mRNA_P-wetherbeei_contig135.7.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig135.7.1
Unique NamemRNA_P-wetherbeei_contig135.7.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig135.7.1 vs. uniprot
Match: UPI001C3E472F (GMC family oxidoreductase N-terminal domain-containing protein n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3E472F)

HSP 1 Score: 843 bits (2177), Expect = 4.040e-306
Identity = 405/487 (83.16%), Postives = 432/487 (88.71%), Query Frame = 1
Query:    1 VRIIVCGAGTSGCVAAARLSQDPANEVVLLEVGPHYRAGEWPEALTHSHRIIKETHDWGYMARAGDSPRMVHVPRGRVVGGSSVTNGAIALRGHPEHYDEWDALVDGYGWESWLPWFRAIESDRDFAAADWHGGGGPIPISRYPRASWLELQERFCEAALAVGHLWVDDHNAPGAIGIGPIPLNMVDGIRQTPADLYLDPALSRPNLSLRAGILVDRVSVRGDRVSGVEVIGPDGAETIRADLVVMALGTYATPAALLRSGIGPAEELARHAIAPVAPLPGVGRGMQDHPKVSYRFDLALEAPPWPSPWYQCLLTGAHEVDGARRVYQVMPYSGQVEGGQRFTDLNVQVADARSRRGAVRLQSRDPADQPVIEMGWFLDPGDRAAAVAAGARLMEVARAAPLRDVLTPWPHLDDPDHVLRTVETFHHPVGSCRMGRDDDPDAVVDTEGRVRGIEGLRIMDASVLARVPSANTHLAVIALAERLCAPF 1461
            +RI+VCG GT+GCVAAARLS+DPA+EV LLEVGPHYR GEWP  L HSHRIIKETHDWGY ARAG SPR+VHVPRGRVVGGSSVTNGAIALRGHPEHYDEWD LVDG+GW+SWLPWFRAIE+DRDF  ADWHG  GPIP+ RYPR  W+E+QERF EAAL+ GH WVDDHNAPGA+GIGPIPLNMVDG RQTPAD YLDPAL+RPNL+LR G+LVDRV V GDRV  V V GPDG+  I AD VVMALGTYATPAALLRSGIGPA+E+ RH I PVA +PGVGRGMQDHPKVSYRF+LALEAPPWP+PWYQCLLTGAHEV G RRVYQVMPYSGQV+GGQRFTDLNVQVADARSRRGAVRLQ  DPA QP IEMGWFL+P DRAAAVAAG RLMEVAR   L  VLTPWP LDDPD VLRTVETFHHPVGSCRMGRDDDPDAVVD  GRVRG+EGL IMDASV+ARVPSANTHLAVIALAERLCA F
Sbjct:    1 MRIVVCGGGTAGCVAAARLSEDPAHEVTLLEVGPHYRPGEWPPELAHSHRIIKETHDWGYQARAGASPRLVHVPRGRVVGGSSVTNGAIALRGHPEHYDEWDDLVDGFGWDSWLPWFRAIEADRDFGDADWHGDAGPIPVGRYPRP-WMEMQERFAEAALSAGHGWVDDHNAPGAVGIGPIPLNMVDGRRQTPADRYLDPALARPNLTLRTGVLVDRVEVAGDRVRAVVVTGPDGSTEIPADAVVMALGTYATPAALLRSGIGPADEVGRHGITPVAEVPGVGRGMQDHPKVSYRFELALEAPPWPNPWYQCLLTGAHEVGGERRVYQVMPYSGQVDGGQRFTDLNVQVADARSRRGAVRLQGTDPALQPRIEMGWFLEPSDRAAAVAAGRRLMEVARQPALAAVLTPWPGLDDPDQVLRTVETFHHPVGSCRMGRDDDPDAVVDARGRVRGVEGLWIMDASVIARVPSANTHLAVIALAERLCAGF 486          
BLAST of mRNA_P-wetherbeei_contig135.7.1 vs. uniprot
Match: UPI0004258AFC (GMC family oxidoreductase N-terminal domain-containing protein n=1 Tax=Pseudonocardia spinosispora TaxID=103441 RepID=UPI0004258AFC)

HSP 1 Score: 601 bits (1550), Expect = 5.920e-211
Identity = 294/488 (60.25%), Postives = 356/488 (72.95%), Query Frame = 1
Query:    1 VRIIVCGAGTSGCVAAARLSQDPANEVVLLEVGPHYRAGEWPEALTHSHRIIKETHDWGYMARAGDSPRMVHVPRGRVVGGSSVTNGAIALRGHPEHYDEWDALVDGYGWESWLPWFRAIESDRDFAAADWHGGGGPIPISRYPRASWLELQERFCEAALAVGHLWVDDHNAPGAIGIGPIPLNMVDGIRQTPADLYLDPALSRPNLSLRAGILVDRVSVRGDRVSGVEVIGPDGA-ETIRADLVVMALGTYATPAALLRSGIGPAEELARHAIAPVAPLPGVGRGMQDHPKVSYRFDLALEAPPWPSPWYQCLLTGAHEVDGARRVYQVMPYSGQVEGGQRFTDLNVQVADARSRRGAVRLQSRDPADQPVIEMGWFLDPGDRAAAVAAGARLMEVARAAPLRDVLTPWPHLDDPDHVLRTVETFHHPVGSCRMGRDDDPDAVVDTEGRVRGIEGLRIMDASVLARVPSANTHLAVIALAERLCAPF 1461
            +RI++CGAGT+GCV A RL++D  NEVVLLE GPHYR G WPEAL H HRI+ E+HDWGY+A    S    HVPRGRVVGGSS TNG++ALRG PE Y  W   VDGY W SWLPWFR IE+DR+F +  +HG  GPI ISR+PR  WL+LQE F EAA+  GH WV DHN  GA+G+GP+PL+MVDG RQTPAD YLDPAL+R NL LR G+LVDR+  RG R +GV ++   GA + + AD V++ALGTYATPA LLRSGIGP  EL RH +  V  LPGVG  +QDH K+S RF L + AP   +PWYQCLLTG  EV+G RR YQV+PYSG +EG +  TDLNVQ+ DAR++RG+VRL+ RDPA  P IE+ W     D+AAAVAA   L ++AR APL  ++TP   + +P      V +FHHPVG+CRMG+D   DAVVD  G+V G++ L IMDASV+  +PSAN HL VIALAERL A F
Sbjct:    1 MRIVICGAGTAGCVVAGRLARDSRNEVVLLEAGPHYRPGSWPEALRHGHRIVTESHDWGYLADTEYSATGQHVPRGRVVGGSSATNGSVALRGRPEDYQRWGGAVDGYDWNSWLPWFRLIENDREFGSTPFHGSAGPISISRHPRP-WLQLQEYFAEAAVNAGHDWVADHNLAGALGVGPVPLSMVDGQRQTPADHYLDPALARENLELRTGVLVDRIRFRGGRATGVAIVDARGAADLVDADAVILALGTYATPAVLLRSGIGPVAELERHGVPIVESLPGVGANLQDHAKISCRFGLEIPAPAEGNPWYQCLLTGVTEVNGERRYYQVLPYSGYLEGDRSVTDLNVQICDARAQRGSVRLRGRDPAAPPRIELDWLPGASDQAAAVAAVGCLSDIARTAPLDRIVTPGEEMVEPHRFPYPVRSFHHPVGTCRMGKDGISDAVVDGRGKVWGLDRLWIMDASVIPYLPSANVHLTVIALAERLAASF 487          
BLAST of mRNA_P-wetherbeei_contig135.7.1 vs. uniprot
Match: A0A6G9YLU1_9NOCA (GMC_OxRdtase_N domain-containing protein n=2 Tax=Nocardia TaxID=1817 RepID=A0A6G9YLU1_9NOCA)

HSP 1 Score: 353 bits (906), Expect = 1.310e-113
Identity = 211/489 (43.15%), Postives = 287/489 (58.69%), Query Frame = 1
Query:    7 IIVCGAGTSGCVAAARLSQDPANEVVLLEVGPHY--RAGEWPEALTHSHRIIKETHDWGYMARAGDSPRMVHVPRGRVVGGSSVTNGAIALRGHPEHYDEWDALVD-GYGWESWLPWFRAIESDRDFAAADWHGGGGPIPISRYPRASWLELQERFCEAALAVGHLWVDDHNAPGAIGIGPIPLNMVDGIRQTPADLYLDPALSRPNLSLRAGILVDRVSVRGDRVSGVEVIGPDGAETIRADLVVMALGTYATPAALLRSGIGPAEELARHAIAPVAPLPGVGRGMQDHPKVSYRFDLAL-EAPPWPSPWYQCLLTGAHEVDGARRVYQVMPYSGQVEGGQRFTDLNVQVADARSRRGAVRLQSRDPADQPVIEMGWFLDPGDRAAAVAAGARLM-EVARAAPLRDVLTPWPHLDDPDHVLRT-VETFHHPVGSCRMGRDDDPDAVVDTEGRVRGIEGLRIMDASVLARVPSANTHLAVIALAERLCA 1455
            +I+ GAG++G V A RLS+     V+LLE GP +   A E P  LT    + +  +DWGY++      R + +  GRVVGGSS TN A+ALRG P  YD W    + G+G+   LP+FRA+E D DFA  +WHGG G + I+R  R  W  +Q  F +A +A G+  +DDHNAP A GIGPIP N +DG+RQ+ A  YL  A +RPNL++R G+ V+R+ + G R +GV +  P+  ET+ AD VV+A G Y +P  LLRSGIGPA EL    I     LPGVGR +QDHP +   F   L +A P   P    L    H+ D   +V+   P + +   G+    + + +  A S RGAVRL++  PA  P +     LD  D  A +  G RL  E+A   PL  +LTP     D + ++R    ++ HPVG+CRMG DDDP AV DT G VRGI+GL ++DAS +  +P ANT+L  + LAE+  A
Sbjct:    6 VIIIGAGSAGGVLADRLSEKLDRSVLLLEAGPDFGSTASELPIELTDITDLTETPYDWGYLSEPDLCDRRIPLAAGRVVGGSSATNNAMALRGRPSDYDSWAEFGNPGFGFADVLPYFRAVERDLDFAD-EWHGGSGAVTITRPGRDEWTPVQRAFADACVAAGYTAIDDHNAPHAQGIGPIPFNQLDGVRQSTALTYLAAARTRPNLTVRGGVRVERILLDGTRATGVLLAEPE--ETLYADRVVLAAGAYGSPLLLLRSGIGPAAELGESGIETAVDLPGVGRNLQDHPLLRLPFTTTLADATP---PLQNLLTCAVHDRDPELQVFPAGPATLE---GKSLCHMVIGLI-APSSRGAVRLRAGGPAITPGL-----LDHPDDLARMVTGVRLAREIAATEPLARMLTPCATDGDLETMVRAETASYQHPVGTCRMGPDDDPSAVTDTRGAVRGIDGLHVVDASTMPAIPRANTNLTTLMLAEKFAA 479          
BLAST of mRNA_P-wetherbeei_contig135.7.1 vs. uniprot
Match: A0A2A2YLK8_9ACTN (GMC_OxRdtase_N domain-containing protein n=2 Tax=unclassified Streptomyces TaxID=2593676 RepID=A0A2A2YLK8_9ACTN)

HSP 1 Score: 352 bits (903), Expect = 4.440e-113
Identity = 216/496 (43.55%), Postives = 286/496 (57.66%), Query Frame = 1
Query:    7 IIVCGAGTSGCVAAARLSQDPANEVVLLEVGPHY--RAGEWPEALTHSHRIIKETHDWGYMARAGDSPRMVHVPRGRVVGGSSVTNGAIALRGHPEHYDEWDALVD-GYGWESWLPWFRAIESDRDFAAADWHGGGGPIPISRYPRASWLELQERFCEAALAVGHLWVDDHNAPGAIGIGPIPLNMVDGIRQTPADLYLDPALSRPNLSLRAGILVDRVSVRGDRVSGVEVIGPDGAETIRADLVVMALGTYATPAALLRSGIGPAEELARHAIAPVAPLPGVGRGMQDHPKVSYRFDLALEAPPWPSPWYQCLLTGAHEVDGARRVYQVMPYSGQVEGGQRFTDLNVQVADARSRRGAVRLQSRDPADQPVIEMGWFLDPGDRAAAVAAGARLM-EVARAAPLRDVLTPW-PHLDDPDHVLRTVE-----TFHHPVGSCRMGRDDDPDAVVDTEGRVRGIEGLRIMDASVLARVPSANTHLAVIALAERLCAPFT 1464
            +IV GAG++G V A RLS DP   V+LLE GP +   A E P  +  +  + + ++DWGY +  G   R V +  GRVVGGSS TN A+ALRG P  YD W  L + G G+   LP+FR +E D DF   DWHG  GP+P+ R   A    +Q  F +A +A G+  V DHNAPGA G GP+P N V G+RQ+ A  YL  A  RPNL++R G+LV++V ++G R  GV +  P  AETI A LVV+A G Y +P  LLRSGIGPAEEL    I     LPGVGR ++DHP +   F   +   P  +P  Q +LT A   + A    Q+ P       G+    L V V   RSR G +RL++  P ++P I+    LD  D    + AG RL  E+A   PL  +LTP  P  D  D  L  +      ++ HPVG+CRMG + DP AV DT G VRG++GL ++DAS +  +P ANT+L  + LAER  A ++
Sbjct:    5 LIVVGAGSAGGVLADRLSADPDRSVLLLEAGPDFGTTAREQPAEIADADDLTETSYDWGYTSEPGAGGRRVPLFAGRVVGGSSATNNAMALRGQPADYDAWADLGNPGLGFADVLPYFRTVERDLDFTD-DWHGSAGPVPVKRPRPAELTPVQRAFTDACVAAGYPAVADHNAPGAHGAGPMPFNQVGGVRQSTALTYLAAARQRPNLTVRGGVLVEKVVLKGTRAVGVRLAEP--AETIHAGLVVLAAGAYGSPLLLLRSGIGPAEELREARIEARVDLPGVGRDLRDHPLLRLPFAATV---PEGTPALQTMLTCAGNGEEAGPDLQIFPAGPMAVDGESLCHLLVAVIAPRSR-GTLRLRADGPDNRPAIDPR-LLDHPDDLNRMVAGIRLAHEIADTGPLAALLTPGRPVRDATDADLAAMAHAQTASYQHPVGTCRMGPEHDPSAVTDTRGAVRGVDGLHVVDASTMPGIPRANTNLPTLMLAERFAAAWS 492          
BLAST of mRNA_P-wetherbeei_contig135.7.1 vs. uniprot
Match: A0A7C3QLZ3_9BACT (FAD-dependent oxidoreductase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C3QLZ3_9BACT)

HSP 1 Score: 349 bits (896), Expect = 8.600e-112
Identity = 211/494 (42.71%), Postives = 283/494 (57.29%), Query Frame = 1
Query:    7 IIVCGAGTSGCVAAARLSQDPANEVVLLEVGPHY-RAGEWPEALTHSHRIIKETHDWGYMARAGDSPRMVHVPRGRVVGGSSVTNGAIALRGHPEHYDEWDALVD-GYGWESWLPWFRAIESDRDFAAADWHGGGGPIPISRYPRASWLELQERFCEAALAVGHLWVDDHNAPGAIGIGPIPLNMVDGIRQTPADLYLDPALSRPNLSLRAGILVDRVSVRGDRVSGVEVIGPDGAETIRADLVVMALGTYATPAALLRSGIGPAEELARHAIAPVAPLPGVGRGMQDHPKVSYRFDLALEAPPWPSPWYQCLLTGAHEVDGARRVY--QVMPYSGQVEG--GQRFTDLNVQVADARSRRGAVRLQSRDPADQPVIEMGWFLDPGDRAAAVAAGARLMEVARAAPLRDVL-------TPWP-HLDDPDHVLRTVETFHHPVGSCRMGRDDDPDAVVDTEGRVRGIEGLRIMDASVLARVPSANTHLAVIALAER 1446
            +I+ GAG++GCV AARLS+D    V+LLE GP Y  A   P  ++ SHR    THDWGY +  G   R +H+PR ++VGG S TN  IALRG P  YDEW AL + G+ +   LP+FR +E D D    +WHG  GP+PI RY        Q  F +A  A G+   DDHNAPGA+G GP P+N V G+RQ+ A  YL  A  R NL++R+G+LVDRV     R +GV +  P  AE I AD V++A G Y +P  L+RSG+GPA++L    IAP+  L GVG+ + DHP     F     A     P +Q +LT      G  + Y  QV+P S   EG  G     L V V   RSR G VRL+S  P   P+I++G+F  P D    + A      +A+ +P+ D +       + W   +D    +L  V T+HHPVG+C MG   +P AVVD  G V G+ GL ++DAS++  +P+ANT+L  I +AER
Sbjct:    5 VIIVGAGSAGCVLAARLSEDSRRSVLLLEAGPDYPNAAALPTEISTSHRPAF-THDWGYASEPGARGRAIHLPRAKLVGGCSATNATIALRGAPGDYDEWAALGNPGWSFAEVLPFFRRLEHDAD-VDDEWHGRDGPLPIRRYAPDELTPAQRAFLDACAASGYPRTDDHNAPGALGAGPAPMNTVAGVRQSTALTYLAAARGRRNLTIRSGVLVDRVLFERRRAAGVRLAQP--AEDINADHVILAAGAYNSPVILMRSGLGPADDLRALGIAPLEDLAGVGQNLVDHPLFGLSFATRRPAQADQMPAFQTVLT--FRSSGTVQGYDLQVLPMSTFPEGCGGAAGFTLLVSVLKPRSR-GQVRLRSSSPTAAPLIDLGYFTHPDDMPRMIEAVRAARRLAQTSPMSDWIIGESYPSSVWDADVDLEGAILDGVATYHHPVGTCAMGPAREPGAVVDHRGDVHGVRGLSVIDASIMPAIPAANTNLPTIMVAER 491          
BLAST of mRNA_P-wetherbeei_contig135.7.1 vs. uniprot
Match: UPI001F5CE3F7 (GMC family oxidoreductase N-terminal domain-containing protein n=1 Tax=Streptomyces sp. MST-110588 TaxID=2833628 RepID=UPI001F5CE3F7)

HSP 1 Score: 343 bits (879), Expect = 8.040e-109
Identity = 215/520 (41.35%), Postives = 286/520 (55.00%), Query Frame = 1
Query:    7 IIVCGAGTSGCVAAARLSQDPANEVVLLEVGPHY--RAGEWPEALTHSHRIIKETHDWGYMARAGDSPRMVHVPRGRVVGGSSVTNGAIALRGHPEHYDEWDALVD-GYGWESWLPWFRAIESDRDFAAADWHGGGGPIPISRYPRASWLELQERFCEAALAVGHLWVDDHNAPGAIGIGPIPLNMVDGIRQTPADLYLDPALSRPNLSLRAGILVDRVSVRGDRVSGVEVIGPDGAETIRADLVVMALGTYATPAALLRSGIGPAEELARHAIAPVAPLPGVGRGMQDHPKVSYRFDLALEAPPWP-SPWYQCLLT------------------GAHEVDGARRV--------YQVMPYSGQVE--GGQRFTDLNVQVADARS-RRGAVRLQSRDPADQPVIEMGWFLDPGDRAAAVAAGARLMEVARAAPLRDVL----TPWPHLDDPDHVL----RTVETFHHPVGSCRMGRDDDPDAVVDTEGRVRGIEGLRIMDASVLARVPSANTHLAVIALAE 1443
            +IV GAG++G V A+RLS+DP+  V+LLE GP Y       PE +  S      THDWG+ +  G   R V +PRG++VGGSS  N AIALRG P  YD W A  + G+ +   LP FR +E D DFA   WHG  GP+P+ R+      E Q  F +A +A+GH  V DHNAPGA G+GP+P+N VDG+RQ+ A  YL  A  R NL++R  +LVDRV VRG R  GV +  P G E +RA  V++A GTY +P  L+RSGIGPA  L    I  +A LPGVG  +QDHP V+  F   + AP  P  P  Q  LT                  GA ++               Q+ P   + +  GG R + + + VA  R    G + L+S DP   P I++G+  DP D    V        +A   PL D+L    +P P +  P+ +     RTV  + H  G+CRMG  DDP+AVV   G V G+E L ++DASV+  +P+ANTHL  +A+AE
Sbjct:   10 VIVVGAGSAGGVLASRLSEDPSRSVLLLEAGPDYGTTVAGLPEDVATS-PASTHTHDWGFTSEPGALGRPVSLPRGKLVGGSSAINSAIALRGQPGDYDNWAAGGNTGWSFADLLPAFRRVERDLDFAGP-WHGAQGPVPVRRHGPGELNEPQRAFHDACVALGHPVVTDHNAPGACGVGPVPVNRVDGVRQSTALTYLARARDRANLTVRGQVLVDRVLVRGGRARGVRLADPQGTE-LRAGQVILAAGTYGSPPVLMRSGIGPAHHLRDLGIPVLADLPGVGGNLQDHPAVTLTFTGTVPAPADPREPVLQTFLTCRVGEERNDAGPSGTAALGASDLTAGPGTAGPSCAPDLQIFPQGPEADPDGGPRESVVTLWVALLRPYSTGRLLLRSPDPRHAPRIDVGFLRDPRDSHRLVEGMRLARRIAATPPLADLLRAERSPGPGVSTPEELTEALRRTVSGYQHAAGTCRMGPYDDPEAVVSPTGAVHGVEALYVIDASVMPGLPAANTHLTTMAIAE 526          
BLAST of mRNA_P-wetherbeei_contig135.7.1 vs. uniprot
Match: A0A0K3ATZ2_9PSEU (Choline dehydrogenase n=1 Tax=Kibdelosporangium sp. MJ126-NF4 TaxID=703222 RepID=A0A0K3ATZ2_9PSEU)

HSP 1 Score: 333 bits (853), Expect = 1.820e-105
Identity = 209/494 (42.31%), Postives = 278/494 (56.28%), Query Frame = 1
Query:    7 IIVCGAGTSGCVAAARLSQDPANEVVLLEVGPHYRA--GEWPEALTHSHRIIKETHDWGYMARAGDSPRMVHVPRGRVVGGSSVTNGAIALRGHPEHYDEWDALVDGYGWESWLPWFRAIESDRDFAAADWHGGGGPIPISRYPRASWLELQERFCEAALAVGHLWVDDHNAPGAIGIGPIPLNMVDGIRQTPADLYLDPALSRPNLSLRAGILVDRVSVRGDRVSGVEVIGPDGAETIRADLVVMALGTYATPAALLRSGIGPAEELARHAIAPVAPLPGVGRGMQDHP--KVSYRFDLALEAPPWPSPWYQCLLTGAHEVDGARRVYQVMPYSGQVEGGQRFTDLNVQVAD-ARSRRGAVRLQSRDPADQPVIEMGWFLDPGDRAAAVAAGARLMEVARAAPLRDVLTP--WPHLD---DPD---HVLRTVETFHHPVGSCRMGRDDDPDAVVDTEGRVRGIEGLRIMDASVLARVPSANTHLAVIALAERL 1449
            +IV GAG++G V A+RLSQDP   V+L+E GP Y +     P+A+  ++       DWGY A   +  R   V  GR+VGGSS TN A+ALRGHP  +D W    +G+ ++S L  F A+E+D DF    WHG  GPI ++R   A    + E F  A  A GH    DHNAPGA+G GPIP N VDG+RQ+ A  YL  A  RPNLS+RAG  VDRV +   R SGV +   D  + +RA  V++A G Y +PA LLRSG+GPA +L    IA  A  PGVG  + DHP  ++ YR +     PP      Q LLT   +   A    QV P+ G V G     +L + VA  + + RG V+L   +P+  P I++G   DP D    +       ++A  +PL D +T   WP  +   D D    +   V  + HPVG+CRMG  DDP AVVD  G V GI GLR+ DAS++  +P ANT+L+ +A+AE L
Sbjct:    9 VIVVGAGSAGGVLASRLSQDPQRSVLLVEAGPDYGSVPSGQPDAVRDAYDTGPTEWDWGYQATWSNGTRESPVFAGRLVGGSSATNNAMALRGHPSDFDRWG---NGWSFDSVLASFLALENDTDFGHTAWHGDTGPITVTRPRTARLGPVHEAFLAACDACGHARTPDHNAPGAVGAGPIPFNAVDGVRQSTALTYLAHARERPNLSIRAGNAVDRVFIENGRASGVVL---DNGDIVRAQQVILAAGAYGSPAVLLRSGVGPARQLRDLGIAVHADRPGVGANLHDHPLLRLRYRTNTPSSDPP-----LQSLLTLTRDSVPA---VQVFPH-GPVIGADGSAELTLLVALLSPASRGHVQLDPANPSGLPHIDVGLLTDPADPPRLLDGVRAARQLADTSPLSDHITAELWPGTEVVADTDVAAAIAAEVNVYQHPVGTCRMGAADDPHAVVDHAGNVFGIAGLRVADASIMPVIPRANTNLSTMAVAEEL 487          
BLAST of mRNA_P-wetherbeei_contig135.7.1 vs. uniprot
Match: UPI0018CA49D1 (Choline dehydrogenase n=2 Tax=Actinomadura viridis TaxID=58110 RepID=UPI0018CA49D1)

HSP 1 Score: 331 bits (849), Expect = 9.990e-105
Identity = 203/503 (40.36%), Postives = 266/503 (52.88%), Query Frame = 1
Query:   10 IVCGAGTSGCVAAARLSQDPANEVVLLEVGPHYRA--GEWPEALTHSHRIIKETHDWGYMARAGDSPRMVHVPRGRVVGGSSVTNGAIALRGHPEHYDEWD-ALVDGYGWESWLPWFRAIESDRDFAAADWHGGGGPIPISRYPRASWLELQERFCEAALAVGHLWVDDHNAPGAIGIGPIPLNMVDGIRQTPADLYLDPALSRPNLSLRAGILVDRVSVRGDRVSGVEVIGPDGAETIRADLVVMALGTYATPAALLRSGIGPAEELARHAIAPVAPLPGVGRGMQDHPKVSYRFDLALEAPPWPSPWYQCLLTGAHEVDGARRVYQVMPYSGQVE--GGQRFTDLNVQVADARSRRGAVRLQSRDPADQPVIEMGWFLDPGDRAAAVAAGARLMEVARAAPLR----DVLTPWPHLDDPDHVLRTVET----FHHPVGSCRMGRDDDPDAVVDTEGRVRGIEGLRIMDASVLARVPSANTHLAVIALAERLCAPFTRGAGV 1479
            +V G G++G V AARLS+DP   V+LLE GP + A    WP  +T +       +DWG     G + R   V  GRV+GG S TN  +ALRGHP+ +  W+   + G+ +   LP +R +E D DFA  DWHG  GP+P+ R   A        F E+   +GH  +DDHNAPGA G GP+P N V  +RQT A  YL  A  RPNL +      +R+ +   R  GV + G   AE + A  VV+  G Y TPA L+RSG+GPA  L R  +     LPGVG G+QDHP V  RF +   A P      Q LLT   +        Q+MP +G V    G  F  L V + + RSR G VRL+  DP   P I++G   DP D +  +        +A A PL       L P P ++    +   V      +HHPVG+CRMG   DP AVVD  GRV G+ GL + DASV+  +P ANTHL V+ +AER+      GAG+
Sbjct:   16 VVVGGGSAGAVLAARLSRDPGRTVLLLEAGPDFGADPAAWPPEITDAGEASATGYDWGLEGELGATGRRHPVYAGRVLGGGSATNNVVALRGHPDDFAGWERGGLPGWSFPDVLPAYRRLERDLDFAGYDWHGADGPMPVRRPGAAEPAPEHRAFLESCAELGHPLIDDHNAPGAAGAGPLPQNEVGRVRQTTALTYLAAARDRPNLRILPDTTAERILIEDGRARGVLLAG--AAEPVLAGRVVLCAGAYGTPALLMRSGVGPAAHLERAGVPVACDLPGVGEGLQDHPLVPLRFAVPGTARPAMG---QTLLTLRSDAGDGAPDLQIMP-AGPVPTPDGTVFL-LFVALLEPRSR-GRVRLRPADPGGPPDIDVGVLRDPADLSRIITGIRHARRLAAAGPLARRLDGELWPGPAVESDTGLAEAVREQLTLYHHPVGTCRMGTSADPGAVVDGAGRVHGVAGLLVADASVMPAIPRANTHLTVLMIAERIAGNLEEGAGL 510          
BLAST of mRNA_P-wetherbeei_contig135.7.1 vs. uniprot
Match: A0A0M8RLN8_9ACTN (Uncharacterized protein n=20 Tax=Streptomyces TaxID=1883 RepID=A0A0M8RLN8_9ACTN)

HSP 1 Score: 330 bits (847), Expect = 1.240e-104
Identity = 206/492 (41.87%), Postives = 271/492 (55.08%), Query Frame = 1
Query:    7 IIVCGAGTSGCVAAARLSQDPANEVVLLEVGPHYRAGEWPEALTH---SHRIIKETHDWGYMARAGDSPRMVHVPRGRVVGGSSVTNGAIALRGHPEHYDEWDALV-DGYGWESWLPWFRAIESDRDFAAADWHGGGGPIPISRYPRASWLELQERFCEAALAVGHLWVDDHNAPGAIGIGPIPLNMVDGIRQTPADLYLDPALSRPNLSLRAGILVDRVSVRGDRVSGVEVIGPDGAETIRADLVVMALGTYATPAALLRSGIGPAEELARHAIAPVAPLPGVGRGMQDHPKVSYRFDLALEAPPWPSPWYQCLLTGAHEVDGARRVYQVMPYSGQVEGGQRFTDLNVQVADAR-SRRGAVRLQSRDPADQPVIEMGWFLDPGDRAAAVAAGARLMEVARAAPLRDVL----TPWPHLDDPDHVLRT----VETFHHPVGSCRMGRDDDPDAVVDTEGRVRGIEGLRIMDASVLARVPSANTHLAVIALAE 1443
            +IV GAG++G V A RL++DPA  V+LLE GP Y  G  P+ L     +      +HDWGY +  G   R V +PRG++VGGSS  N AIALRGHP+ YD+W A   +G+ +  +LP  R +E D D A   WHG  GP+P+ RY        Q  F +A  A+GH  V+DHNAPGA G+GP+P+N V G+RQ+ A  YL  A  R NL++R  +LVDRV +R  R  GV++  P     + A  VV+A G Y +P  LLRSG+GPA  L    I  VA LPGVG  ++DHP V+  +      P    P  Q  LT            QV P SG   G    T L   VA  R S  G + L+S DP D P I++G+  DP D    VA       +AR APL  +L     P P +   + +       V  + H  G+CRMG  +DP AVV   G V G+E L ++DASV+  +P+ANT+L  +ALAE
Sbjct:    6 VIVVGAGSAGGVLADRLTEDPARSVLLLEAGPDY--GSSPDGLPDDVATSPAATHSHDWGYASEPGALGRSVGLPRGKLVGGSSAINSAIALRGHPQDYDDWAAQGNEGWSFAGFLPSLRRVERDLDLATR-WHGTDGPVPVGRYGPDETNRWQRAFHDACTALGHPPVEDHNAPGACGVGPVPVNRVGGVRQSTALTYLARARERANLTVRGDVLVDRVVLRDGRAVGVQLADP-ARTVLPARRVVLAAGAYGSPPILLRSGLGPAAHLRDLGIPVVADLPGVGENLRDHPAVTLTYATDAPPPGPRDPVLQTFLTCDLNCGDGPVDLQVFP-SGPEAGEDGSTVLTFWVALLRPSSCGRLWLRSADPRDAPRIDVGFLSDPEDGRRMVAGMRLARSLARTAPLSGLLGEERAPGPAVTTDEQLAEALRQGVSGYQHAAGTCRMGPAEDPGAVVSATGAVHGVEALDVIDASVMPTLPAANTNLTTMALAE 492          
BLAST of mRNA_P-wetherbeei_contig135.7.1 vs. uniprot
Match: A0A7W7W155_9ACTN (Choline dehydrogenase n=1 Tax=Lipingzhangella halophila TaxID=1783352 RepID=A0A7W7W155_9ACTN)

HSP 1 Score: 331 bits (849), Expect = 1.640e-104
Identity = 209/502 (41.63%), Postives = 278/502 (55.38%), Query Frame = 1
Query:    7 IIVCGAGTSGCVAAARLSQDPANEVVLLEVGPHYRAG-EWPEALTHSHRIIKE---THDWGYMA--RAGDSPRMVHVPRGRVVGGSSVTNGAIALRGHPEHYDEWDALVD-GYGWESWLPWFRAIESDRDFAAADWHGGGGPIPISRYPRASWLELQERFCEAALAVGHLWVDDHNAPGAIGIGPIPLNMVDGIRQTPADLYLDPALSRPNLSLRAGILVDRVSVRGDRVSGVEVIGPDGAETIRADLVVMALGTYATPAALLRSGIGPAEELARHAIAPVAPLPGVGRGMQDHPKVSYRFDLALEAPPWPSPWYQCLLTGAHEVDGAR-----RVYQVMPYSGQVEG-GQRFTDLNVQVADARSRRGAVRLQSRDPADQPVIEMGWFLDPGDRAAAVAAGARLMEVARAAPLRD----VLTPWPHLDDPD----HVLRTVETFHHPVGSCRMGRDDDPDAVVDTEGRVRGIEGLRIMDASVLARVPSANTHLAVIALAERL 1449
            ++V GAG++GCV AARLSQDP+ EV+LLE GP Y    + P  +    R+  +   +HDWG+ +  R         +PRG +VGGSS  NG  ALRG  E YD W+A  + G+GW   L  FR +E+D DF    WHG  GP+P+ RY      EL   F  AA  VGH  V DHN PG++G GP+P+N  D +R + A  +L+PA +RPNL++R G   DR+ + G R  GV +   DG E I ADLVV+A G YA+P  LLRSGIG A EL    I PV  LPGVG  + DH  V+   D+ + A P   P YQ ++T     DGA       ++   P+  +  G G +   + V + D  SR G V L S DPA    I+ G+   P D    +A   +  E+ +  PL       L P     D       +LR   T+HHPVG+CRMG D    AVVD  GR+ G+EGL + DAS++  +P ANT+L  + LAER+
Sbjct:   12 VVVIGAGSAGCVLAARLSQDPSREVLLLEAGPDYPTRRQLPIDIADGSRLPSDRSLSHDWGWSSTPRTDGGVPTTPLPRGWLVGGSSAVNGTFALRGVAEDYDVWEAAGNPGWGWAEALEGFRRLETDLDFGDRPWHGAEGPVPVRRYAPDEQSELTRAFLAAAHRVGHAVVSDHNEPGSVGAGPLPVNTHDRLRMSAALTHLEPARTRPNLTVR-GHEPDRLEIAGGRAQGVRLA--DG-EVIGADLVVLAAGAYASPGVLLRSGIGAAGELRVLGIDPVVDLPGVGHNLVDHVLVTV--DVPIHAEPATRPHYQAMVTSRS--DGATGPPDLHLFAAGPFDARHVGDGMQLAPVAVGLLDPASR-GRVWLTSADPATPVAIDPGYLTHPHDLQRLIAGVHQTREILQTDPLSSRVGSELQPGAEGGDDAGLRADLLRQARTYHHPVGTCRMGPDPGEGAVVDAAGRLHGLEGLVLADASIMPAIPRANTNLPTLMLAERI 504          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig135.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001C3E472F4.040e-30683.16GMC family oxidoreductase N-terminal domain-contai... [more]
UPI0004258AFC5.920e-21160.25GMC family oxidoreductase N-terminal domain-contai... [more]
A0A6G9YLU1_9NOCA1.310e-11343.15GMC_OxRdtase_N domain-containing protein n=2 Tax=N... [more]
A0A2A2YLK8_9ACTN4.440e-11343.55GMC_OxRdtase_N domain-containing protein n=2 Tax=u... [more]
A0A7C3QLZ3_9BACT8.600e-11242.71FAD-dependent oxidoreductase n=1 Tax=Planctomycete... [more]
UPI001F5CE3F78.040e-10941.35GMC family oxidoreductase N-terminal domain-contai... [more]
A0A0K3ATZ2_9PSEU1.820e-10542.31Choline dehydrogenase n=1 Tax=Kibdelosporangium sp... [more]
UPI0018CA49D19.990e-10540.36Choline dehydrogenase n=2 Tax=Actinomadura viridis... [more]
A0A0M8RLN8_9ACTN1.240e-10441.87Uncharacterized protein n=20 Tax=Streptomyces TaxI... [more]
A0A7W7W155_9ACTN1.640e-10441.63Choline dehydrogenase n=1 Tax=Lipingzhangella halo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig135contigP-wetherbeei_contig135:8054..9544 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1463936.JOJI01000061_gene7230
PFAMsGMC_oxred_C,GMC_oxred_N
Model size1491
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue2.44e-102
EggNOG OGsCOG2303@1|root,COG2303@2|Bacteria,2GJAU@201174|Actinobacteria
DescriptionInvolved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
Cds size1491
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185987.8430727-CDS-P-wetherbeei_contig135:8053..95441683185987.8430727-CDS-P-wetherbeei_contig135:8053..9544Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig135 8054..9544 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig135.7.1prot_P-wetherbeei_contig135.7.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig135 8054..9544 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig135.7.1

>prot_P-wetherbeei_contig135.7.1 ID=prot_P-wetherbeei_contig135.7.1|Name=mRNA_P-wetherbeei_contig135.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=497bp
VRIIVCGAGTSGCVAAARLSQDPANEVVLLEVGPHYRAGEWPEALTHSHR
IIKETHDWGYMARAGDSPRMVHVPRGRVVGGSSVTNGAIALRGHPEHYDE
WDALVDGYGWESWLPWFRAIESDRDFAAADWHGGGGPIPISRYPRASWLE
LQERFCEAALAVGHLWVDDHNAPGAIGIGPIPLNMVDGIRQTPADLYLDP
ALSRPNLSLRAGILVDRVSVRGDRVSGVEVIGPDGAETIRADLVVMALGT
YATPAALLRSGIGPAEELARHAIAPVAPLPGVGRGMQDHPKVSYRFDLAL
EAPPWPSPWYQCLLTGAHEVDGARRVYQVMPYSGQVEGGQRFTDLNVQVA
DARSRRGAVRLQSRDPADQPVIEMGWFLDPGDRAAAVAAGARLMEVARAA
PLRDVLTPWPHLDDPDHVLRTVETFHHPVGSCRMGRDDDPDAVVDTEGRV
RGIEGLRIMDASVLARVPSANTHLAVIALAERLCAPFTRGAGVQTT*
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mRNA from alignment at P-wetherbeei_contig135:8054..9544-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig135.7.1 ID=mRNA_P-wetherbeei_contig135.7.1|Name=mRNA_P-wetherbeei_contig135.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1491bp|location=Sequence derived from alignment at P-wetherbeei_contig135:8054..9544- (Phaeothamnion wetherbeei SAG_119_79)
GTGAGGATCATCGTCTGCGGCGCCGGCACCTCCGGCTGCGTCGCCGCGGC GCGCCTGTCCCAGGACCCGGCCAACGAGGTCGTCCTGCTGGAGGTGGGTC CGCACTACCGGGCCGGTGAGTGGCCCGAGGCGCTCACCCACTCCCACCGG ATCATCAAGGAGACCCACGACTGGGGCTACATGGCCCGGGCAGGCGACTC GCCGCGGATGGTCCACGTTCCACGCGGCCGGGTGGTGGGCGGCTCGTCGG TCACCAATGGTGCGATCGCCCTGCGCGGGCATCCCGAGCACTACGACGAG TGGGACGCGCTCGTCGACGGCTACGGCTGGGAGAGCTGGCTGCCCTGGTT CCGCGCGATCGAGTCCGACCGCGACTTCGCCGCGGCCGACTGGCACGGTG GAGGGGGGCCGATACCCATCAGTCGCTATCCGCGCGCATCGTGGCTCGAG CTGCAGGAGCGCTTCTGCGAGGCGGCTCTGGCGGTCGGACACCTGTGGGT CGACGATCACAACGCCCCCGGCGCGATCGGCATCGGGCCGATCCCGCTCA ACATGGTGGACGGCATCCGCCAGACCCCGGCGGATCTCTATCTCGACCCC GCGCTCTCGCGCCCCAACCTGAGCCTGCGGGCCGGGATCCTGGTCGATCG CGTGAGCGTGCGCGGCGATCGGGTCAGCGGGGTCGAGGTGATCGGCCCCG ACGGCGCCGAGACCATCCGCGCCGACCTCGTCGTGATGGCGCTCGGGACC TATGCCACCCCGGCGGCGCTCCTGCGCTCGGGGATCGGCCCGGCCGAGGA GCTCGCCCGGCACGCCATCGCCCCCGTCGCCCCGCTCCCCGGAGTGGGGC GCGGGATGCAGGACCACCCCAAGGTCTCGTACCGGTTCGACCTGGCGCTC GAGGCGCCCCCGTGGCCGAGCCCCTGGTACCAGTGCCTCCTGACCGGCGC CCACGAGGTCGACGGCGCGCGGCGTGTCTACCAGGTCATGCCCTACTCCG GACAGGTGGAGGGCGGTCAGCGATTCACCGATCTCAACGTCCAGGTGGCC GATGCGCGCTCCCGCCGCGGCGCCGTGCGATTGCAGAGCCGTGACCCCGC CGACCAGCCCGTGATCGAGATGGGCTGGTTCCTGGATCCGGGCGACCGCG CGGCAGCCGTCGCGGCCGGCGCGCGCCTGATGGAGGTCGCGCGCGCGGCA CCACTTCGCGACGTTCTCACGCCATGGCCCCATCTGGACGATCCCGACCA TGTTCTTCGCACCGTCGAGACCTTCCACCACCCGGTCGGCAGCTGCCGGA TGGGACGCGACGACGACCCGGATGCGGTCGTGGACACAGAGGGGCGCGTG CGCGGGATCGAGGGACTGAGGATCATGGACGCGTCGGTTCTCGCCCGCGT GCCGTCGGCGAACACCCATCTGGCCGTGATCGCCCTCGCCGAGCGCCTCT GCGCCCCCTTCACCCGTGGTGCAGGAGTGCAAACGACATAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig135:8054..9544-

>mRNA_P-wetherbeei_contig135.7.1 ID=mRNA_P-wetherbeei_contig135.7.1|Name=mRNA_P-wetherbeei_contig135.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1491bp|location=Sequence derived from alignment at P-wetherbeei_contig135:8054..9544- (Phaeothamnion wetherbeei SAG_119_79)
GTGAGGATCATCGTCTGCGGCGCCGGCACCTCCGGCTGCGTCGCCGCGGC
GCGCCTGTCCCAGGACCCGGCCAACGAGGTCGTCCTGCTGGAGGTGGGTC
CGCACTACCGGGCCGGTGAGTGGCCCGAGGCGCTCACCCACTCCCACCGG
ATCATCAAGGAGACCCACGACTGGGGCTACATGGCCCGGGCAGGCGACTC
GCCGCGGATGGTCCACGTTCCACGCGGCCGGGTGGTGGGCGGCTCGTCGG
TCACCAATGGTGCGATCGCCCTGCGCGGGCATCCCGAGCACTACGACGAG
TGGGACGCGCTCGTCGACGGCTACGGCTGGGAGAGCTGGCTGCCCTGGTT
CCGCGCGATCGAGTCCGACCGCGACTTCGCCGCGGCCGACTGGCACGGTG
GAGGGGGGCCGATACCCATCAGTCGCTATCCGCGCGCATCGTGGCTCGAG
CTGCAGGAGCGCTTCTGCGAGGCGGCTCTGGCGGTCGGACACCTGTGGGT
CGACGATCACAACGCCCCCGGCGCGATCGGCATCGGGCCGATCCCGCTCA
ACATGGTGGACGGCATCCGCCAGACCCCGGCGGATCTCTATCTCGACCCC
GCGCTCTCGCGCCCCAACCTGAGCCTGCGGGCCGGGATCCTGGTCGATCG
CGTGAGCGTGCGCGGCGATCGGGTCAGCGGGGTCGAGGTGATCGGCCCCG
ACGGCGCCGAGACCATCCGCGCCGACCTCGTCGTGATGGCGCTCGGGACC
TATGCCACCCCGGCGGCGCTCCTGCGCTCGGGGATCGGCCCGGCCGAGGA
GCTCGCCCGGCACGCCATCGCCCCCGTCGCCCCGCTCCCCGGAGTGGGGC
GCGGGATGCAGGACCACCCCAAGGTCTCGTACCGGTTCGACCTGGCGCTC
GAGGCGCCCCCGTGGCCGAGCCCCTGGTACCAGTGCCTCCTGACCGGCGC
CCACGAGGTCGACGGCGCGCGGCGTGTCTACCAGGTCATGCCCTACTCCG
GACAGGTGGAGGGCGGTCAGCGATTCACCGATCTCAACGTCCAGGTGGCC
GATGCGCGCTCCCGCCGCGGCGCCGTGCGATTGCAGAGCCGTGACCCCGC
CGACCAGCCCGTGATCGAGATGGGCTGGTTCCTGGATCCGGGCGACCGCG
CGGCAGCCGTCGCGGCCGGCGCGCGCCTGATGGAGGTCGCGCGCGCGGCA
CCACTTCGCGACGTTCTCACGCCATGGCCCCATCTGGACGATCCCGACCA
TGTTCTTCGCACCGTCGAGACCTTCCACCACCCGGTCGGCAGCTGCCGGA
TGGGACGCGACGACGACCCGGATGCGGTCGTGGACACAGAGGGGCGCGTG
CGCGGGATCGAGGGACTGAGGATCATGGACGCGTCGGTTCTCGCCCGCGT
GCCGTCGGCGAACACCCATCTGGCCGTGATCGCCCTCGCCGAGCGCCTCT
GCGCCCCCTTCACCCGTGGTGCAGGAGTGCAAACGACATAA
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