mRNA_P-wetherbeei_contig13461.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13461.1.1 vs. uniprot
Match: A0A8K1CHK6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHK6_PYTOL) HSP 1 Score: 108 bits (270), Expect = 1.650e-24 Identity = 55/159 (34.59%), Postives = 74/159 (46.54%), Query Frame = 1
Query: 1 QVCLLICDAEDGYRLQQCGHVFCLGCISAFLSSKVKDGQVFPACFHLGLPAAVPADGAAAIDEAGSPATAAHSACGRPIAEMDILRLLDPPTRAKYRRFRFAKENPTARNCPRCEHPQLGGTAVESAMRCQKCSHSYCFVHGDAHVSGTCADYERANRE 477
Q+C + L +CGH FC C + +L K++DGQV+P CFH + + T ACG I+ DI ++ +KY F+F KE AR CP C Q + C C YC+ HG+AH GTCADYER+ E
Sbjct: 5 QICYENAPESTAFTLSECGHQFCRSCFARYLELKIRDGQVYPTCFH---------------EVESTDGTDTRVACGCVISPSDIESVVSCEVWSKYATFKFNKETKHARQCPYCSFSQACDGPEHPEVSCGGCKRVYCYTHGNAHEQGTCADYERSQAE 148
BLAST of mRNA_P-wetherbeei_contig13461.1.1 vs. uniprot
Match: A0A8K1CHA1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHA1_PYTOL) HSP 1 Score: 107 bits (267), Expect = 4.950e-23 Identity = 60/169 (35.50%), Postives = 80/169 (47.34%), Query Frame = 1
Query: 1 QVCLLICDAEDGYRLQQCGHVFCLGCISAFLSSKVKDGQVFPACFH-LGLPAAVPADGAAAIDEAGSPATAAHSACGRPIAEMDILRLLDPPTRAKYRRFRFAKENPTARNCPRCEHPQLGGTAVESAMRCQKCSHSYCFVHGDAHVSGTCADYERANREGEGTRRVRV 504
Q+C + L CGH FC+ C +L K+ DGQV+PACFH +G +D+A + ACG I +I L++ KY F+F KEN R CP C + QL C+ C +YCF HG+AH S +CADYE E E R +
Sbjct: 229 QICYENNSLANSIELITCGHRFCIQCFKMYLEFKIVDGQVYPACFHEIG-----------EVDDA----SGKRKACGARIEPSEIELLVNSEVWKKYLTFKFNKENQYGRQCPYCGYSQLCAGPEHPECICESCGKAYCFTHGNAHASSSCADYEMRQLESEKLNRSAI 382
BLAST of mRNA_P-wetherbeei_contig13461.1.1 vs. uniprot
Match: A0A7S2XFV0_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XFV0_9EUKA) HSP 1 Score: 103 bits (258), Expect = 3.920e-22 Identity = 57/154 (37.01%), Postives = 77/154 (50.00%), Query Frame = 1
Query: 13 LICD----AEDGYRLQQCGHVFCLGCISAFLSSKVKDGQVFPACFHLGLPAAVPADGAAAIDEAGSPATAAHSACGRPIAEMDILRLLDPPTRAKYRRFRFAKENPTARNCPRCEHPQLGGTAVESAMRCQKCSHSYCFVHGDAHVSG-TCADY 459
LIC ++G+ LQ CGH++C C +L+ V DG+V P CF + +D G P C +P++ DI RLLDP T KY RF +N R+CP+C Q G M+C KC H +CF H +AH TCA+Y
Sbjct: 101 LICQNNNSVDEGFALQNCGHMYCRSCFKKYLTLMVNDGKVHPRCFF----------NPSVLDRKGPP-------CNKPVSTGDIKRLLDPETFEKYERFLRRDQNSLMRDCPKCNADQPGDPE-RPWMKCVKCGHGFCFEHANAHPKEVTCAEY 236
BLAST of mRNA_P-wetherbeei_contig13461.1.1 vs. uniprot
Match: A0A7S3YF03_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YF03_9EUKA) HSP 1 Score: 100 bits (249), Expect = 6.810e-21 Identity = 55/154 (35.71%), Postives = 78/154 (50.65%), Query Frame = 1
Query: 13 LICD----AEDGYRLQQCGHVFCLGCISAFLSSKVKDGQVFPACFHLGLPAAVPADGAAAIDEAGSPATAAHSACGRPIAEMDILRLLDPPTRAKYRRFRFAKENPTARNCPRCEHPQLGGTAVESAMRCQKCSHSYCFVHGDAHVSG-TCADY 459
LIC ++G+ LQ CGH++C C +L+ KV DG+V P CF+ + +D G P C +PI+ DI RLLDP + KY +F +N R+CP+C Q G M C +C H +CF H +AH +CA+Y
Sbjct: 98 LICQNNNSIDEGFALQNCGHMYCRSCFKEYLTLKVNDGKVHPRCFY----------NPSVLDRKGPP-------CNQPISSGDIRRLLDPESFQKYEKFLRRDQNSLMRDCPKCNVDQPGDPE-RPWMTCVECDHGFCFEHANAHPKDVSCAEY 233
BLAST of mRNA_P-wetherbeei_contig13461.1.1 vs. uniprot
Match: A0A7S1B5E8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B5E8_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 1.180e-19 Identity = 54/162 (33.33%), Postives = 81/162 (50.00%), Query Frame = 1
Query: 22 DAEDGYRLQQCGHVFCLGCISAFLSSKVKDGQVFPACFHLGLPAAVPADGAAAIDEAGSPATAAHSACGRPIAEMDILRLL--DPPTRAKYRRFRFAKENPTARNCPRCEHPQLGG--TAVESAMRC----------QKCSHSYCFVHGDAHVSGTCADYER 465
+ D ++L CGHVFC C +L SK+++G V+P CF P + + S + ++ CG I +DI L D T KY R+++ KENP+AR CP C+ P + +S+M+C + C +C+ H AHV TCA YE+
Sbjct: 292 NGYDPFQLSVCGHVFCKSCFVPYLKSKIEEGDVYPTCFF-------PIENVVSDSAVNS---SKYTPCGVHIPHIDIKECLKKDSKTLKKYHRYKYDKENPSARRCPDCDAPNSFKMISVKKSSMKCKVPKNPICFCENCDREFCYYHAGAHVGKTCAQYEK 443
BLAST of mRNA_P-wetherbeei_contig13461.1.1 vs. uniprot
Match: A0A8K1CID9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CID9_PYTOL) HSP 1 Score: 69.7 bits (169), Expect = 2.030e-10 Identity = 49/179 (27.37%), Postives = 69/179 (38.55%), Query Frame = 1
Query: 88 FLSSKVKDGQVFPACFHLGLPAAVPADGAAAIDEAGSPATAAHSACGRPIAEMDILRLLDPPTRAKYRRFRFAKENPTARNCPRCEHPQLGGTAVESAMRCQKCSHSYCFVHGDAHVSGTCADYERANREGEGTRRVRVGLTEEEQGRILPCHFFPERNRKDQSTSLQNSSERILSACC 624
+L K++DGQV+P+CFH ACG I+ DI ++ KY F+F KE CP C Q + C C YC+VHG AH G AD++ E E R+ VG ++ G C + ++ +T E L C
Sbjct: 6 YLEIKIRDGQVYPSCFH----------------------EVETRACGIQISPSDIQAVVSNDIWTKYNTFKFKKETQHPGECPYCGFTQACEGPEHPEVTCGGCHLVYCYVHGRAHEGGNYADFKLKQSETEKLSRLVVGTSKPYPG----CQYNVDKEGNGCNTLKYTKCETELCWIC 158
BLAST of mRNA_P-wetherbeei_contig13461.1.1 vs. uniprot
Match: X6LUA8_RETFI (Uncharacterized protein (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6LUA8_RETFI) HSP 1 Score: 56.2 bits (134), Expect = 1.160e-5 Identity = 28/60 (46.67%), Postives = 35/60 (58.33%), Query Frame = 1
Query: 286 YRRFRFAKENPTARNCPRCEHPQLGGTAVESAMRCQKCSHSYCFVHGDAHVSG-TCADYE 462
Y+RF+ ENP AR CP C+H Q+G S M C +C+ YCF H AH + TC YE
Sbjct: 1 YQRFKENLENPNARQCPSCQHTQIGDPHYPS-MVCSQCAALYCFYHSTAHGNEETCEAYE 59
BLAST of mRNA_P-wetherbeei_contig13461.1.1 vs. uniprot
Match: A0A6H5LD10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD10_9PHAE) HSP 1 Score: 56.6 bits (135), Expect = 1.330e-5 Identity = 22/47 (46.81%), Postives = 33/47 (70.21%), Query Frame = 1
Query: 1 QVCLLICDAEDGYRLQQCGHVFCLGCISAFLSSKVKDGQVFPACFHL 141
Q+CL AE G+ L CGH+FC C+ A+++SK+ D +V PACF++
Sbjct: 144 QICLDDRPAEAGFVLSACGHLFCRECLKAYVTSKINDAEVHPACFNV 190
BLAST of mRNA_P-wetherbeei_contig13461.1.1 vs. uniprot
Match: A0A8K1CIW2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIW2_PYTOL) HSP 1 Score: 55.1 bits (131), Expect = 3.760e-5 Identity = 19/46 (41.30%), Postives = 27/46 (58.70%), Query Frame = 1
Query: 1 QVCLLICDAEDGYRLQQCGHVFCLGCISAFLSSKVKDGQVFPACFH 138
Q+C ++L CGH FC C + +L K++DGQV+P CFH
Sbjct: 214 QICYENAPVSTAFKLSACGHQFCRSCFAQYLEVKIRDGQVYPTCFH 259 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13461.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13461.1.1 >prot_P-wetherbeei_contig13461.1.1 ID=prot_P-wetherbeei_contig13461.1.1|Name=mRNA_P-wetherbeei_contig13461.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=151bp MDILRLLDPPTRAKYRRFRFAKENPTARNCPRCEHPQLGGTAVESAMRCQback to top mRNA from alignment at P-wetherbeei_contig13461:110..928- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13461.1.1 ID=mRNA_P-wetherbeei_contig13461.1.1|Name=mRNA_P-wetherbeei_contig13461.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=819bp|location=Sequence derived from alignment at P-wetherbeei_contig13461:110..928- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13461:110..928- >mRNA_P-wetherbeei_contig13461.1.1 ID=mRNA_P-wetherbeei_contig13461.1.1|Name=mRNA_P-wetherbeei_contig13461.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=453bp|location=Sequence derived from alignment at P-wetherbeei_contig13461:110..928- (Phaeothamnion wetherbeei SAG_119_79)back to top |