mRNA_P-wetherbeei_contig13498.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13498.1.1
Unique NamemRNA_P-wetherbeei_contig13498.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13498.1.1 vs. uniprot
Match: A0A4P5U987_9BURK (D-galactarolactone cycloisomerase n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A4P5U987_9BURK)

HSP 1 Score: 648 bits (1671), Expect = 5.160e-233
Identity = 317/381 (83.20%), Postives = 349/381 (91.60%), Query Frame = 1
Query:    1 LKIADIRIHVLKSPLAEPFAFSQGWVRQRSATLVEMITDEGITGWGEAFAQGLEPPEIAAAAIEHALKPLLIGADPLATEVLWHRMYHATRDYGRKGSVVAAISAVDIALWDIAGRARGEPVHKLLGGAFRNRVEPYATGFYRIKGQGEAARLAEEAVRHHEAGFRYMKVKLGYGVDDDIACMQAIGRAIEGRAITLMIDTNHAYGRAEALQLGRALADCKLRWYEEPVAPEDLRGYAEMREKLAMPIAGGENEHTMYGYRELFAAGAVDIAQPDLGSCGGITAARHIIALAQSHGVAVNPHVWGSAIAQAASLQVIAALPVAHHSLFAQEPVFEYDRSSHPFRQLLITEPILQQDGWVAIPDGPGLGVEIDRAVLEKYRA 1143
            +KI +IR+HVLKS LA+PFAFSQGWVRQRSATLVE++TD G+ GWGEAFAQGLEPPEIAAAAIEHALKPLL+GA+PLATEVLWHRMYHATRDYGRKGSVVAAISA+DIALWDIAG+A G P++ LLGGAFR +V PYATGFYRI+GQGEAARLA EA+ H EAGF+ MKVKLGYGV DDIACM AIGRAIEGR I LM+DTNHAYGRA+AL+LGRALAD  L WYEEPVAPEDLRGYAEMREKL MPIAGGENEHT+YGYREL AA A+DIAQPDLGSCGG++AARHI ALAQ+HGVAVNPHVWGSAIAQAASLQ+IAALP+ HH+LFAQ PV EYDRSSHPFRQ LIT+PI+QQ GWV IP GPGLGVE+DRAVL +YRA
Sbjct:    1 MKITEIRVHVLKSALAQPFAFSQGWVRQRSATLVEVLTDAGLIGWGEAFAQGLEPPEIAAAAIEHALKPLLLGANPLATEVLWHRMYHATRDYGRKGSVVAAISALDIALWDIAGKAYGVPIYALLGGAFRTQVAPYATGFYRIQGQGEAARLAAEAIEHSEAGFQMMKVKLGYGVADDIACMTAIGRAIEGRGIRLMVDTNHAYGRADALRLGRALADYDLLWYEEPVAPEDLRGYAEMREKLTMPIAGGENEHTLYGYRELLAADALDIAQPDLGSCGGLSAARHITALAQAHGVAVNPHVWGSAIAQAASLQLIAALPITHHALFAQGPVLEYDRSSHPFRQQLITQPIVQQGGWVQIPHGPGLGVEVDRAVLARYRA 381          
BLAST of mRNA_P-wetherbeei_contig13498.1.1 vs. uniprot
Match: A0A315DSK1_9BURK (Mandelate racemase n=1 Tax=Limnohabitans sp. 2KL-51 TaxID=1977911 RepID=A0A315DSK1_9BURK)

HSP 1 Score: 645 bits (1665), Expect = 4.390e-232
Identity = 315/381 (82.68%), Postives = 348/381 (91.34%), Query Frame = 1
Query:    1 LKIADIRIHVLKSPLAEPFAFSQGWVRQRSATLVEMITDEGITGWGEAFAQGLEPPEIAAAAIEHALKPLLIGADPLATEVLWHRMYHATRDYGRKGSVVAAISAVDIALWDIAGRARGEPVHKLLGGAFRNRVEPYATGFYRIKGQGEAARLAEEAVRHHEAGFRYMKVKLGYGVDDDIACMQAIGRAIEGRAITLMIDTNHAYGRAEALQLGRALADCKLRWYEEPVAPEDLRGYAEMREKLAMPIAGGENEHTMYGYRELFAAGAVDIAQPDLGSCGGITAARHIIALAQSHGVAVNPHVWGSAIAQAASLQVIAALPVAHHSLFAQEPVFEYDRSSHPFRQLLITEPILQQDGWVAIPDGPGLGVEIDRAVLEKYRA 1143
            +KI DIRIHVLKSPLAEPFAFSQGWVRQRSATLVE++T+EGITGWGEAFAQGLEPPEIAAAAIEHALKPL++GA+ L TEVLWH+MYHATRDYGRKGSV+AAISAVDIALWDIAG+A G P+H LLGGAFR RV+PYATGFYRIKGQGE+ RLA+EA+RHHEAGF+ MKVKLGYGVDDDI  MQAI  AI+GR ITLMIDTNHAYGRAEAL+LGRAL    LRWYEEPV PEDL GY+EMR KL MPIAGGENEHT++GYR+LFAA AVDIAQPDL SCGGI+AARHI+ LAQ+H VAVNPHVWGSAIAQAASLQ+IAALPV HHSLFAQEPV E+D SSHPFRQ LIT+PI Q DGWV IPDGPGLGVE+DR+V+E+YR+
Sbjct:    1 MKIVDIRIHVLKSPLAEPFAFSQGWVRQRSATLVEVLTEEGITGWGEAFAQGLEPPEIAAAAIEHALKPLILGANALDTEVLWHKMYHATRDYGRKGSVIAAISAVDIALWDIAGKAHGVPIHVLLGGAFRMRVQPYATGFYRIKGQGESGRLADEAIRHHEAGFKIMKVKLGYGVDDDIKSMQAIRDAIDGRGITLMIDTNHAYGRAEALRLGRALDGYNLRWYEEPVVPEDLLGYSEMRAKLTMPIAGGENEHTLFGYRDLFAANAVDIAQPDLCSCGGISAARHIVTLAQAHSVAVNPHVWGSAIAQAASLQLIAALPVTHHSLFAQEPVLEFDCSSHPFRQHLITQPIQQHDGWVTIPDGPGLGVELDRSVIERYRS 381          
BLAST of mRNA_P-wetherbeei_contig13498.1.1 vs. uniprot
Match: A0A537KWX0_9PROT (Mandelate racemase/muconate lactonizing enzyme family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537KWX0_9PROT)

HSP 1 Score: 623 bits (1606), Expect = 4.250e-223
Identity = 303/381 (79.53%), Postives = 340/381 (89.24%), Query Frame = 1
Query:    1 LKIADIRIHVLKSPLAEPFAFSQGWVRQRSATLVEMITDEGITGWGEAFAQGLEPPEIAAAAIEHALKPLLIGADPLATEVLWHRMYHATRDYGRKGSVVAAISAVDIALWDIAGRARGEPVHKLLGGAFRNRVEPYATGFYRIKGQGEAARLAEEAVRHHEAGFRYMKVKLGYGVDDDIACMQAIGRAIEGRAITLMIDTNHAYGRAEALQLGRALADCKLRWYEEPVAPEDLRGYAEMREKLAMPIAGGENEHTMYGYRELFAAGAVDIAQPDLGSCGGITAARHIIALAQSHGVAVNPHVWGSAIAQAASLQVIAALPVAHHSLFAQEPVFEYDRSSHPFRQLLITEPILQQDGWVAIPDGPGLGVEIDRAVLEKYRA 1143
            +KI D+ IHVLKSPL+EPFAFSQGWVRQRSATLVE++TDEGI+GWGEAFAQGLEPPEIAA  I+ AL+PLLIGADPL TEVLWHRMYH TRDYGRKGSVVAAISAVDIALWDIAG+  G P++KLLGGAFR RV+PYATGFYRIKG+GE  RLAEEA+RH EAGF  MKVKLGYGV+DDIA M+ IGRAI+G+ I LM+DTNHAYGRAEAL+LGRAL +  LRWYEEPV PED+ GY EMR KL+MPIAGGENEHT++G+REL AAGAVDIAQPD+GSCGGITAARHI+ALAQSHGV VNPHVWGSAIAQAASL VIAA+PVAHHSL+ QEPV EYDRSSHPFR+ LI EPI   DGWV + D PGLG+E+DRA +++YRA
Sbjct:    1 MKITDLAIHVLKSPLSEPFAFSQGWVRQRSATLVEVLTDEGISGWGEAFAQGLEPPEIAATVIDKALRPLLIGADPLDTEVLWHRMYHMTRDYGRKGSVVAAISAVDIALWDIAGKFHGTPIYKLLGGAFRTRVQPYATGFYRIKGRGEGQRLAEEALRHFEAGFTLMKVKLGYGVEDDIASMREIGRAIQGKPIRLMVDTNHAYGRAEALRLGRALEEHDLRWYEEPVVPEDVAGYTEMRAKLSMPIAGGENEHTLFGFRELLAAGAVDIAQPDIGSCGGITAARHIMALAQSHGVQVNPHVWGSAIAQAASLHVIAAVPVAHHSLYPQEPVLEYDRSSHPFRRELIQEPIELVDGWVHVTDKPGLGIEVDRATIDRYRA 381          
BLAST of mRNA_P-wetherbeei_contig13498.1.1 vs. uniprot
Match: A0A7X6I8G0_9BURK (Mandelate racemase/muconate lactonizing enzyme family protein n=1 Tax=Ramlibacter lithotrophicus TaxID=2606681 RepID=A0A7X6I8G0_9BURK)

HSP 1 Score: 620 bits (1600), Expect = 3.360e-222
Identity = 297/381 (77.95%), Postives = 336/381 (88.19%), Query Frame = 1
Query:    1 LKIADIRIHVLKSPLAEPFAFSQGWVRQRSATLVEMITDEGITGWGEAFAQGLEPPEIAAAAIEHALKPLLIGADPLATEVLWHRMYHATRDYGRKGSVVAAISAVDIALWDIAGRARGEPVHKLLGGAFRNRVEPYATGFYRIKGQGEAARLAEEAVRHHEAGFRYMKVKLGYGVDDDIACMQAIGRAIEGRAITLMIDTNHAYGRAEALQLGRALADCKLRWYEEPVAPEDLRGYAEMREKLAMPIAGGENEHTMYGYRELFAAGAVDIAQPDLGSCGGITAARHIIALAQSHGVAVNPHVWGSAIAQAASLQVIAALPVAHHSLFAQEPVFEYDRSSHPFRQLLITEPILQQDGWVAIPDGPGLGVEIDRAVLEKYRA 1143
            +KIA +++HVLKSPLAEPFAFSQGWV QRSATLVE+ TD G++GWGEAFAQGLEPPEIAAA IEHALKPL++GADPL TEVLWHRMYH TRDYGRKGSVVA ISAVD+ALWDIAG+  G P++KLLGGAFR RV+PYATGFYRI+GQGEA RLAEEA+RH +AGF  MKVKLGYGVDDDIACM+ I  A++G+ + LM+DTNHAYGRAEAL+LGR LA   LRWYEEPV PED+ GYAE+R +L MPIAGGENEHT+YG+RE   AGAVD+AQPD+GSCGG++A RHIIALAQSHGV VNPHVWGSAIAQAASLQ IAA+PVAHHSLFAQEPV EYDRSSHPFRQ LIT PI Q DGWV IP GPGLGV++DR V+ ++ A
Sbjct:    1 MKIAQLKVHVLKSPLAEPFAFSQGWVTQRSATLVEVTTDTGLSGWGEAFAQGLEPPEIAAAVIEHALKPLVLGADPLDTEVLWHRMYHRTRDYGRKGSVVAGISAVDVALWDIAGKFHGVPIYKLLGGAFRTRVQPYATGFYRIEGQGEARRLAEEALRHFDAGFTLMKVKLGYGVDDDIACMREIAAALQGKPVRLMVDTNHAYGRAEALRLGRELAQYDLRWYEEPVVPEDVAGYAELRRQLTMPIAGGENEHTLYGFREFLGAGAVDVAQPDIGSCGGLSAGRHIIALAQSHGVQVNPHVWGSAIAQAASLQFIAAVPVAHHSLFAQEPVLEYDRSSHPFRQHLITRPIQQVDGWVEIPGGPGLGVDVDREVIREFSA 381          
BLAST of mRNA_P-wetherbeei_contig13498.1.1 vs. uniprot
Match: UPI0019CC4015 (Mandelate racemase/muconate lactonizing enzyme family protein n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=UPI0019CC4015)

HSP 1 Score: 606 bits (1563), Expect = 8.310e-217
Identity = 296/366 (80.87%), Postives = 324/366 (88.52%), Query Frame = 1
Query:    1 LKIADIRIHVLKSPLAEPFAFSQGWVRQRSATLVEMITDEGITGWGEAFAQGLEPPEIAAAAIEHALKPLLIGADPLATEVLWHRMYHATRDYGRKGSVVAAISAVDIALWDIAGRARGEPVHKLLGGAFRNRVEPYATGFYRIKGQGEAARLAEEAVRHHEAGFRYMKVKLGYGVDDDIACMQAIGRAIEGRAITLMIDTNHAYGRAEALQLGRALADCKLRWYEEPVAPEDLRGYAEMREKLAMPIAGGENEHTMYGYRELFAAGAVDIAQPDLGSCGGITAARHIIALAQSHGVAVNPHVWGSAIAQAASLQVIAALPVAHHSLFAQEPVFEYDRSSHPFRQLLITEPILQQDGWVAIPDGPG 1098
            +KI ++ IHVLKSPLAEPFAFSQGWV QRSATLVE++TDEGITGWGEAFAQGLEPPEIAAA I+ ALKPLLIGADPL  EVLWHRMYH TRDYGRKGSV++AISAVDIALWDIAG+    P++KLLGGAFR RV+PYATGFYRIKGQGEA RL EEAVRH EAGF  MKVKLGYGVDDDI CM+ IGRAI+G+A+TLM+DTNHAYGRAEAL+LGRAL +  LRWYEEPV PED++GY EMR+KL+MPIAGGENEHT+YG+RE   A AVDIAQPDLGSCGG++A RHI ALAQSHGV VNPHVWGSAIAQAASLQ IAA+PVAHHSLFAQEPV EYDRSSHPFRQ LIT PI    GWV IP GPG
Sbjct:    1 MKITNLNIHVLKSPLAEPFAFSQGWVTQRSATLVEIVTDEGITGWGEAFAQGLEPPEIAAAVIDKALKPLLIGADPLDIEVLWHRMYHMTRDYGRKGSVISAISAVDIALWDIAGKFHELPIYKLLGGAFRTRVQPYATGFYRIKGQGEAKRLGEEAVRHFEAGFSLMKVKLGYGVDDDIVCMKEIGRAIQGKAVTLMVDTNHAYGRAEALKLGRALEEYDLRWYEEPVVPEDVQGYVEMRQKLSMPIAGGENEHTLYGFREFLGANAVDIAQPDLGSCGGLSAGRHIAALAQSHGVQVNPHVWGSAIAQAASLQFIAAVPVAHHSLFAQEPVLEYDRSSHPFRQHLITTPIQHVGGWVDIPSGPG 366          
BLAST of mRNA_P-wetherbeei_contig13498.1.1 vs. uniprot
Match: A0A5C8NSR1_9BURK (Mandelate racemase/muconate lactonizing enzyme family protein n=2 Tax=Burkholderiaceae TaxID=119060 RepID=A0A5C8NSR1_9BURK)

HSP 1 Score: 590 bits (1522), Expect = 2.610e-210
Identity = 281/382 (73.56%), Postives = 334/382 (87.43%), Query Frame = 1
Query:    1 LKIADIRIHVLKSPLAEPFAFSQGWVRQRSATLVEMITDEGITGWGEAFAQGLEPPEIAAAAIEHALKPLLIGADPLATEVLWHRMYHATRDYGRKGSVVAAISAVDIALWDIAGRARGEPVHKLLGGAFRNRVEPYATGFYRIKGQGEAARLAEEAVRHHEAGFRYMKVKLGYGVDDDIACMQAIGRAIEGRAITLMIDTNHAYGRAEALQLGRALADCKLRWYEEPVAPEDLRGYAEMREKLAMPIAGGENEHTMYGYRELFAAGAVDIAQPDLGSCGGITAARHIIALAQSHGVAVNPHVWGSAIAQAASLQVIAALPVAHHSLFAQEPVFEYDRSSHPFRQLLITEPILQQDGWVAIPDGPGLGVEIDRAVLEKYRAR 1146
            ++I D+R+HVL+SPL  PFAFSQGWV +RSATLVE++TD G+TGWGEAFAQGLEPP+IAAA IEHAL+PL++GA+PL TEVLWHRMYH TRDYGRKGSV+AAISAVDIALWD+AG+  GEPVH+LLGGAFR+RV+PYATGFYR++GQGEA RLA+EA+ H EAGFR MKVKLGYGVDDDIA ++A+ RAIEGR +TLM DTNHAYGRAEAL+LG AL +  LRWYEEPVAPED+ GY E+R +L  PIAGGENEHT++G+REL    AVDIAQPD+GSCGG+TAARHI+ALAQ++G+ VNPHVWGSA+AQAASL +IAALPVAHHS+FA+ PV EYDRSSHPFR+ L+TEPI   DG V +P GPGLG+ +    LE++R R
Sbjct:    1 MRITDLRVHVLQSPLDPPFAFSQGWVGRRSATLVEVVTDGGLTGWGEAFAQGLEPPQIAAAVIEHALRPLVVGANPLDTEVLWHRMYHQTRDYGRKGSVIAAISAVDIALWDLAGKHYGEPVHRLLGGAFRDRVQPYATGFYRLRGQGEAPRLADEALAHFEAGFRLMKVKLGYGVDDDIAVIRAVARAIEGRGVTLMADTNHAYGRAEALRLGYALDELDLRWYEEPVAPEDIDGYCELRARLRTPIAGGENEHTLHGFRELLGRHAVDIAQPDVGSCGGLTAARHIVALAQANGIEVNPHVWGSAVAQAASLHLIAALPVAHHSVFARPPVLEYDRSSHPFRRELVTEPIEMADGAVPVPQGPGLGIALRVETLERFRIR 382          
BLAST of mRNA_P-wetherbeei_contig13498.1.1 vs. uniprot
Match: A0A0S8CVQ9_9PROT (Mandelate racemase n=1 Tax=Betaproteobacteria bacterium SG8_40 TaxID=1703389 RepID=A0A0S8CVQ9_9PROT)

HSP 1 Score: 564 bits (1453), Expect = 8.300e-200
Identity = 271/380 (71.32%), Postives = 318/380 (83.68%), Query Frame = 1
Query:    1 LKIADIRIHVLKSPLAEPFAFSQGWVRQRSATLVEMITDEGITGWGEAFAQGLEPPEIAAAAIEHALKPLLIGADPLATEVLWHRMYHATRDYGRKGSVVAAISAVDIALWDIAGRARGEPVHKLLGGAFRNRVEPYATGFYRIKGQGEAARLAEEAVRHHEAGFRYMKVKLGYGVDDDIACMQAIGRAIEGRAITLMIDTNHAYGRAEALQLGRALADCKLRWYEEPVAPEDLRGYAEMREKLAMPIAGGENEHTMYGYRELFAAGAVDIAQPDLGSCGGITAARHIIALAQSHGVAVNPHVWGSAIAQAASLQVIAALPVAHHSLFAQEPVFEYDRSSHPFRQLLITEPILQQDGWVAIPDGPGLGVEIDRAVLEKYR 1140
            +KI  IR HVLKSPLA+PFAFSQGWV  RSATLVE+ TD G  GWGEAFAQG+E PEI+AA IEHAL PLL GA+PL  EVLWHRMYH TRDYGRKGSVVAAISA+DIALWDIAG+  G PV +LLGGAFR  V+PYATGFYRI+GQGEA RLA+EA++H++AGFR MK+KLG+GVDDDIA M+AIGRA+EG+ +TLM+D+NHAYGR EAL+LG  L +  LRWYEEPV PED+ GY E+R KL  PIAGGENEHT+YG+ EL   GAVDIAQPD+GSCGG++A RHI  L Q+ G+ +NPHVWGSA+AQAASLQV+AALPV HHSLFA+ P+ EYDRSSHPFR+ L+TEP+  +DG V I  GPGLG+E+    LE+YR
Sbjct:    1 MKITGIRTHVLKSPLAQPFAFSQGWVPTRSATLVEITTDSGPVGWGEAFAQGMEAPEISAAVIEHALAPLLSGANPLDIEVLWHRMYHRTRDYGRKGSVVAAISAIDIALWDIAGKHYGVPVSRLLGGAFRETVQPYATGFYRIEGQGEAPRLADEALQHYDAGFRAMKIKLGFGVDDDIAVMRAIGRAVEGKGVTLMVDSNHAYGRTEALRLGYVLDEYDLRWYEEPVVPEDIDGYVELRSKLRTPIAGGENEHTLYGFGELMRRGAVDIAQPDIGSCGGVSALRHIAVLGQAQGIEINPHVWGSAVAQAASLQVLAALPVTHHSLFARGPILEYDRSSHPFRRELVTEPMSLEDGVVRISQGPGLGIELVPEALERYR 380          
BLAST of mRNA_P-wetherbeei_contig13498.1.1 vs. uniprot
Match: A0A2Z2NPQ6_9GAMM (D-galactarolactone cycloisomerase n=1 Tax=Granulosicoccus antarcticus IMCC3135 TaxID=1192854 RepID=A0A2Z2NPQ6_9GAMM)

HSP 1 Score: 538 bits (1385), Expect = 1.840e-189
Identity = 256/381 (67.19%), Postives = 313/381 (82.15%), Query Frame = 1
Query:    1 LKIADIRIHVLKSPLAEPFAFSQGWVRQRSATLVEMITDEGITGWGEAFAQGLEPPEIAAAAIEHALKPLLIGADPLATEVLWHRMYHATRDYGRKGSVVAAISAVDIALWDIAGRARGEPVHKLLGGAFRNRVEPYATGFYRIKGQGEAARLAEEAVRHHEAGFRYMKVKLGYGVDDDIACMQAIGRAIEGRAITLMIDTNHAYGRAEALQLGRALADCKLRWYEEPVAPEDLRGYAEMREKLAMPIAGGENEHTMYGYRELFAAGAVDIAQPDLGSCGGITAARHIIALAQSHGVAVNPHVWGSAIAQAASLQVIAALPVAHHSLFAQEPVFEYDRSSHPFRQLLITEPILQQDGWVAIPDGPGLGVEIDRAVLEKYRA 1143
            +KI+ I I VLK+PLAEPFAFSQGWV QR+ATLV + TD G+TGWGEAFAQGLEPPEI+AA IEHALKPL++G +PL T VLWH+MY+ TRD+GRKGSV A ISA+DIALWDIAG+   +P+H+LLGGAFR+ V PYATGFYRI GQ EA RLA EA  HH AGF+ MK+KLG+GV DDI  M+AI  A+    I LM+DTNHAYGR++AL LG+ L    +RWYEEPV PED+ GY E+R +L++PIAGGENEHT YG+R L  + A+D+AQPD+GSCGG TA R I ALAQ+HGV VNPHVWGSAIAQAAS+Q+IA LP+ +HSLF +EP+ EYDRS+HPFRQ L+++P+  +DG VAIPDGPGLG+E++   +EKYR+
Sbjct:    1 MKISSIEIFVLKTPLAEPFAFSQGWVHQRAATLVRITTDNGLTGWGEAFAQGLEPPEISAAVIEHALKPLVLGENPLDTNVLWHKMYNQTRDFGRKGSVTAGISAIDIALWDIAGQYYSQPIHQLLGGAFRSHVVPYATGFYRISGQKEAERLAAEAKDHHAAGFKAMKIKLGFGVADDIEVMEAIHEAVGHLDIDLMVDTNHAYGRSDALILGKTLEKYDVRWYEEPVVPEDIEGYRELRTRLSIPIAGGENEHTAYGFRALIGSQAIDVAQPDIGSCGGFTAVRDITALAQAHGVLVNPHVWGSAIAQAASIQLIATLPITNHSLFPREPILEYDRSAHPFRQQLVSQPLGIRDGVVAIPDGPGLGIEVNMDTVEKYRS 381          
BLAST of mRNA_P-wetherbeei_contig13498.1.1 vs. uniprot
Match: A0A2D9SFS2_9PROT (Mandelate racemase n=1 Tax=SAR116 cluster bacterium TaxID=2024888 RepID=A0A2D9SFS2_9PROT)

HSP 1 Score: 528 bits (1359), Expect = 1.780e-185
Identity = 242/380 (63.68%), Postives = 316/380 (83.16%), Query Frame = 1
Query:    1 LKIADIRIHVLKSPLAEPFAFSQGWVRQRSATLVEMITDEGITGWGEAFAQGLEPPEIAAAAIEHALKPLLIGADPLATEVLWHRMYHATRDYGRKGSVVAAISAVDIALWDIAGRARGEPVHKLLGGAFRNRVEPYATGFYRIKGQGEAARLAEEAVRHHEAGFRYMKVKLGYGVDDDIACMQAIGRAIEGRAITLMIDTNHAYGRAEALQLGRALADCKLRWYEEPVAPEDLRGYAEMREKLAMPIAGGENEHTMYGYRELFAAGAVDIAQPDLGSCGGITAARHIIALAQSHGVAVNPHVWGSAIAQAASLQVIAALPVAHHSLFAQEPVFEYDRSSHPFRQLLITEPILQQDGWVAIPDGPGLGVEIDRAVLEKYR 1140
            +K+  I +HV+K  L  PFAFSQGWV++RSATLVE+ T+EGITGWGEAF QGLEPPEI+AA IE++L  L+I  +PL  E+LWH+MY+ TRD+GRKGSVVAAISA+DIALWDI+G+   +P+++LLGG+FR +++PYATGFYR+ GQGE +RLAEEA++H+E GF +MKVKLG+G+DDD+ CM+ I + +E +  TLMIDTNHAYG  EALQLG AL D  LRWYEEPV PED++GYAE++ KL +PIAGGENEHT+YG+R LF    ++I QPD+GSCGGITA +HI  LAQS G+ VNPHVWGSA+AQ+ASL V+A+LP+AHHSLF +EP+ EYD+SSHPFR+ L+ EPI  ++G+V + D PGLG+E++  +++KY+
Sbjct:    3 IKVTKIAVHVIKCDLDIPFAFSQGWVKKRSATLVEIKTNEGITGWGEAFCQGLEPPEISAAVIENSLSELIIDKNPLDIELLWHKMYNQTRDFGRKGSVVAAISAIDIALWDISGKYYEKPIYQLLGGSFRKKIKPYATGFYRLNGQGEVSRLAEEAIQHYENGFDHMKVKLGFGIDDDVKCMEGIRKILENKKTTLMIDTNHAYGLTEALQLGEALKDYNLRWYEEPVIPEDIKGYAELKSKLRIPIAGGENEHTLYGFRNLFENNCLNIVQPDIGSCGGITATKHISVLAQSFGIEVNPHVWGSAVAQSASLHVLASLPIAHHSLFPREPILEYDQSSHPFRKELLKEPIYLENGYVNVSDKPGLGIEVNFEIVKKYK 382          
BLAST of mRNA_P-wetherbeei_contig13498.1.1 vs. uniprot
Match: A0A349YF21_9PROT (Mandelate racemase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A349YF21_9PROT)

HSP 1 Score: 527 bits (1357), Expect = 3.460e-185
Identity = 249/381 (65.35%), Postives = 315/381 (82.68%), Query Frame = 1
Query:    1 LKIADIRIHVLKSPLAEPFAFSQGWVRQRSATLVEMITDEGITGWGEAFAQGLEPPEIAAAAIEHALKPLLIGADPLATEVLWHRMYHATRDYGRKGSVVAAISAVDIALWDIAGRARGEPVHKLLGGAFRNRVEPYATGFYRIKGQGEAARLAEEAVRHHEAGFRYMKVKLGYGVDDDIACMQAIGRAIEGRAITLMIDTNHAYGRAEALQLGRALADCKLRWYEEPVAPEDLRGYAEMREKLAMPIAGGENEHTMYGYRELFAAGAVDIAQPDLGSCGGITAARHIIALAQSHGVAVNPHVWGSAIAQAASLQVIAALPVAHHSLFAQEPVFEYDRSSHPFRQLLITEPI-LQQDGWVAIPDGPGLGVEIDRAVLEKYR 1140
            +KI DIR+H+L+S L +PFAFSQGWV+ RSAT+VE+ TD G+ GWGEAFAQGLE P+IAA+AIE++LKPL++G DP   EVLWH MY+ TRD+GRKGS++AAIS +DIALWD+ G+A   PV +L+GG FR+ V+PYATGFYR+KGQ EA RLAEEAV H++AGF+ MK+KLG+GV+DDI  MQ IGRAIEGR + LM+DTNHAYGR EAL+LGR L +  LRWYEEPV  ED+ GY E+R+KL +PIAGGENEH++YG+REL    AVDI QPD+GSCGG+T ARH+ ALAQ++G+ VNPHVWGS +AQAASLQV+AALP A HSL+A++P+ EYDRSSHPFR  L+  P+ L  +G V I + PGLG+E+++ V+ KY+
Sbjct:    1 MKITDIRVHILQSELEQPFAFSQGWVKARSATIVEIHTDHGLIGWGEAFAQGLESPQIAASAIEYSLKPLILGQDPRNIEVLWHSMYNHTRDFGRKGSIIAAISGIDIALWDLLGKAYEAPVSQLMGGRFRDVVQPYATGFYRLKGQNEADRLAEEAVAHNDAGFKAMKIKLGFGVNDDIKVMQQIGRAIEGRTVELMVDTNHAYGRTEALRLGRVLDEYDLRWYEEPVPAEDVGGYIELRQKLKIPIAGGENEHSIYGFRELLNCHAVDIVQPDIGSCGGVTGARHVAALAQANGIEVNPHVWGSGVAQAASLQVLAALPTAVHSLYARQPILEYDRSSHPFRDDLVDRPLSLNTNGMVEISEKPGLGIEVNQEVVNKYK 381          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13498.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4P5U987_9BURK5.160e-23383.20D-galactarolactone cycloisomerase n=1 Tax=Comamona... [more]
A0A315DSK1_9BURK4.390e-23282.68Mandelate racemase n=1 Tax=Limnohabitans sp. 2KL-5... [more]
A0A537KWX0_9PROT4.250e-22379.53Mandelate racemase/muconate lactonizing enzyme fam... [more]
A0A7X6I8G0_9BURK3.360e-22277.95Mandelate racemase/muconate lactonizing enzyme fam... [more]
UPI0019CC40158.310e-21780.87Mandelate racemase/muconate lactonizing enzyme fam... [more]
A0A5C8NSR1_9BURK2.610e-21073.56Mandelate racemase/muconate lactonizing enzyme fam... [more]
A0A0S8CVQ9_9PROT8.300e-20071.32Mandelate racemase n=1 Tax=Betaproteobacteria bact... [more]
A0A2Z2NPQ6_9GAMM1.840e-18967.19D-galactarolactone cycloisomerase n=1 Tax=Granulos... [more]
A0A2D9SFS2_9PROT1.780e-18563.68Mandelate racemase n=1 Tax=SAR116 cluster bacteriu... [more]
A0A349YF21_9PROT3.460e-18565.35Mandelate racemase n=1 Tax=Betaproteobacteria bact... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13498contigP-wetherbeei_contig13498:84..1232 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog909943.HIMB100_00004040
Preferred namegci
PFAMsMR_MLE_C,MR_MLE_N
Model size1149
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC03287
KEGG koko:K18983
KEGG ReactionR10847
KEGG Pathwayko00053,map00053
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.79e-177
EggNOG OGsCOG4948@1|root,COG4948@2|Bacteria,1MW5B@1224|Proteobacteria,2UNXP@28211|Alphaproteobacteria,4BRGR@82117|unclassified Alphaproteobacteria
EC5.5.1.27
DescriptionPFAM Mandelate racemase muconate lactonizing enzyme, C-terminal domain
Cds size1149
COG categoryM
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185987.6283655-CDS-P-wetherbeei_contig13498:83..12321683185987.6283655-CDS-P-wetherbeei_contig13498:83..1232Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13498 84..1232 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13498.1.1prot_P-wetherbeei_contig13498.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13498 84..1232 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13498.1.1

>prot_P-wetherbeei_contig13498.1.1 ID=prot_P-wetherbeei_contig13498.1.1|Name=mRNA_P-wetherbeei_contig13498.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=383bp
LKIADIRIHVLKSPLAEPFAFSQGWVRQRSATLVEMITDEGITGWGEAFA
QGLEPPEIAAAAIEHALKPLLIGADPLATEVLWHRMYHATRDYGRKGSVV
AAISAVDIALWDIAGRARGEPVHKLLGGAFRNRVEPYATGFYRIKGQGEA
ARLAEEAVRHHEAGFRYMKVKLGYGVDDDIACMQAIGRAIEGRAITLMID
TNHAYGRAEALQLGRALADCKLRWYEEPVAPEDLRGYAEMREKLAMPIAG
GENEHTMYGYRELFAAGAVDIAQPDLGSCGGITAARHIIALAQSHGVAVN
PHVWGSAIAQAASLQVIAALPVAHHSLFAQEPVFEYDRSSHPFRQLLITE
PILQQDGWVAIPDGPGLGVEIDRAVLEKYRAR*
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mRNA from alignment at P-wetherbeei_contig13498:84..1232+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13498.1.1 ID=mRNA_P-wetherbeei_contig13498.1.1|Name=mRNA_P-wetherbeei_contig13498.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1149bp|location=Sequence derived from alignment at P-wetherbeei_contig13498:84..1232+ (Phaeothamnion wetherbeei SAG_119_79)
TTGAAGATTGCCGATATCAGGATCCATGTTCTCAAGAGCCCGCTCGCCGA GCCTTTCGCGTTTTCGCAGGGCTGGGTGCGGCAGCGCAGCGCCACCCTGG TCGAAATGATCACCGACGAGGGAATCACCGGCTGGGGCGAAGCCTTCGCG CAGGGCCTGGAGCCGCCGGAAATCGCCGCCGCGGCGATCGAGCACGCGTT GAAGCCGCTCCTGATCGGCGCCGATCCTCTGGCTACCGAGGTACTGTGGC ACCGCATGTATCACGCGACCCGCGATTACGGCCGCAAGGGTTCGGTGGTG GCCGCCATCAGCGCGGTTGACATCGCCTTGTGGGACATTGCCGGCCGCGC ACGCGGCGAGCCCGTCCACAAGCTGCTGGGTGGCGCCTTCCGCAACCGGG TGGAGCCCTATGCCACCGGCTTCTATCGCATCAAGGGCCAGGGCGAGGCC GCGCGCCTGGCCGAGGAGGCGGTGCGCCATCACGAGGCAGGCTTCCGCTA CATGAAGGTCAAGCTGGGGTATGGGGTGGATGACGATATCGCCTGCATGC AGGCCATTGGCCGTGCCATCGAAGGGCGCGCCATCACGCTGATGATCGAT ACCAACCACGCCTACGGGCGTGCCGAGGCCCTGCAACTGGGCCGCGCGCT GGCCGATTGCAAGTTGCGCTGGTACGAGGAACCGGTGGCCCCGGAAGACC TGCGCGGCTACGCCGAGATGCGCGAGAAGCTTGCGATGCCGATTGCCGGC GGCGAGAACGAGCACACCATGTATGGCTATCGCGAGCTGTTCGCTGCAGG GGCGGTCGACATCGCCCAGCCGGACCTCGGTTCCTGTGGCGGCATCACGG CGGCCCGCCACATCATCGCGCTGGCGCAGTCGCATGGCGTGGCCGTCAAT CCGCATGTGTGGGGGTCGGCAATCGCGCAGGCTGCCTCCCTGCAGGTGAT CGCGGCGCTGCCGGTGGCGCACCATTCGCTGTTCGCGCAGGAACCGGTGT TCGAATACGACCGCTCCTCGCATCCGTTCCGCCAGCTCCTGATCACCGAG CCGATCCTGCAACAGGATGGCTGGGTGGCGATTCCCGACGGGCCGGGGCT GGGGGTGGAGATAGACCGCGCCGTGCTGGAGAAGTACCGCGCGCGCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13498:84..1232+

>mRNA_P-wetherbeei_contig13498.1.1 ID=mRNA_P-wetherbeei_contig13498.1.1|Name=mRNA_P-wetherbeei_contig13498.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1149bp|location=Sequence derived from alignment at P-wetherbeei_contig13498:84..1232+ (Phaeothamnion wetherbeei SAG_119_79)
TTGAAGATTGCCGATATCAGGATCCATGTTCTCAAGAGCCCGCTCGCCGA
GCCTTTCGCGTTTTCGCAGGGCTGGGTGCGGCAGCGCAGCGCCACCCTGG
TCGAAATGATCACCGACGAGGGAATCACCGGCTGGGGCGAAGCCTTCGCG
CAGGGCCTGGAGCCGCCGGAAATCGCCGCCGCGGCGATCGAGCACGCGTT
GAAGCCGCTCCTGATCGGCGCCGATCCTCTGGCTACCGAGGTACTGTGGC
ACCGCATGTATCACGCGACCCGCGATTACGGCCGCAAGGGTTCGGTGGTG
GCCGCCATCAGCGCGGTTGACATCGCCTTGTGGGACATTGCCGGCCGCGC
ACGCGGCGAGCCCGTCCACAAGCTGCTGGGTGGCGCCTTCCGCAACCGGG
TGGAGCCCTATGCCACCGGCTTCTATCGCATCAAGGGCCAGGGCGAGGCC
GCGCGCCTGGCCGAGGAGGCGGTGCGCCATCACGAGGCAGGCTTCCGCTA
CATGAAGGTCAAGCTGGGGTATGGGGTGGATGACGATATCGCCTGCATGC
AGGCCATTGGCCGTGCCATCGAAGGGCGCGCCATCACGCTGATGATCGAT
ACCAACCACGCCTACGGGCGTGCCGAGGCCCTGCAACTGGGCCGCGCGCT
GGCCGATTGCAAGTTGCGCTGGTACGAGGAACCGGTGGCCCCGGAAGACC
TGCGCGGCTACGCCGAGATGCGCGAGAAGCTTGCGATGCCGATTGCCGGC
GGCGAGAACGAGCACACCATGTATGGCTATCGCGAGCTGTTCGCTGCAGG
GGCGGTCGACATCGCCCAGCCGGACCTCGGTTCCTGTGGCGGCATCACGG
CGGCCCGCCACATCATCGCGCTGGCGCAGTCGCATGGCGTGGCCGTCAAT
CCGCATGTGTGGGGGTCGGCAATCGCGCAGGCTGCCTCCCTGCAGGTGAT
CGCGGCGCTGCCGGTGGCGCACCATTCGCTGTTCGCGCAGGAACCGGTGT
TCGAATACGACCGCTCCTCGCATCCGTTCCGCCAGCTCCTGATCACCGAG
CCGATCCTGCAACAGGATGGCTGGGTGGCGATTCCCGACGGGCCGGGGCT
GGGGGTGGAGATAGACCGCGCCGTGCTGGAGAAGTACCGCGCGCGCTGA
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