mRNA_P-wetherbeei_contig13467.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13467.1.1
Unique NamemRNA_P-wetherbeei_contig13467.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig13467.1.1 vs. uniprot
Match: A0A836CBP6_9STRA (Uridine kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBP6_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.700e-44
Identity = 75/109 (68.81%), Postives = 97/109 (88.99%), Query Frame = 1 
Query:    1 THRAVPRKVVILEG--ILIFSDAALRNEMDIKIFVDTEADIRFIRRLERDITERGRSPDSVIRQYLSTVRPMHEQFVEPAKQHCDIIVPVGVNSVVLDMVVSRLRFAIG 321
            T  A PR+VV+LEG  +L+FSD ALR E+DIKIFVDT+AD+R IRR++RD  ERGR+ +SVI+QYL+TVRPMHEQ+VEP+++HCD+IVP+G+N+V LD+VVSRLRFAIG
Sbjct:  193 TMTAEPRRVVLLEGECMLLFSDEALRKEIDIKIFVDTDADVRLIRRMKRDTVERGRTVESVIKQYLATVRPMHEQYVEPSRRHCDMIVPIGLNAVALDLVVSRLRFAIG 301
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BLAST of mRNA_P-wetherbeei_contig13467.1.1 vs. uniprot
Match: A0A7S2XXT8_9STRA (Uridine kinase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXT8_9STRA)

HSP 1 Score: 152 bits (383), Expect = 1.900e-44
Identity = 76/108 (70.37%), Postives = 93/108 (86.11%), Query Frame = 1 
Query:    1 THRAVPRKVVILEGILIFSDAALRNEMDIKIFVDTEADIRFIRRLERDITERGRSPDSVIRQYLSTVRPMHEQFVEPAKQHCDIIVPVGVNSVVLDMVVSRLRFAIGK 324
            T +A PR+V+I+EGILIF    L  E+D+KIFVDTE+DIR IRR+ERD  ERGRS +S++ QYL+TVRPMHEQFVEP+K+H DIIVP+G NSVVLDMV+SRLRFAIG+
Sbjct:   97 TIKAHPRRVIIVEGILIFDHPELIKELDMKIFVDTESDIRLIRRIERDRRERGRSLESIMEQYLTTVRPMHEQFVEPSKRHADIIVPLGGNSVVLDMVLSRLRFAIGE 204
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BLAST of mRNA_P-wetherbeei_contig13467.1.1 vs. uniprot
Match: A0A7V3NL73_9CHLR (Uridine kinase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7V3NL73_9CHLR)

HSP 1 Score: 141 bits (355), Expect = 4.760e-40
Identity = 71/109 (65.14%), Postives = 89/109 (81.65%), Query Frame = 1 
Query:    1 THRAVPRKVVILEGILIFSDAALRNEMDIKIFVDTEADIRFIRRLERDITERGRSPDSVIRQYLSTVRPMHEQFVEPAKQHCDIIVPVG-VNSVVLDMVVSRLRFAIGK 324
            T R  PR+V+++EGILIF+D ALR  MD+KIFVDT+ DIRFIRRL+RDI ERGRS +SVI QYLSTVRPMH +FVEP+K++ D+I+P G  N V LDMVV+R+   IG+
Sbjct:  104 TRRVEPRRVILVEGILIFADRALREMMDVKIFVDTDPDIRFIRRLQRDIRERGRSMESVIEQYLSTVRPMHMEFVEPSKRYADVIIPEGGFNVVALDMVVARILALIGE 212
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BLAST of mRNA_P-wetherbeei_contig13467.1.1 vs. uniprot
Match: A0A497A3L3_9CHLR (Uridine kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A497A3L3_9CHLR)

HSP 1 Score: 140 bits (353), Expect = 6.820e-40
Identity = 68/109 (62.39%), Postives = 92/109 (84.40%), Query Frame = 1 
Query:    1 THRAVPRKVVILEGILIFSDAALRNEMDIKIFVDTEADIRFIRRLERDITERGRSPDSVIRQYLSTVRPMHEQFVEPAKQHCDIIVPVG-VNSVVLDMVVSRLRFAIGK 324
            THR  PR+V+++EGILIF++ ALR+ MD+KI+VDT+ADIRFIRRL+RDI ERGR+ +SVI QYL+TVRPMH +FVEP+K++ D+I+P G  N V LDMVV+R+   +G+
Sbjct:   97 THRVEPRRVILVEGILIFAEPALRDLMDVKIYVDTDADIRFIRRLQRDIAERGRTMESVIEQYLTTVRPMHLEFVEPSKRYADVIIPEGGFNVVALDMVVARILEMVGE 205
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BLAST of mRNA_P-wetherbeei_contig13467.1.1 vs. uniprot
Match: A0A7C7UZ41_9CHLR (Uridine kinase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C7UZ41_9CHLR)

HSP 1 Score: 140 bits (352), Expect = 1.390e-39
Identity = 71/104 (68.27%), Postives = 88/104 (84.62%), Query Frame = 1 
Query:    1 THRAVPRKVVILEGILIFSDAALRNEMDIKIFVDTEADIRFIRRLERDITERGRSPDSVIRQYLSTVRPMHEQFVEPAKQHCDIIVPVG-VNSVVLDMVVSRLR 309
            T R  PR+VV++EGILIF+D ALR+ MD+KI+VDT+ADIRFIRRLERDITERGR+  SVI QYLSTVRPMH +FVEP+K++ D+I+P G  N V LDMVV+R+ 
Sbjct:  102 TQRVEPRRVVLVEGILIFADDALRDMMDVKIYVDTDADIRFIRRLERDITERGRTMRSVIDQYLSTVRPMHLEFVEPSKRYADVIIPEGGFNPVALDMVVARIE 205
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BLAST of mRNA_P-wetherbeei_contig13467.1.1 vs. uniprot
Match: A0A847FKF9_9CHLR (Uridine kinase n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A847FKF9_9CHLR)

HSP 1 Score: 139 bits (350), Expect = 2.050e-39
Identity = 67/104 (64.42%), Postives = 86/104 (82.69%), Query Frame = 1 
Query:    1 THRAVPRKVVILEGILIFSDAALRNEMDIKIFVDTEADIRFIRRLERDITERGRSPDSVIRQYLSTVRPMHEQFVEPAKQHCDIIVPVG-VNSVVLDMVVSRLR 309
            T R  P +V+ILEGILIF+D ALR  MD+KIFVDT+ DIRFIRRL+RDI ERGR+ DSVIRQY+ TVRPMH++FVEP+K++ D+I+P G  N V ++MV +R+R
Sbjct:   97 TRRVEPHRVIILEGILIFADEALRRLMDVKIFVDTDPDIRFIRRLQRDIAERGRTMDSVIRQYMGTVRPMHQEFVEPSKRYADVIIPEGGFNEVAMEMVAARIR 200
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BLAST of mRNA_P-wetherbeei_contig13467.1.1 vs. uniprot
Match: A0A7U9KMG0_9CHLR (Uridine kinase n=2 Tax=Anaerolinea thermolimosa TaxID=229919 RepID=A0A7U9KMG0_9CHLR)

HSP 1 Score: 139 bits (349), Expect = 3.530e-39
Identity = 68/109 (62.39%), Postives = 89/109 (81.65%), Query Frame = 1 
Query:    1 THRAVPRKVVILEGILIFSDAALRNEMDIKIFVDTEADIRFIRRLERDITERGRSPDSVIRQYLSTVRPMHEQFVEPAKQHCDIIVPVG-VNSVVLDMVVSRLRFAIGK 324
            T    PR+++++EGILIF + ALR E D+KIFVDT+ADIRFIRRL+RDI ERGR+ +SVIRQYL TVRPMH +FVEP K++ DII+P G +N+V LDMVV+R+   +G+
Sbjct:  101 TIHVEPRRIILVEGILIFYEPALRAEFDVKIFVDTDADIRFIRRLQRDIVERGRTTESVIRQYLETVRPMHLEFVEPTKRYADIIIPEGGLNTVALDMVVARIEALLGR 209
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BLAST of mRNA_P-wetherbeei_contig13467.1.1 vs. uniprot
Match: A0A3C0ZYX0_9CHLR (Uridine kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3C0ZYX0_9CHLR)

HSP 1 Score: 137 bits (345), Expect = 1.200e-38
Identity = 71/109 (65.14%), Postives = 87/109 (79.82%), Query Frame = 1 
Query:    1 THRAVPRKVVILEGILIFSDAALRNEMDIKIFVDTEADIRFIRRLERDITERGRSPDSVIRQYLSTVRPMHEQFVEPAKQHCDIIVPVG-VNSVVLDMVVSRLRFAIGK 324
            T R   R V ++EGILIF+D ALR  MDIKIFVDT+ADIRFIRRL+RDITERGR+ +SVIRQYL TVRPMH +FVEP+K++ DII+P G  N   +DMVV+R+   +GK
Sbjct:   97 TRRVESRGVTLVEGILIFTDKALRELMDIKIFVDTDADIRFIRRLQRDITERGRTMESVIRQYLGTVRPMHLEFVEPSKRYADIIIPEGGFNVTAIDMVVARVEAMMGK 205
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BLAST of mRNA_P-wetherbeei_contig13467.1.1 vs. uniprot
Match: A0A1F8PPS1_9CHLR (Uridine kinase n=1 Tax=Chloroflexi bacterium RBG_16_52_11 TaxID=1797646 RepID=A0A1F8PPS1_9CHLR)

HSP 1 Score: 137 bits (345), Expect = 1.380e-38
Identity = 67/104 (64.42%), Postives = 88/104 (84.62%), Query Frame = 1 
Query:    1 THRAVPRKVVILEGILIFSDAALRNEMDIKIFVDTEADIRFIRRLERDITERGRSPDSVIRQYLSTVRPMHEQFVEPAKQHCDIIVPVG-VNSVVLDMVVSRLR 309
            THR  P+ V+++EGILIF +A LR   DIKIFVDT+ DIRFIRRL+RDITERGR+ +SVI+QYL+TVRPMH +FVEP+K++ D+I+P G +N+V +DMVV+RL 
Sbjct:  101 THRITPQPVILVEGILIFIEAELRKLFDIKIFVDTDPDIRFIRRLQRDITERGRTTESVIQQYLTTVRPMHLEFVEPSKRYADVIIPEGGLNTVAMDMVVARLE 204
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BLAST of mRNA_P-wetherbeei_contig13467.1.1 vs. uniprot
Match: A0A7C5UQH0_9CHLR (Uridine kinase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C5UQH0_9CHLR)

HSP 1 Score: 137 bits (345), Expect = 1.420e-38
Identity = 66/104 (63.46%), Postives = 86/104 (82.69%), Query Frame = 1 
Query:    1 THRAVPRKVVILEGILIFSDAALRNEMDIKIFVDTEADIRFIRRLERDITERGRSPDSVIRQYLSTVRPMHEQFVEPAKQHCDIIVPVG-VNSVVLDMVVSRLR 309
            T   +P +V++LEGILIF+D  LR  MD+KI+VDT+AD+RFIRRLERDI ERGR+ +SVIRQYL TVRPMH +FVEP+K++ DII+P G  N++ +DMVVSR+ 
Sbjct:   97 TRTVLPHRVILLEGILIFADKTLREMMDVKIYVDTDADLRFIRRLERDIAERGRTMESVIRQYLETVRPMHLEFVEPSKRYADIIIPEGGFNTIAIDMVVSRIE 200
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13467.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CBP6_9STRA1.700e-4468.81Uridine kinase n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A7S2XXT8_9STRA1.900e-4470.37Uridine kinase n=1 Tax=Fibrocapsa japonica TaxID=9... [more]
A0A7V3NL73_9CHLR4.760e-4065.14Uridine kinase n=1 Tax=Anaerolineae bacterium TaxI... [more]
A0A497A3L3_9CHLR6.820e-4062.39Uridine kinase n=1 Tax=Chloroflexi bacterium TaxID... [more]
A0A7C7UZ41_9CHLR1.390e-3968.27Uridine kinase n=1 Tax=Anaerolineae bacterium TaxI... [more]
A0A847FKF9_9CHLR2.050e-3964.42Uridine kinase n=1 Tax=Anaerolineaceae bacterium T... [more]
A0A7U9KMG0_9CHLR3.530e-3962.39Uridine kinase n=2 Tax=Anaerolinea thermolimosa Ta... [more]
A0A3C0ZYX0_9CHLR1.200e-3865.14Uridine kinase n=1 Tax=Chloroflexi bacterium TaxID... [more]
A0A1F8PPS1_9CHLR1.380e-3864.42Uridine kinase n=1 Tax=Chloroflexi bacterium RBG_1... [more]
A0A7C5UQH0_9CHLR1.420e-3863.46Uridine kinase n=1 Tax=Anaerolineae bacterium TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13467contigP-wetherbeei_contig13467:761..1624 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog112098.XP_008608560.1
PFAMsNPL4,PRK,UN_NPL4
Model size327
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00017
KEGG koko:K00876
KEGG ReactionR00513,R00516,R00517,R00962,R00964,R00967,R00968,R00970,R01548,R01549,R01880,R02091,R02096,R02097,R02327,R02332,R02371,R02372,R08232
KEGG Pathwayko00240,ko00983,ko01100,map00240,map00983,map01100
Hectar predicted targeting categoryother localisation
Exons2
Evalue9.78e-38
EggNOG OGsCOG0572@1|root,KOG4203@2759|Eukaryota
Ec32 ortholog descriptionUridine kinase like
Ec32 orthologEc-17_003720.1
EC2.7.1.48
DescriptionUMP salvage
Cds size327
COG categoryF
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185986.683417-CDS-P-wetherbeei_contig13467:760..9101683185986.683417-CDS-P-wetherbeei_contig13467:760..910Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13467 761..910 -
1683185986.696589-CDS-P-wetherbeei_contig13467:1447..16241683185986.696589-CDS-P-wetherbeei_contig13467:1447..1624Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13467 1448..1624 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13467.1.1prot_P-wetherbeei_contig13467.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13467 761..1624 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13467.1.1

>prot_P-wetherbeei_contig13467.1.1 ID=prot_P-wetherbeei_contig13467.1.1|Name=mRNA_P-wetherbeei_contig13467.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=109bp
THRAVPRKVVILEGILIFSDAALRNEMDIKIFVDTEADIRFIRRLERDIT
ERGRSPDSVIRQYLSTVRPMHEQFVEPAKQHCDIIVPVGVNSVVLDMVVS
RLRFAIGK*
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mRNA from alignment at P-wetherbeei_contig13467:761..1624-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13467.1.1 ID=mRNA_P-wetherbeei_contig13467.1.1|Name=mRNA_P-wetherbeei_contig13467.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=864bp|location=Sequence derived from alignment at P-wetherbeei_contig13467:761..1624- (Phaeothamnion wetherbeei SAG_119_79)
ACGCACAGGGCGGTGCCCCGCAAGGTGGTCATTCTGGAAGGAATTTTGAT
CTTCTCGGATGCGGCGCTCCGAAACGAAATGGACATCAAGATCTTTGTGG
ATACCGAGGCCGACATCCGCTTCATCCGGCGGCTAGAGCGGGACATCACC
GAGCGCGGCCGTTCTCCCGACAGCGTGGTGAGAGATTTCGAGCAGCGTAA
GCTCGCCGCTTCGTCTCTTGTGCTTTTTTTCCGAGTCAGCACTGGTGTGG
GCGATGGGTGTTCTAGTCCCAGCGGCTTTCGGGGTCGACGCTGGGTGCGT
GTTTTGGCCTTGGCTAGTGCTTGTTTTGGGGGGGCTGGTGTGGTTGAGTT
CCCGCCGTTGCTTGCTGTGTGCTTTGCATTCCTGGACGGCGTTGGTGTCA
ATTGCACGACGTCCATCCGATTGCTGCTTGGGGTTAGATCTCTGTTGTTC
CTTTCCCGCTTTATTCTTTATCTAGCTCTTCATCTCTTCCGTTAGTCTCC
GGAAGATGCATATCCTACGACCATTTCAGCCACTTTTTTATACCGCTGCT
GCTGCCGACGGGGAACCTTCCAGCACCAACGTGCCGCCGATTACCAACCA
GCCCACCGAACACATGCCGTCTTTCTGTTCCCTCTGCCGCAACGCGCCAG
AATTTTACCCAAATTCCACCAAAACCTGTCAAAATCCCGCCAAAACCCTG
CAATCTCATAACAGATTCGGCAGTACCTGTCGACGGTGCGGCCGATGCAC
GAGCAGTTCGTGGAGCCGGCCAAGCAGCACTGCGACATCATCGTGCCGGT
CGGCGTCAACTCGGTCGTGCTCGATATGGTCGTCTCCCGCCTCCGCTTCG
CCATCGGCAAGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13467:761..1624-

>mRNA_P-wetherbeei_contig13467.1.1 ID=mRNA_P-wetherbeei_contig13467.1.1|Name=mRNA_P-wetherbeei_contig13467.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=327bp|location=Sequence derived from alignment at P-wetherbeei_contig13467:761..1624- (Phaeothamnion wetherbeei SAG_119_79)
ACGCACAGGGCGGTGCCCCGCAAGGTGGTCATTCTGGAAGGAATTTTGAT
CTTCTCGGATGCGGCGCTCCGAAACGAAATGGACATCAAGATCTTTGTGG
ATACCGAGGCCGACATCCGCTTCATCCGGCGGCTAGAGCGGGACATCACC
GAGCGCGGCCGTTCTCCCGACAGCGTGATTCGGCAGTACCTGTCGACGGT
GCGGCCGATGCACGAGCAGTTCGTGGAGCCGGCCAAGCAGCACTGCGACA
TCATCGTGCCGGTCGGCGTCAACTCGGTCGTGCTCGATATGGTCGTCTCC
CGCCTCCGCTTCGCCATCGGCAAGTAG
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