mRNA_P-wetherbeei_contig13514.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13514.1.1 vs. uniprot
Match: A0A6H5LAA3_9PHAE (PHS protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAA3_9PHAE) HSP 1 Score: 173 bits (439), Expect = 3.410e-48 Identity = 93/154 (60.39%), Postives = 118/154 (76.62%), Query Frame = 1
Query: 4 SNIGLFLAEMSSDSLQVMGMAERGMLPARFAVRGKYGMPLLGTIASSMGVFFLGFLSFTAIVEILNFLYCWAQLLELSAFIKLRMSRPDIHRPFAIPLGTVGVTLMLLPAFAFLIVLIVLSSLLTWIICLTLMAAGVGLWWLLETAKRKEWCEF 465
+NIGLF AEM+SD+LQ+MGMAERGMLPA FA RG +G+ L +ASS GV FLG L F IVEILN LYC+A++LE AFIKLR+S D+HRP+ IPLGTVGV L+LLPA F+++L SS++TW++ + GVGL+ L AKR++WCEF
Sbjct: 400 ANIGLFEAEMTSDALQLMGMAERGMLPAVFAKRGPHGISTLAIVASSTGVAFLGLLGFETIVEILNLLYCFAEILEFVAFIKLRVSHRDMHRPYEIPLGTVGVCLLLLPAACFVLLLAAFSSVITWVVSGVALLIGVGLYPGLLLAKREKWCEF 553
BLAST of mRNA_P-wetherbeei_contig13514.1.1 vs. uniprot
Match: UPI001FB15A03 (probable polyamine transporter At3g19553 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB15A03) HSP 1 Score: 150 bits (379), Expect = 4.690e-40 Identity = 76/171 (44.44%), Postives = 123/171 (71.93%), Query Frame = 1
Query: 1 VSNIGLFLAEMSSDSLQVMGMAERGMLPARFAVRGKYGMPLLGTIASSMGVFFLGFLSFTAIVEILNFLYCWAQLLELSAFIKLRMSRPDIHRPFAIPLGTVGVTLMLLPAFAFLIVLIVLSSLLTWIICLTLMAAGVGLWWLLETAKRKEWCEFVPQQESMHAHAVVKDT 513
+SN+GLF AEMSSD+ Q++GM+E GMLP+ FA R KYG P L I S+ GV FL ++SF I+E LNFLY LLE +AF+KLR+S+P++HRP+ +PL T+G L+ +P L++++ L+S T+++ ++ G+ ++ +L AK K++ +F+P++E + ++A V++T
Sbjct: 294 MSNMGLFEAEMSSDAFQLLGMSEMGMLPSVFASRSKYGTPTLSIICSATGVIFLSWMSFQEIIEFLNFLYSIGMLLEFAAFLKLRISKPELHRPYKVPLKTIGAFLLCVPPSFLLVLVMCLASAKTFVVSGAVVIVGMIMYAILTIAKEKKYVDFIPEKEMITSYACVEET 464
BLAST of mRNA_P-wetherbeei_contig13514.1.1 vs. uniprot
Match: A0A0A9PF43_ARUDO (Uncharacterized protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9PF43_ARUDO) HSP 1 Score: 143 bits (360), Expect = 5.220e-40 Identity = 77/171 (45.03%), Postives = 109/171 (63.74%), Query Frame = 1
Query: 1 VSNIGLFLAEMSSDSLQVMGMAERGMLPARFAVRGKYGMPLLGTIASSMGVFFLGFLSFTAIVEILNFLYCWAQLLELSAFIKLRMSRPDIHRPFAIPLGTVGVTLMLLPAFAFLIVLIVLSSLLTWIICLTLMAAGVGLWWLLETAKRKEWCEF---VPQQESMHAHAVV 504
+SN+GLF AEMSSDS Q++GMAE GM+PA FA R ++G P + S+ GV L F+SF I+E LNFLY L +AF+KLR+ PD+ RP+ IP+GT+G M +P + ++ L+S T+++ + AGV L++++E AKR+EW EF VP ES H
Sbjct: 1 MSNMGLFEAEMSSDSFQLLGMAEMGMIPAIFARRSRHGTPTFSILCSATGVVILSFMSFQEIIEFLNFLYGLGMLAVFAAFVKLRVKDPDLPRPYRIPVGTIGAAAMCVPPVVLITTVMCLASARTFVVSTAVAVAGVALYYVVEHAKRREWVEFLAPVPPAESSHGSTTA 171
BLAST of mRNA_P-wetherbeei_contig13514.1.1 vs. uniprot
Match: A0A6I9SHE1_ELAGV (probable polyamine transporter At3g19553 isoform X1 n=4 Tax=Arecaceae TaxID=4710 RepID=A0A6I9SHE1_ELAGV) HSP 1 Score: 147 bits (371), Expect = 8.720e-39 Identity = 78/166 (46.99%), Postives = 116/166 (69.88%), Query Frame = 1
Query: 1 VSNIGLFLAEMSSDSLQVMGMAERGMLPARFAVRGKYGMPLLGTIASSMGVFFLGFLSFTAIVEILNFLYCWAQLLELSAFIKLRMSRPDIHRPFAIPLGTVGVTLMLLPAFAFLIVLIVLSSLLTWIICLTLMAAGVGLWWLLETAKRKEWCEFVPQQESMHAHA 498
+SN+GLF AEMSSDS Q++GM+E GMLPA FA+R KYG P + + S+ G+ FL ++SF I+E LNFLY LLE +AFIKLR+ +PD+HRP+ +P+GT+G L+ LP LI+++ L+S T+I+ ++M G L+ +E KR+ W +F+ S+H+ +
Sbjct: 295 MSNMGLFQAEMSSDSFQLLGMSEMGMLPAFFAIRSKYGTPTISILFSASGIIFLSWMSFQEILEFLNFLYALGMLLEFAAFIKLRIKKPDLHRPYKVPVGTLGAVLLCLPPAFLLILVMCLASARTFIVSGSVMLFGALLYPAIEYMKRRNWVKFI--STSVHSQS 458
BLAST of mRNA_P-wetherbeei_contig13514.1.1 vs. uniprot
Match: D8S2V5_SELML (Uncharacterized protein LAT3-1 n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S2V5_SELML) HSP 1 Score: 146 bits (368), Expect = 1.950e-38 Identity = 80/160 (50.00%), Postives = 110/160 (68.75%), Query Frame = 1
Query: 1 VSNIGLFLAEMSSDSLQVMGMAERGMLPARFAVRGKYGMPLLGTIASSMGVFFLGFLSFTAIVEILNFLYCWAQLLELSAFIKLRMSRPDIHRPFAIPLGTVGVTLMLLPAFAFLIVLIVLSSLLTWIICLTLMAAGVGLWWLLETAKRKEWCEFVPQQE 480
+SN+GLF AEMSSDS Q++GMAE GMLP FA R K+G P+LG + S+ GV L +++F IVE+LNFLYC LLE +AFI LR+ RPD+HRPF + LGT+GV + LP AFL++++ L+S+ T + + A G+ L+ + K K+W EF E
Sbjct: 290 LSNMGLFEAEMSSDSFQLLGMAEIGMLPRIFARRSKHGTPVLGILCSATGVVLLSWMTFQEIVELLNFLYCVGMLLEFAAFIWLRVKRPDLHRPFKLQLGTLGVVMFCLPPSAFLVLVMCLASMRTIFVSCGVAAVGIVLYPAIMFVKSKKWVEFAVDTE 449
BLAST of mRNA_P-wetherbeei_contig13514.1.1 vs. uniprot
Match: UPI00053CA08C (probable polyamine transporter At3g19553 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053CA08C) HSP 1 Score: 145 bits (367), Expect = 2.250e-38 Identity = 76/160 (47.50%), Postives = 110/160 (68.75%), Query Frame = 1
Query: 1 VSNIGLFLAEMSSDSLQVMGMAERGMLPARFAVRGKYGMPLLGTIASSMGVFFLGFLSFTAIVEILNFLYCWAQLLELSAFIKLRMSRPDIHRPFAIPLGTVGVTLMLLPAFAFLIVLIVLSSLLTWIICLTLMAAGVGLWWLLETAKRKEWCEFVPQQE 480
+SN+GLF AEMSSD+ Q++GM+E GMLPA FA R K+G P + + S+ GV FL +LSF I+E LNFLY LLE +AF++LR+ + D+HRP+ +PLGT GV L+ P LI+++VL+SL T+++ ++ G L+ L K K W F+P++E
Sbjct: 293 LSNLGLFEAEMSSDAFQLLGMSEIGMLPAFFARRSKHGTPTISILCSATGVIFLSWLSFQEIIEFLNFLYALGMLLEFAAFVRLRIKKADLHRPYKVPLGTCGVALLCFPPSLLLILVMVLASLRTFLVSGAVILFGFCLYPFLSLVKEKRWLSFIPEEE 452
BLAST of mRNA_P-wetherbeei_contig13514.1.1 vs. uniprot
Match: PHSD_ARATH (Probable polyamine transporter At3g19553 n=28 Tax=Brassicaceae TaxID=3700 RepID=PHSD_ARATH) HSP 1 Score: 145 bits (367), Expect = 2.290e-38 Identity = 74/159 (46.54%), Postives = 111/159 (69.81%), Query Frame = 1
Query: 1 VSNIGLFLAEMSSDSLQVMGMAERGMLPARFAVRGKYGMPLLGTIASSMGVFFLGFLSFTAIVEILNFLYCWAQLLELSAFIKLRMSRPDIHRPFAIPLGTVGVTLMLLPAFAFLIVLIVLSSLLTWIICLTLMAAGVGLWWLLETAKRKEWCEFVPQQ 477
+SN+GLF AEMSSD+ Q++GM+E GMLPA FA R KYG P + + S+ GV FL ++SF I+E LNFLY LLE +AF+KLR+ +PD+HRP+ +PL T GV+++ LP +I+++VL++ T++I ++ G L+ L K K+W F+P++
Sbjct: 294 MSNLGLFEAEMSSDAFQLLGMSEIGMLPAFFAQRSKYGTPTISILCSATGVIFLSWMSFQEIIEFLNFLYALGMLLEFAAFVKLRIKKPDLHRPYRVPLNTFGVSMLCLPPSLLVILVMVLAAPKTFLISGVIIVLGFCLYPFLTLVKEKQWARFIPEE 452
BLAST of mRNA_P-wetherbeei_contig13514.1.1 vs. uniprot
Match: A0A200R342_9MAGN (Amino acid/polyamine transporter I n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200R342_9MAGN) HSP 1 Score: 145 bits (366), Expect = 4.520e-38 Identity = 76/157 (48.41%), Postives = 111/157 (70.70%), Query Frame = 1
Query: 1 VSNIGLFLAEMSSDSLQVMGMAERGMLPARFAVRGKYGMPLLGTIASSMGVFFLGFLSFTAIVEILNFLYCWAQLLELSAFIKLRMSRPDIHRPFAIPLGTVGVTLMLLPAFAFLIVLIVLSSLLTWIICLTLMAAGVGLWWLLETAKRKEWCEFVP 471
+SN+GLF AEMSSD+ Q++GM+E GMLPA F+ R KYG P + + S+ GV FL ++SF IVE LNFLYC LLE +AFI+LR+ +PD+HRP+ +PL T GVT++ LP +I+++ L+S T+I+ +++ GV L+ + AK + W +F P
Sbjct: 292 MSNLGLFEAEMSSDAFQLLGMSEMGMLPAIFSSRSKYGTPTISILCSATGVVFLSWMSFQEIVEFLNFLYCIGMLLEFAAFIRLRIKKPDLHRPYKVPLQTFGVTILCLPPAILVILVMCLASFRTFIVSGSVIILGVLLYLTVVKAKERNWTKFEP 448
BLAST of mRNA_P-wetherbeei_contig13514.1.1 vs. uniprot
Match: A0A5S9XDT9_ARATH (Uncharacterized protein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=A0A5S9XDT9_ARATH) HSP 1 Score: 145 bits (366), Expect = 5.420e-38 Identity = 74/159 (46.54%), Postives = 111/159 (69.81%), Query Frame = 1
Query: 1 VSNIGLFLAEMSSDSLQVMGMAERGMLPARFAVRGKYGMPLLGTIASSMGVFFLGFLSFTAIVEILNFLYCWAQLLELSAFIKLRMSRPDIHRPFAIPLGTVGVTLMLLPAFAFLIVLIVLSSLLTWIICLTLMAAGVGLWWLLETAKRKEWCEFVPQQ 477
+SN+GLF AEMSSD+ Q++GM+E GMLPA FA R KYG P + + S+ GV FL ++SF I+E LNFLY LLE +AF+KLR+ +PD+HRP+ +PL T GV+++ LP +I+++VL++ T++I ++ G L+ L K K+W F+P++
Sbjct: 333 MSNLGLFEAEMSSDAFQLLGMSEIGMLPAFFAQRSKYGTPTISILCSATGVIFLSWMSFQEIIEFLNFLYALGMLLEFAAFVKLRIKKPDLHRPYRVPLNTFGVSMLCLPPSLLVILVMVLAAPKTFLISGVIIVLGFCLYPFLTLVKEKQWATFIPEE 491
BLAST of mRNA_P-wetherbeei_contig13514.1.1 vs. uniprot
Match: A0A6A6L2Y9_HEVBR (Uncharacterized protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6L2Y9_HEVBR) HSP 1 Score: 144 bits (363), Expect = 7.940e-38 Identity = 77/168 (45.83%), Postives = 116/168 (69.05%), Query Frame = 1
Query: 1 VSNIGLFLAEMSSDSLQVMGMAERGMLPARFAVRGKYGMPLLGTIASSMGVFFLGFLSFTAIVEILNFLYCWAQLLELSAFIKLRMSRPDIHRPFAIPLGTVGVTLMLLPAFAFLIVLIVLSSLLTWIICLTLMAAGVGLWWLLETAKRKEWCEFVPQQESMHAHAVV 504
+SN+GLF AEMS D+ Q++GM+E GMLPA FA R KYG P + + S+ GV FL ++SF I+E LNFLY LLE +AFIKLR+ +P++HRP+ +PLGT G T++ LP A L++++ L+SL T++I ++ G L+ L AK ++W +F +Q ++ + V+
Sbjct: 263 MSNLGLFEAEMSGDAFQLLGMSEMGMLPAIFASRSKYGTPTVSILCSATGVIFLSWMSFQEILEFLNFLYAIGMLLEFAAFIKLRLKKPELHRPYKVPLGTFGATMLCLPPAALLVLVMCLASLRTFLISGAVIVLGFILYPTLIYAKDRKWTKFGTEQPAVPSGTVM 430 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13514.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13514.1.1 >prot_P-wetherbeei_contig13514.1.1 ID=prot_P-wetherbeei_contig13514.1.1|Name=mRNA_P-wetherbeei_contig13514.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=162bp MSSDSLQVMGMAERGMLPARFAVRGKYGMPLLGTIASSMGVFFLGFLSFTback to top mRNA from alignment at P-wetherbeei_contig13514:91..1338- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13514.1.1 ID=mRNA_P-wetherbeei_contig13514.1.1|Name=mRNA_P-wetherbeei_contig13514.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1248bp|location=Sequence derived from alignment at P-wetherbeei_contig13514:91..1338- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13514:91..1338- >mRNA_P-wetherbeei_contig13514.1.1 ID=mRNA_P-wetherbeei_contig13514.1.1|Name=mRNA_P-wetherbeei_contig13514.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=486bp|location=Sequence derived from alignment at P-wetherbeei_contig13514:91..1338- (Phaeothamnion wetherbeei SAG_119_79)back to top |