mRNA_P-wetherbeei_contig10288.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10288.1.1 vs. uniprot
Match: D7G547_ECTSI (GYF_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G547_ECTSI) HSP 1 Score: 75.5 bits (184), Expect = 7.680e-16 Identity = 46/85 (54.12%), Postives = 58/85 (68.24%), Query Frame = 1 Query: 1 MAE-WYYVD-SSNAQSGPVSPADLGRLYASTTVTNATLVWKDGLAGWEPLSSVGSLYAQVKAAIA-GPPVPTRGGAPPLPVKPAA 246 MAE WYYVD ++NAQ GP + +L RLYAS++VT++TL WKDG A W LS++ SL+AQV A GPP PP+P KP A Sbjct: 1 MAEAWYYVDDATNAQQGPCTIPELERLYASSSVTDSTLFWKDGQADWSALSALPSLHAQVTAPPQRGPPALPAKTLPPVPAKPRA 85
BLAST of mRNA_P-wetherbeei_contig10288.1.1 vs. uniprot
Match: A0A836C908_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C908_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 2.350e-13 Identity = 36/67 (53.73%), Postives = 49/67 (73.13%), Query Frame = 1 Query: 10 WYYVD-SSNAQSGPVSPADLGRLYASTTVTNATLVWKDGLAGWEPLSSVGSLYAQVKAAIAGPPVPT 207 W+YVD ++N QSGP + + L L A T+ + TL+W+DGL GWEPL+S+ SL +QVKA A PP+PT Sbjct: 5 WFYVDPATNTQSGPCNISQLAGLVARGTLGDGTLMWRDGLPGWEPLASIPSLISQVKAPKAAPPLPT 71
BLAST of mRNA_P-wetherbeei_contig10288.1.1 vs. uniprot
Match: A0A4V1N0S8_9GAMM (RDD family protein n=1 Tax=Pseudoxanthomonas composti TaxID=2137479 RepID=A0A4V1N0S8_9GAMM) HSP 1 Score: 65.1 bits (157), Expect = 1.810e-10 Identity = 33/76 (43.42%), Postives = 39/76 (51.32%), Query Frame = 1 Query: 1 MAEWYYVDSSNAQSGPVSPADLGRLYASTTVTNATLVWKDGLAGWEPLSSVGSLYAQVKAAIAGPPVPTRGGAPPL 228 M WYY D Q GP+ A L RL+ VT TLVW+DGLA W+PL A V+ PP P APP+ Sbjct: 1 MTNWYYADRLRQQQGPIDDAQLARLFQENAVTLDTLVWRDGLANWQPLRDFAGELALVEL----PPTPVVSAAPPV 72
BLAST of mRNA_P-wetherbeei_contig10288.1.1 vs. uniprot
Match: A0A7V8GKR8_9GAMM (Transporter n=1 Tax=Pseudoxanthomonas broegbernensis TaxID=83619 RepID=A0A7V8GKR8_9GAMM) HSP 1 Score: 63.5 bits (153), Expect = 5.800e-10 Identity = 28/51 (54.90%), Postives = 33/51 (64.71%), Query Frame = 1 Query: 1 MAEWYYVDSSNAQSGPVSPADLGRLYASTTVTNATLVWKDGLAGWEPLSSV 153 M EWYY D Q GPV+ A+L RL+ S V ATLVW+DGL W PLS + Sbjct: 1 MTEWYYADRQRQQQGPVAAAELARLFQSGQVDAATLVWRDGLPEWRPLSGL 51
BLAST of mRNA_P-wetherbeei_contig10288.1.1 vs. uniprot
Match: UPI001CE3B8E2 (RDD family protein n=1 Tax=Stenotrophomonas sp. Marseille-Q4652 TaxID=2866595 RepID=UPI001CE3B8E2) HSP 1 Score: 63.2 bits (152), Expect = 7.850e-10 Identity = 33/72 (45.83%), Postives = 45/72 (62.50%), Query Frame = 1 Query: 1 MAEWYYVDSSNAQSGPVSPADLGRLYASTTVTNATLVWKDGLAGWEPLSSVGS-LYAQVKAAIAGPPVPTRG 213 M+EWYY D+ Q GPVS +L + + TV +TLVW++G+A W+PLSS+ + L Q A PP PT G Sbjct: 1 MSEWYYADARRQQHGPVSSEELRAHFGAGTVDLSTLVWREGMAQWQPLSSMAAELDLQEPAPAPEPPEPTFG 72
BLAST of mRNA_P-wetherbeei_contig10288.1.1 vs. uniprot
Match: UPI0004630592 (RDD family protein n=3 Tax=Pseudoxanthomonas TaxID=83618 RepID=UPI0004630592) HSP 1 Score: 62.0 bits (149), Expect = 2.180e-9 Identity = 35/86 (40.70%), Postives = 50/86 (58.14%), Query Frame = 1 Query: 1 MAEWYYVDSSNAQSGPVSPADLGRLYASTTVTNATLVWKDGLAGWEPLSSVGSLYAQVKAAIAGPP-VPTRGGAPPLPVKPAAAVA 255 M +WYY D Q GP+ ++ RL+ + V ATLVW+DG+A W+PL G++ A++ A PP + R G P+P PA A A Sbjct: 1 MTQWYYADRQRRQLGPLPATEIARLFRAGEVDAATLVWRDGMAAWQPL---GTMRAELGMDEAPPPTLDFRAGPEPVPAAPAEAPA 83
BLAST of mRNA_P-wetherbeei_contig10288.1.1 vs. uniprot
Match: A0A352QSC3_9GAMM (Uncharacterized protein n=1 Tax=Arenimonas sp. TaxID=1872635 RepID=A0A352QSC3_9GAMM) HSP 1 Score: 60.5 bits (145), Expect = 8.800e-9 Identity = 26/48 (54.17%), Postives = 32/48 (66.67%), Query Frame = 1 Query: 1 MAEWYYVDSSNAQSGPVSPADLGRLYASTTVTNATLVWKDGLAGWEPL 144 M +WYYVD + + GPVSP L + Y VT +LVW+DGLA WEPL Sbjct: 1 MQQWYYVDRHHDRQGPVSPEGLAQAYRQGKVTRDSLVWRDGLAKWEPL 48
BLAST of mRNA_P-wetherbeei_contig10288.1.1 vs. uniprot
Match: UPI000419A0AD (RDD family protein n=1 Tax=Luteimonas mephitis TaxID=83615 RepID=UPI000419A0AD) HSP 1 Score: 59.7 bits (143), Expect = 1.410e-8 Identity = 31/70 (44.29%), Postives = 41/70 (58.57%), Query Frame = 1 Query: 1 MAEWYYVDSSNAQSGPVSPADLGRLYASTTVTNATLVWKDGLAGWEPLSSVGSLYAQVKAAIAGPPVPTR 210 MA+WYY D + GPVS ADL L+A+ + TLVW++GLA W+P S + +V AA P P R Sbjct: 1 MAQWYYSDYERNRHGPVSAADLAMLHANGQLAGDTLVWREGLAQWQPWHS---MIDEVVAATPAAPAPAR 67
BLAST of mRNA_P-wetherbeei_contig10288.1.1 vs. uniprot
Match: UPI001B336C2F (RDD family protein n=1 Tax=Pseudoxanthomonas helianthi TaxID=1453541 RepID=UPI001B336C2F) HSP 1 Score: 58.5 bits (140), Expect = 3.770e-8 Identity = 23/48 (47.92%), Postives = 35/48 (72.92%), Query Frame = 1 Query: 1 MAEWYYVDSSNAQSGPVSPADLGRLYASTTVTNATLVWKDGLAGWEPL 144 M+EW+Y D + + GPV A+L RL+ + +V TLVW++GL+GW+PL Sbjct: 1 MSEWHYADRNRQRHGPVESAELARLFRNGSVALDTLVWREGLSGWQPL 48
BLAST of mRNA_P-wetherbeei_contig10288.1.1 vs. uniprot
Match: UPI001389A28E (RDD family protein n=1 Tax=Pseudoxanthomonas taiwanensis TaxID=176598 RepID=UPI001389A28E) HSP 1 Score: 58.2 bits (139), Expect = 4.860e-8 Identity = 24/51 (47.06%), Postives = 36/51 (70.59%), Query Frame = 1 Query: 1 MAEWYYVDSSNAQSGPVSPADLGRLYASTTVTNATLVWKDGLAGWEPLSSV 153 M +WYY D+ Q GPV ++L +L+ + V +ATLVW++GLA W+PL +V Sbjct: 1 MNKWYYADAQRRQIGPVPASELVQLHQAGQVDDATLVWREGLANWQPLGTV 51 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10288.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10288.1.1 >prot_P-wetherbeei_contig10288.1.1 ID=prot_P-wetherbeei_contig10288.1.1|Name=mRNA_P-wetherbeei_contig10288.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=85bp MAEWYYVDSSNAQSGPVSPADLGRLYASTTVTNATLVWKDGLAGWEPLSSback to top mRNA from alignment at P-wetherbeei_contig10288:1816..2070- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10288.1.1 ID=mRNA_P-wetherbeei_contig10288.1.1|Name=mRNA_P-wetherbeei_contig10288.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=255bp|location=Sequence derived from alignment at P-wetherbeei_contig10288:1816..2070- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10288:1816..2070- >mRNA_P-wetherbeei_contig10288.1.1 ID=mRNA_P-wetherbeei_contig10288.1.1|Name=mRNA_P-wetherbeei_contig10288.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=255bp|location=Sequence derived from alignment at P-wetherbeei_contig10288:1816..2070- (Phaeothamnion wetherbeei SAG_119_79)back to top |