mRNA_P-wetherbeei_contig1349.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1349.6.1 vs. uniprot
Match: D8LCV2_ECTSI (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCV2_ECTSI) HSP 1 Score: 183 bits (464), Expect = 3.390e-53 Identity = 97/156 (62.18%), Postives = 114/156 (73.08%), Query Frame = 1
Query: 1 GMLVNAVLAAVPLLPAAWLALQLNDSALARPLLASLVLAILGYWGTLALVPRFKQFLSRRGLVGKDLCKMGLPGADDPIAEATGVIPGTIFLICIIILQLFYG-DSMEKMIDYHSGLLSICFMTFLGFTDDVLDLPWRYKLLLPTIATLPLLCAYD 465
G + +L A +LP+ L Q+ D + L AS LA LGY T+ ++P F FL+R GL GKDLCK G A+ I E TGVI GT+FLIC++ILQLFYG DS +KM+DY S LLSICFMTFLGFTDDVLDLPWRYKLLLPT+ATLPLLCAYD
Sbjct: 5 GRVPGQLLVAASILPSLALFGQIEDRSARGQLQASAALATLGYVATIYVLPTFTPFLARSGLTGKDLCKKGTASAEKEIPEGTGVIAGTMFLICVVILQLFYGRDSSDKMVDYLSALLSICFMTFLGFTDDVLDLPWRYKLLLPTVATLPLLCAYD 160
BLAST of mRNA_P-wetherbeei_contig1349.6.1 vs. uniprot
Match: A0A835ZAX3_9STRA (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAX3_9STRA) HSP 1 Score: 174 bits (442), Expect = 1.350e-49 Identity = 93/159 (58.49%), Postives = 116/159 (72.96%), Query Frame = 1
Query: 22 LAAVPLLPAAWLALQ------LNDSALARPLLASLVLAILGYWGTLALVPRFKQFLSRRGLVGKDLCKMGLPGADDPIAEATGVIPGTIFLICIIILQLFYGDSME------KMIDYHSGLLSICFMTFLGFTDDVLDLPWRYKLLLPTIATLPLLCAY 462
LA +PL+PA W+A ++ S+L + L+ASL LA+LG+ GT+AL+PRF +L++RGLVGKDLCK G+ G D I EA GVIPGT+FL+CII LQL + +M+D+HS LLS+CFM LGF DDVLDLPWR KL LPTIATLPLLCAY
Sbjct: 30 LAVLPLVPAIWVAWPHLVHDPVSRSSLFQQLVASLCLAVLGFVGTVALIPRFVPYLAKRGLVGKDLCKKGMAGGDVIIPEAAGVIPGTVFLVCIIFLQLTFRRLTSFCWFPMQMVDFHSALLSVCFMVLLGFADDVLDLPWRTKLFLPTIATLPLLCAY 188
BLAST of mRNA_P-wetherbeei_contig1349.6.1 vs. uniprot
Match: A0A7S2KQY4_9STRA (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KQY4_9STRA) HSP 1 Score: 144 bits (363), Expect = 2.280e-38 Identity = 70/118 (59.32%), Postives = 88/118 (74.58%), Query Frame = 1
Query: 115 AILGYWGTLALVPRFKQFLSRRGLVGKDLCKMGLPGADDPIAEATGVIPGTIFLICIII-LQLFYGDSMEKMIDYHSGLLSICFMTFLGFTDDVLDLPWRYKLLLPTIATLPLLCAYD 465
AI GY T L+P KQ+L ++G+ GKDL K G AD I EA G++PGTIFLIC+I+ L F + +K++D +S LLSICFM FLGFTDDVLD PWRYKL+LP++ATLPLLC Y+
Sbjct: 45 AIAGYMSTSTLIPNIKQYLLKQGICGKDLGKRGTSVADKDIPEALGIVPGTIFLICLILCLVKFANEHHDKLLDCNSALLSICFMLFLGFTDDVLDWPWRYKLMLPSVATLPLLCCYE 162
BLAST of mRNA_P-wetherbeei_contig1349.6.1 vs. uniprot
Match: A0A7S2U905_9STRA (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U905_9STRA) HSP 1 Score: 140 bits (352), Expect = 2.070e-37 Identity = 70/125 (56.00%), Postives = 91/125 (72.80%), Query Frame = 1
Query: 94 LLASLVLAILGYWGTLALVPRFKQFLSRRGLVGKDLCKMGLPGADDPIAEATGVIPGTIFLICIIILQLFYGDSM-EKMIDYHSGLLSICFMTFLGFTDDVLDLPWRYKLLLPTIATLPLLCAYD 465
LLA +++A+LGY GT LVP+ K + RRG+ GKDL K G AD + EA G++PG +FLIC+ + Y + K++D +S LLSICFM FLGF+DDVL+ PWRYKLLLPT+A+LPLLC YD
Sbjct: 58 LLAYVLVAMLGYVGTRKLVPKIKVYTLRRGISGKDLGKRGTSLADKDVPEALGIVPGAVFLICLTFCLVGYATTNPSKLLDCNSALLSICFMLFLGFSDDVLEWPWRYKLLLPTVASLPLLCCYD 182
BLAST of mRNA_P-wetherbeei_contig1349.6.1 vs. uniprot
Match: B8BWM8_THAPS (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWM8_THAPS) HSP 1 Score: 139 bits (349), Expect = 6.250e-37 Identity = 68/125 (54.40%), Postives = 89/125 (71.20%), Query Frame = 1
Query: 94 LLASLVLAILGYWGTLALVPRFKQFLSRRGLVGKDLCKMGLPGADDPIAEATGVIPGTIFLICIIILQL-FYGDSMEKMIDYHSGLLSICFMTFLGFTDDVLDLPWRYKLLLPTIATLPLLCAYD 465
LL + L ILGY GT L+P K ++ +RG+ GKDL K G P ++ I EA G++PG IFLIC+I + F + K++D +S LLSICFM FLGFTDDVL+ PWRYKL LP++A+LPLLC Y+
Sbjct: 1 LLLFMALGILGYVGTNRLIPSIKYYMLKRGISGKDLGKKGTPSENEDIPEALGIVPGAIFLICLIFCLIGFATNHPSKLLDLNSALLSICFMLFLGFTDDVLEWPWRYKLFLPSVASLPLLCCYE 125
BLAST of mRNA_P-wetherbeei_contig1349.6.1 vs. uniprot
Match: A0A7S0FMV2_9STRA (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FMV2_9STRA) HSP 1 Score: 140 bits (352), Expect = 1.540e-36 Identity = 76/147 (51.70%), Postives = 100/147 (68.03%), Query Frame = 1
Query: 52 WLALQLNDSAL----ARP----LLASLVLAILGYWGTLALVPRFKQFLSRRGLVGKDLCKMGLPGADDPIAEATGVIPGTIFLICIIILQLFYGDSME-KMIDYHSGLLSICFMTFLGFTDDVLDLPWRYKLLLPTIATLPLLCAYD 465
W+ + L SA+ A P LLA +++A LGY T +LVP+ K + R+G+ GKDL K G AD + EA G++PG IFLIC+I+ + Y S K++D +S LLSICFM FLGFTDDVLD PWRYKL LP++A+LPLLC Y+
Sbjct: 60 WVGISLERSAIEEVDAPPVGSQLLAYVIVASLGYLATSSLVPKIKVYTLRKGICGKDLGKRGSSIADKDVPEALGIVPGAIFLICLILCLVGYATSHPTKLLDCNSALLSICFMLFLGFTDDVLDWPWRYKLFLPSVASLPLLCCYN 206
BLAST of mRNA_P-wetherbeei_contig1349.6.1 vs. uniprot
Match: A0A7S1Y9I8_9STRA (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y9I8_9STRA) HSP 1 Score: 139 bits (349), Expect = 3.230e-36 Identity = 70/147 (47.62%), Postives = 96/147 (65.31%), Query Frame = 1
Query: 52 WLALQLNDS--------ALARPLLASLVLAILGYWGTLALVPRFKQFLSRRGLVGKDLCKMGLPGADDPIAEATGVIPGTIFLICIIILQLFYGDSM-EKMIDYHSGLLSICFMTFLGFTDDVLDLPWRYKLLLPTIATLPLLCAYD 465
W+ LN S ++A LLA + ++G+W T L+P K + R+G+ GKDL K G D+ + EA G++PG IFL+C+I + Y S+ K++D +S +LSICFM FLGFTDDVLD PWRYKL LPT+A+LPLLC Y+
Sbjct: 35 WVETVLNKSRDYTTDPPSVASQLLAYTFMGVVGFWATNRLIPHIKTYTLRKGISGKDLGKRGTKLEDNDVPEALGIVPGAIFLVCLIFCLVGYDFSLPSKLLDVNSAILSICFMLFLGFTDDVLDWPWRYKLFLPTVASLPLLCCYN 181
BLAST of mRNA_P-wetherbeei_contig1349.6.1 vs. uniprot
Match: A0A7S4NEZ8_9STRA (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NEZ8_9STRA) HSP 1 Score: 135 bits (340), Expect = 2.910e-35 Identity = 68/125 (54.40%), Postives = 89/125 (71.20%), Query Frame = 1
Query: 94 LLASLVLAILGYWGTLALVPRFKQFLSRRGLVGKDLCKMGLPGADDPIAEATGVIPGTIFLICIIILQLFYGDSME-KMIDYHSGLLSICFMTFLGFTDDVLDLPWRYKLLLPTIATLPLLCAYD 465
LLA L ++++GY T LVP+ K + RRG+ GKDL K G D I EA G++PG +FL+C+I + Y +S K++D +S LLSICFM FLGFTDDVLD PWRYKL LP++A+LPLLC Y+
Sbjct: 15 LLAYLFVSVMGYALTSHLVPKIKAYTLRRGICGKDLGKKGTSIEDREIPEALGIVPGAVFLVCLIFCLVGYANSHPAKLLDCNSALLSICFMLFLGFTDDVLDWPWRYKLFLPSVASLPLLCCYE 139
BLAST of mRNA_P-wetherbeei_contig1349.6.1 vs. uniprot
Match: A0A0G4ENJ0_VITBC (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ENJ0_VITBC) HSP 1 Score: 134 bits (337), Expect = 6.370e-35 Identity = 64/117 (54.70%), Postives = 85/117 (72.65%), Query Frame = 1
Query: 112 LAILGYWGTLALVPRFKQFLSRRGLVGKDLCKMGLPGADDPIAEATGVIPGTIFLICIIILQLFYGDSMEKMIDYHSGLLSICFMTFLGFTDDVLDLPWRYKLLLPTIATLPLLCAY 462
L+++G+ T L+P F + L RGL GKDL K PG D P+ EA G+IPGT+FL+C+I+ Q + K+++Y++GLLSICFM LGF DDV+DL WRYKL+LPT A+LPLL AY
Sbjct: 36 LSVVGFILTYNLIPPFAEKLKARGLFGKDLNK---PGKDVPVPEALGIIPGTVFLVCVILSQFMFSSDAVKLLEYNAGLLSICFMILLGFVDDVIDLAWRYKLMLPTFASLPLLIAY 149
BLAST of mRNA_P-wetherbeei_contig1349.6.1 vs. uniprot
Match: A0A448ZTD2_9STRA (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZTD2_9STRA) HSP 1 Score: 135 bits (340), Expect = 6.710e-35 Identity = 70/125 (56.00%), Postives = 87/125 (69.60%), Query Frame = 1
Query: 94 LLASLVLAILGYWGTLALVPRFKQFLSRRGLVGKDLCKMGLPGADDPIAEATGVIPGTIFLICIIILQLFYGDSM-EKMIDYHSGLLSICFMTFLGFTDDVLDLPWRYKLLLPTIATLPLLCAYD 465
LLA L++ + GY T LV K + R G+ GKDL K G AD P+ EA G++PG IFLIC+I + Y S K++D +S LLSICFM FLGFTDDVLD PWRYKL+LPT+A+LPLLC Y+
Sbjct: 55 LLAYLIMGVSGYVLTNKLVLNIKDYTLRXGIFGKDLGKRGTDLADVPVPEALGIVPGAIFLICLIFCLVGYATSHPSKLLDLNSALLSICFMLFLGFTDDVLDWPWRYKLVLPTVASLPLLCCYN 179 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1349.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1349.6.1 >prot_P-wetherbeei_contig1349.6.1 ID=prot_P-wetherbeei_contig1349.6.1|Name=mRNA_P-wetherbeei_contig1349.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=154bp MLVNAVLAAVPLLPAAWLALQLNDSALARPLLASLVLAILGYWGTLALVPback to top mRNA from alignment at P-wetherbeei_contig1349:6632..7338+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1349.6.1 ID=mRNA_P-wetherbeei_contig1349.6.1|Name=mRNA_P-wetherbeei_contig1349.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=707bp|location=Sequence derived from alignment at P-wetherbeei_contig1349:6632..7338+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1349:6632..7338+ >mRNA_P-wetherbeei_contig1349.6.1 ID=mRNA_P-wetherbeei_contig1349.6.1|Name=mRNA_P-wetherbeei_contig1349.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=462bp|location=Sequence derived from alignment at P-wetherbeei_contig1349:6632..7338+ (Phaeothamnion wetherbeei SAG_119_79)back to top |