bp
LHDEPIAPDESNLFVGDLARGLVEEELERAFAVHGTVAAVSIKRDRATGK
NLGYGFVKMSTHDEAVSAKLAMHETELHGRKVRVGWAQKNTSLFVGGLDD
IVTTEALRLMFAEYGPIDEEHTYVKNGKYGFAKLKYRLHAEAARKDLNSK
PVVNGHPLKVEWNNVGGTTQHHGRGGAGAAAGGGSGLGSNSPYGTRILPA
HGAHSVHVQFEGEQVRAQSVVPGRSPGAAAVAAASATGGSAPSVRRRFYA
FVHFPDTPEGSRGAAAAVEALNGTTFDELRVTCSF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf