mRNA_P-wetherbeei_contig1349.4.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1349.4.2 vs. uniprot
Match: D8LSU5_ECTSI (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSU5_ECTSI) HSP 1 Score: 211 bits (536), Expect = 1.300e-65 Identity = 121/222 (54.50%), Postives = 148/222 (66.67%), Query Frame = 1
Query: 4 DPELKAKVKGLLMQMAATSNRGQLATAEEKSVALDLVFQVGDGND--DASSFLLCGFPRGTWELVLSDTQLFRSSPFFMALGELFGEDRERAETVFALHRAATSNGEIGRVRQIISESELVSELDLSVGILAGIPFAMKGTVVTKAAIAPSSSETFSVMVQTSTVTNSNLLPFMDNAVELPVESLYSSLRGSVPEVKLSTYYLDDNMRISRTPDDHFFVYVR 663
+PEL+ +K ++ +AATSNRGQ+AT EEK A+DL+FQ+ N DA++ G G WELV +DTQ FR SPFFMALGE+FGE + +AET+F+LHRAATSNGEIGRVRQ ISES LVSE+DL VG+L G+P A+KGTVVTKA + P S+LRGSVPE KLSTYYLD++MRISR DDH FV+VR
Sbjct: 30 NPELRETMKREVLSIAATSNRGQVATQEEKDAAMDLIFQLESLNPTPDATNVNTIG---GAWELVYTDTQPFRCSPFFMALGEVFGEKKGQAETLFSLHRAATSNGEIGRVRQTISESMLVSEIDLKVGLLPGLPMALKGTVVTKARLNP-----------------------------------VSTLRGSVPEAKLSTYYLDEDMRISRMSDDHVFVFVR 213
BLAST of mRNA_P-wetherbeei_contig1349.4.2 vs. uniprot
Match: A0A6V1MSR7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1MSR7_HETAK) HSP 1 Score: 212 bits (540), Expect = 3.730e-65 Identity = 109/223 (48.88%), Postives = 154/223 (69.06%), Query Frame = 1
Query: 4 DPELKAKVKGLLMQMAATSNRGQLATAEEKSVALDLVFQVGDGNDDASSFLLCGFPRGTWELVLSDTQLFRSSPFFMALGELFGEDRERAETVFALHRAATSNGEIGRVRQIISESELVSELDLSVGILAGIPFAMKGTVVTKAAIAPSSSETFSVMVQTSTVTNSNLLPFM---DNAVELPVESLYSSLRGSVPEVKLSTYYLDDNMRISRTPDDHFFVYVR 663
D + K+K ++ + AT+NRGQ+A+ +EK + +DLV+Q+ N + + + GTWELV SD +LFRSSPFFMA+ +LFG+D E+A F+LHR ATS EIG+V+QI+ S LVSE+DL VG + +PFA+ GTVV+ A + + ++ V V + V+NSN+L F+ D +PV+ ++ LRGSVP V L+TYYLDD MRISRT D+HFFVY+R
Sbjct: 73 DVTYREKLKSEIIALGATTNRGQIASEDEKDIVIDLVYQLESMNPSPKTNIAASY--GTWELVYSDVELFRSSPFFMAVRDLFGDDDEKASQAFSLHRLATSTSEIGKVKQILGPSTLVSEVDLKVGTIPSLPFAITGTVVSDAEVTANGDQSLQVTVGKTKVSNSNILKFLNLEDMGAAVPVKDVFERLRGSVPTVPLNTYYLDDTMRISRTQDEHFFVYIR 293
BLAST of mRNA_P-wetherbeei_contig1349.4.2 vs. uniprot
Match: A0A836CGB3_9STRA (PAP_fibrillin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGB3_9STRA) HSP 1 Score: 199 bits (505), Expect = 2.560e-61 Identity = 109/226 (48.23%), Postives = 144/226 (63.72%), Query Frame = 1
Query: 4 DPELKAKVKGLLMQMAATSNRGQLATAEEKSVALDLVFQVGD------GNDDASSFLLCGFPRGTWELVLSDTQLFRSSPFFMALGELFGEDRERAETVFALHRAATSNGEIGRVRQIISESELVSELDLSVGILAGIPFAMKGTVVTKAAIAPSSSETFSVMVQTSTVTNSNLLPFMDNAVELPVESLYSSLRGSVPEVKLSTYYLDDNMRISRTPDDHFFVYVR 663
+P L+ +K +M +AAT+NRGQLA+ +EKS DLV+Q+ NDD + GTWEL+ SD Q FRSSPFFMA+GELF +DR R ET FALHRAAT+NGEIGRVRQ+IS SEL SE+DL VG+L+G+PF++ GTVV++A + ++++RGS PEV+LSTYYLD + R+SRTPD+H+F+Y R
Sbjct: 2 NPALRDSIKKEIMLLAATTNRGQLASDDEKSTVSDLVYQLEALNPTPVTNDDIAI-------GGTWELIFSDVQPFRSSPFFMAVGELFQDDRSRGETAFALHRAATANGEIGRVRQMISGSELTSEVDLRVGLLSGVPFSLSGTVVSRAKV-----------------------------------RAFTAIRGSAPEVRLSTYYLDSDFRVSRTPDEHYFIYTR 185
BLAST of mRNA_P-wetherbeei_contig1349.4.2 vs. uniprot
Match: A0A7S2Y236_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y236_9STRA) HSP 1 Score: 170 bits (430), Expect = 1.520e-48 Identity = 96/225 (42.67%), Postives = 141/225 (62.67%), Query Frame = 1
Query: 4 DPELKAKVKGLLMQMAATSNRGQLATAEEKSVALDLVFQVGDGNDDASSFLLCGFPRGTWELVLSDTQLFRSSPFFMALGELFG-EDRERAETVFALHRAATSNGEIGRVRQIISESELVSELDLSVGILAGIPFAMKGTVVTKAAIAPSSSETFSVMVQTSTVTNSN---LLPFMDNA-VELPVESLYSSLRGSVPEVKLSTYYLDDNMRISRTPDDHFFVYVR 663
D ++ ++K L+ +++ SNRG+ A+ ++++V DLV Q+ N + C G W+L LS TQ FRSSPFF+ + G ++ AE F +H AT+ G IGRVRQ I L SE+DL VG+ G+PF +KG+V+T+A+ P SSET + V + V SN L ++DN +ELPV ++ ++GSVP V+L TYY+D+ MRI+R DD+FFVY R
Sbjct: 77 DDIIRDELKRELLLLSSVSNRGEFASLDDQNVITDLVAQLEALNPTEDPAMKC---EGEWDLALSSTQFFRSSPFFLTIRAAMGASNKAMAENAFDIHDRATTAGRIGRVRQTIVGDTLTSEVDLEVGVFPGLPFRVKGSVITRASFRPVSSETAELQVGATEVKGSNIPILNQYLDNLKLELPVNQIFERIQGSVPTVELKTYYIDEGMRITRDMDDNFFVYTR 298
BLAST of mRNA_P-wetherbeei_contig1349.4.2 vs. uniprot
Match: A0A7S1D4Q9_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D4Q9_CYCTE) HSP 1 Score: 169 bits (428), Expect = 1.920e-48 Identity = 103/225 (45.78%), Postives = 139/225 (61.78%), Query Frame = 1
Query: 4 DPELKAKVKGLLMQMAATSNRGQLATAEEKSVALDLVFQVGDGNDDASSFLLCGFPRGTWELVLSDTQLFRSSPFFMALGELFGEDRER-AETVFALHRAATSNGEIGRVRQIISESELVSELDLSVGILAGIPFAMKGTVVTKAAIAPSSSETFSVMVQTSTVTNSN---LLPFMDNA-VELPVESLYSSLRGSVPEVKLSTYYLDDNMRISRTPDDHFFVYVR 663
D E++ +K LM +++ SNRG+ A+ EE+ +A+DLV Q+ N C G W+L LS TQ FR+SPFF ++ G++ + AE F +H AT+ IGRVRQ IS +LVSE+DL VG L G P +KGTVVT A++ SSET+ +Q + V SN L FMD+ ELPV Y+ L GSVP V L TYY+DD +RI+R DD+FFV+ R
Sbjct: 60 DEEIRVALKQELMLLSSISNRGEYASKEERDIAIDLVAQLEALNPTEMPASSC---EGEWDLCLSSTQFFRTSPFFQSIRVALGDENKAIAENGFDIHDRATTASRIGRVRQKISADKLVSEVDLEVGPLTGFPIRVKGTVVTTASLEVVSSETWETKIQMTQVKGSNIPLLNQFMDDLNFELPVADAYNMLSGSVPVVPLKTYYVDDGIRITRDVDDNFFVFSR 281
BLAST of mRNA_P-wetherbeei_contig1349.4.2 vs. uniprot
Match: A0A7R9Z4E9_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z4E9_9STRA) HSP 1 Score: 163 bits (412), Expect = 6.410e-47 Identity = 93/214 (43.46%), Postives = 138/214 (64.49%), Query Frame = 1
Query: 40 MQMAATSNRGQLATAEEKSVALDLVFQVGDGNDDASSFLLCGFPRGTWELVLSDTQLFRSSPFFMALGELFGEDRER-AETVFALHRAATSNGEIGRVRQIISESELVSELDLSVGILAGIPFAMKGTVVTKAAIAPSSSETFSVMVQTSTVTNSNLLPFMDN-----AVELPVESLYSSLRGSVPEVKLSTYYLDDNMRISRTPDDHFFVYVR 663
M +A+ ++RG A+ +E + +DLV Q+ N A L C G W+L L++TQLFRSSPFF+A+ G+D ++ A+ F LH ATS IGRVRQ + + E+VSE+DL VG+L G+P +KGTVVT A + + ET+ + V+ + VT SN+ PF+D VELPV YS++ G+ P L T+Y+DD++RI+R D++F+V+ R
Sbjct: 1 MVLASATDRGMYASKDEADIVVDLVTQLEALNPTADPALQC---EGEWDLTLTNTQLFRSSPFFLAIRSALGDDNKQIADNGFELHNRATSVSRIGRVRQTVKDGEVVSEVDLEVGLLPGLPVRVKGTVVTTAGLKVVAPETWELTVRGTRVTGSNV-PFLDEYLDDVKVELPVGDFYSTVLGNTPVSTLKTFYVDDSIRITRDCDENFYVFSR 210
BLAST of mRNA_P-wetherbeei_contig1349.4.2 vs. uniprot
Match: B8BQA8_THAPS (PAP_fibrillin domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQA8_THAPS) HSP 1 Score: 159 bits (401), Expect = 3.680e-44 Identity = 95/228 (41.67%), Postives = 142/228 (62.28%), Query Frame = 1
Query: 4 DPELKAKVKGLLMQMAATSNRGQLATAEEKSVALDLVFQVGDGNDDASSFLLCGFPRGTWELVLSDTQLFRSSPFFMALGELFGE-DRERAETVFALHRAATSNGEIGRVRQIISES--ELVSELDLSVGILAGIPFAMKGTVVTKAAIAPSSSETFSVMVQTSTVTNSNLLPFMD-----NAVELPVESLYSSLRGSVPEVKLSTYYLDDNMRISRTPDDHFFVYVR 663
D ++ ++K L+ +++ +NRGQ A+ EE+++ +DLV Q+ N A L +G WEL S TQ FRSSPFF+A+ GE ++ AE F +H AT+ +G+VRQI+ EL+SE +LSVG+L G+P +KGTV+T A + + ET+ + V+ + V SN+ PF D + +ELPV Y ++ GSVP L T+Y+D+ MRISR DD+FFV+ R
Sbjct: 79 DAIIRDELKRELLLLSSVTNRGQCASQEEENLVVDLVTQLEALNPTADPALNS---QGDWELCYSSTQSFRSSPFFLAIRSFMGESNKSMAENAFDIHDRATTASRVGKVRQIVDAGNMELISEYELSVGLLPGLPVRVKGTVITSADMRAIAPETWELTVKATKVKGSNV-PFFDQYLDDSGLELPVGEAYKAISGSVPVSVLKTFYVDEGMRISRDVDDNFFVFTR 302
BLAST of mRNA_P-wetherbeei_contig1349.4.2 vs. uniprot
Match: A0A7S4ADX8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ADX8_9STRA) HSP 1 Score: 158 bits (400), Expect = 5.190e-44 Identity = 90/225 (40.00%), Postives = 142/225 (63.11%), Query Frame = 1
Query: 4 DPELKAKVKGLLMQMAATSNRGQLATAEEKSVALDLVFQVGDGNDDASSFLLCGFPRGTWELVLSDTQLFRSSPFFMALGELFGED-RERAETVFALHRAATSNGEIGRVRQIISESELVSELDLSVGILAGIPFAMKGTVVTKAAIAPSSSETFSVMVQTSTVTNSNLL---PFMDNA-VELPVESLYSSLRGSVPEVKLSTYYLDDNMRISRTPDDHFFVYVR 663
D ++ +K L+ +A+ ++RG + +EK + +DLV Q+ N C G W+L S TQ FRSSPFF ++ GED ++ AE FALH ATS +GRVRQII+ +L SE+DL VG+ GIPF+++GTVV+ AA+ S + + + ++ + V SN+ F+DN +E+PV Y++L+G+ P + L+T+Y+DD +RI+R D++FFV++R
Sbjct: 80 DFAIRDALKQELLLLASVTDRGAYCSKDEKDIVIDLVAQLEALNPTKDPAFNC---EGEWDLGYSSTQFFRSSPFFQSIRVAVGEDNKDVAENGFALHAQATSGSRVGRVRQIITADKLTSEVDLEVGLAPGIPFSIQGTVVSSAALNVVSDKRWELRMENTKVKGSNIPLFNQFLDNLQMEVPVGDFYNTLQGTTPVIPLTTFYVDDTLRITRDVDENFFVFIR 301
BLAST of mRNA_P-wetherbeei_contig1349.4.2 vs. uniprot
Match: A0A6S8TX75_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8TX75_9STRA) HSP 1 Score: 158 bits (400), Expect = 5.900e-44 Identity = 96/233 (41.20%), Postives = 144/233 (61.80%), Query Frame = 1
Query: 4 DPELKAKVKGLLMQMAATSNRGQLATAEEKSVALDLVFQVGDGNDDASSFLLCGFPRGTWELVLSDTQLFRSSPFFMAL-GELFGEDRERAETVFALHRAATSNGEIGRVRQIISES-------ELVSELDLSVGILAGIPFAMKGTVVTKAAIAPSSSETFSVMVQTSTVTNSNLLPFMDN-----AVELPVESLYSSLRGSVPEVKLSTYYLDDNMRISRTPDDHFFVYVR 663
D ++ +K L+ +A+ +NRG+ A+ EEK + +DLV Q+ N A L C G W+LVLS TQ FRSSPFFMA+ + +++ E F +H AT+ IG VRQ I+ S EL+SE+D+++GIL G P ++GTV+T A + ++ ET+ V V+ + V SN+ PF+D +E+PV +Y S+RGSVP L T+Y+D+ +RI+R DD+FFV+ R
Sbjct: 79 DEAIRDALKRELLLLASVTNRGEFASPEEKDIIVDLVTQLEALNPTAEPALQCS---GEWDLVLSSTQSFRSSPFFMAIRAAVPDQNKAMVENGFNIHDRATTASRIGHVRQTIATSKNLAGDQELISEVDVNLGILPGFPVRVRGTVITTARLEMTAPETWFVTVKNTKVKGSNV-PFLDQYLDDYPLEVPVGDVYESVRGSVPVATLKTFYVDEGLRITRDVDDNFFVFSR 307
BLAST of mRNA_P-wetherbeei_contig1349.4.2 vs. uniprot
Match: B7FQN7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQN7_PHATC) HSP 1 Score: 157 bits (398), Expect = 9.090e-44 Identity = 89/226 (39.38%), Postives = 144/226 (63.72%), Query Frame = 1
Query: 1 ADPELKAKVKGLLMQMAATSNRGQLATAEEKSVALDLVFQVGDGNDDASSFLLCGFPRGTWELVLSDTQLFRSSPFFMALGELFGEDRER-AETVFALHRAATSNGEIGRVRQIISESELVSELDLSVGILAGIPFAMKGTVVTKAAIAPSSSETFSVMVQTSTVTNSNLL---PFMDNA-VELPVESLYSSLRGSVPEVKLSTYYLDDNMRISRTPDDHFFVYVR 663
AD ++ +K L+ +++ +NRG+ A+ +E+++ +D+V Q+ N A C +G W+L LS TQ FRSSPFF ++ GE+ + AE F +H AT+ +GRVRQ IS+++L+SE++L VG+L G P +KGTV+T A + S ET+ + + V SN+ F+D+A E+PV ++Y++L+G VP V + T+YLD+ +RI+R DD+ FV+ R
Sbjct: 75 ADSIIRDDLKRELLLLSSVTNRGEYASPDEQNIIVDIVAQLEALNPTADPASNC---QGEWDLALSSTQFFRSSPFFQSIRVAMGENNKAMAENAFDIHDRATTASRVGRVRQTISDTKLLSEVELEVGLLPGFPIRVKGTVITSATLDVVSPETWETRIIETHVKGSNIPIINEFLDDARFEIPVSNIYNTLQGQVPVVPMKTFYLDEGVRITRDIDDNIFVFTR 297 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1349.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1349.4.2 >prot_P-wetherbeei_contig1349.4.2 ID=prot_P-wetherbeei_contig1349.4.2|Name=mRNA_P-wetherbeei_contig1349.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=223bp ADPELKAKVKGLLMQMAATSNRGQLATAEEKSVALDLVFQVGDGNDDASSback to top mRNA from alignment at P-wetherbeei_contig1349:4141..5875- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1349.4.2 ID=mRNA_P-wetherbeei_contig1349.4.2|Name=mRNA_P-wetherbeei_contig1349.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1735bp|location=Sequence derived from alignment at P-wetherbeei_contig1349:4141..5875- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1349:4141..5875- >mRNA_P-wetherbeei_contig1349.4.2 ID=mRNA_P-wetherbeei_contig1349.4.2|Name=mRNA_P-wetherbeei_contig1349.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=669bp|location=Sequence derived from alignment at P-wetherbeei_contig1349:4141..5875- (Phaeothamnion wetherbeei SAG_119_79)back to top |