mRNA_P-wetherbeei_contig10285.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10285.1.1 vs. uniprot
Match: A0A835Z8G7_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G7_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 1.930e-13 Identity = 42/81 (51.85%), Postives = 49/81 (60.49%), Query Frame = 1 Query: 31 KRLFVSRPPRVLCLHFCRRHYCARRGGMVRLRQRVVFPETLDLEPYHVDGDDDGGAAGGGPILYRLQAVIEHHGSAEGGHY 273 KRL ++R PRVLCLHFCRRHY R MV+L QRV FP L + G +A LY L+AVI H GSA+ GHY Sbjct: 276 KRLSLARLPRVLCLHFCRRHYSPSRERMVKLSQRVRFPLELTRDGLARCG----ASAAADSDLYLLRAVIVHQGSADAGHY 352
BLAST of mRNA_P-wetherbeei_contig10285.1.1 vs. uniprot
Match: A0A7S2VHG5_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2VHG5_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 8.730e-12 Identity = 37/87 (42.53%), Postives = 49/87 (56.32%), Query Frame = 1 Query: 31 KRLFVSRPPRVLCLHFCRRHYCARRGGMVRLRQRVVFPETLDLEPY------HVDGDDDGGAAGGGPILYRLQAVIEHHGSAEGGHY 273 K + RPPRVLC+H RRH+ GMV++ +RV FPE LDL Y + D + + Y+L +V+EH GSA GGHY Sbjct: 381 KATLIMRPPRVLCIHVQRRHFDMASQGMVKISRRVHFPEVLDLSNYCAYAENSFEKDCTTKSIDWPKLPYKLMSVVEHKGSAFGGHY 467
BLAST of mRNA_P-wetherbeei_contig10285.1.1 vs. uniprot
Match: J9EE29_9SPIT (Poly n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9EE29_9SPIT) HSP 1 Score: 58.9 bits (141), Expect = 4.210e-8 Identity = 36/89 (40.45%), Postives = 46/89 (51.69%), Query Frame = 1 Query: 31 KRLFVSRPPRVLCLHFCRRHYCARRGGMVRLRQRVVFPETLDLEP--------YHVDGDDDGGAAGGGPILYRLQAVIEHHGSAEGGHY 273 K+ V+ PP++LCLH R Y + G +V RQ+V +P+ LDL Y VD + YRL VIEH GSA GGHY Sbjct: 1239 KKFSVANPPKILCLHIKRVVY-SNTGDIVLNRQQVQYPDVLDLSKISSIKQNGYQVD------------VKYRLSGVIEHFGSAFGGHY 1314
BLAST of mRNA_P-wetherbeei_contig10285.1.1 vs. uniprot
Match: UPI000C6E5264 (ubiquitin carboxyl-terminal hydrolase 36-like isoform X2 n=2 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6E5264) HSP 1 Score: 58.2 bits (139), Expect = 7.700e-8 Identity = 36/87 (41.38%), Postives = 45/87 (51.72%), Query Frame = 1 Query: 16 RVRCRKRLFVSRPPRVLCLHFCRRHYCARRGGMVRLRQRVVFPETLDLEPYHVDGDDDGGAAGGGPILYRLQAVIEHHG-SAEGGHY 273 +V +KR V RPP V F R Y GG ++ + V +PE LDL PY D GGP++YRL AV+ H G S GHY Sbjct: 41 KVSAQKRFTVHRPPNVATFQFKRFDYNRMFGG--KITKHVSYPEKLDLRPYMSDTK-------GGPVIYRLNAVLVHLGPSCNSGHY 118
BLAST of mRNA_P-wetherbeei_contig10285.1.1 vs. uniprot
Match: A0A6S7LHW8_LACSI (Ubiquitin carboxyl-terminal hydrolase n=4 Tax=Lactuca TaxID=4235 RepID=A0A6S7LHW8_LACSI) HSP 1 Score: 54.3 bits (129), Expect = 1.730e-6 Identity = 34/83 (40.96%), Postives = 44/83 (53.01%), Query Frame = 1 Query: 31 KRLFVSRPPRVLCLHFCRRHYCARRGGMVRLRQRVVFPETLDLEPYHVDG--DDDGGAAGGGPILYRLQAVIEHHGSAEGGHY 273 KR+ +S+ P +L +H R AR G + +L V F +T+DLEPY D GG Y L V+EH GSA GGHY Sbjct: 692 KRILISKVPPILTIHLKRLSQDAR-GRLSKLNGHVDFKDTIDLEPYMDPSCCKDKGGER----YQYGLIGVVEHSGSARGGHY 769
BLAST of mRNA_P-wetherbeei_contig10285.1.1 vs. uniprot
Match: UPI0003F08669 (ubiquitin carboxyl-terminal hydrolase 42-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F08669) HSP 1 Score: 51.6 bits (122), Expect = 1.520e-5 Identity = 33/82 (40.24%), Postives = 42/82 (51.22%), Query Frame = 1 Query: 31 KRLFVSRPPRVLCLHFCRRHYCARRGGMVRLRQRVVFPETLDLEPYHVDGDDDGGAAGGGPILYRLQAVIEHHG-SAEGGHY 273 K+L V R P VL + R + G ++ + V +PE LDL PY GGPI+YRL AV+ HHG S GHY Sbjct: 9 KKLTVHRAPNVLTISLKRFDFHRFMGS--KINKDVRYPEILDLHPYMSQKT-------GGPIMYRLYAVLVHHGYSCNSGHY 81
BLAST of mRNA_P-wetherbeei_contig10285.1.1 vs. uniprot
Match: C1H0N3_PARBA (Ubiquitinyl hydrolase 1 n=5 Tax=Paracoccidioides TaxID=38946 RepID=C1H0N3_PARBA) HSP 1 Score: 51.6 bits (122), Expect = 1.560e-5 Identity = 30/79 (37.97%), Postives = 38/79 (48.10%), Query Frame = 1 Query: 37 LFVSRPPRVLCLHFCRRHYCARRGGMVRLRQRVVFPETLDLEPYHVDGDDDGGAAGGGPILYRLQAVIEHHGSAEGGHY 273 +F S PP VL LH R Y R M+++ R+ FPE D PY D D P +Y+L V+ H G GHY Sbjct: 406 IFESFPP-VLHLHLKRFEYDINRDAMMKINDRLEFPEEFDAAPYLSDDADKSE-----PWVYQLHGVLVHSGDFNAGHY 478
BLAST of mRNA_P-wetherbeei_contig10285.1.1 vs. uniprot
Match: A0A6A0GQQ2_HYAAZ (USP domain-containing protein n=1 Tax=Hyalella azteca TaxID=294128 RepID=A0A6A0GQQ2_HYAAZ) HSP 1 Score: 51.2 bits (121), Expect = 2.040e-5 Identity = 32/90 (35.56%), Postives = 45/90 (50.00%), Query Frame = 1 Query: 31 KRLFVSRPPRVLCLHFCRRHYCARRGGMVRLRQRVVFPETLDLEPYHV--------DGDDDGGAAGGGP-ILYRLQAVIEHHGSAEGGHY 273 KR+ + + P VL LH R + R G + R RV +P LD+ + + + G+ P +LY LQAVIEH GSA GH+ Sbjct: 328 KRITIGKLPEVLVLHINRTMWTDRDGAAFKRRDRVWYPLLLDMSCFTYTSATCRGNEAEFSSGSEVREPSVLYELQAVIEHSGSASSGHF 417
BLAST of mRNA_P-wetherbeei_contig10285.1.1 vs. uniprot
Match: A6QT10_AJECN (Ubiquitinyl hydrolase 1 n=5 Tax=Histoplasma TaxID=5036 RepID=A6QT10_AJECN) HSP 1 Score: 50.4 bits (119), Expect = 3.990e-5 Identity = 29/79 (36.71%), Postives = 38/79 (48.10%), Query Frame = 1 Query: 37 LFVSRPPRVLCLHFCRRHYCARRGGMVRLRQRVVFPETLDLEPYHVDGDDDGGAAGGGPILYRLQAVIEHHGSAEGGHY 273 +F S PP VL LH R Y R M+++ R+ FPE D PY + D P +Y+L V+ H G GHY Sbjct: 410 IFESFPP-VLHLHLKRFEYDINRDAMMKINDRLEFPEEFDAAPYLSEDADKSE-----PWIYQLHGVLVHSGDFNAGHY 482
BLAST of mRNA_P-wetherbeei_contig10285.1.1 vs. uniprot
Match: C5GI29_AJEDR (Ubiquitinyl hydrolase 1 n=18 Tax=Ajellomycetaceae TaxID=299071 RepID=C5GI29_AJEDR) HSP 1 Score: 50.4 bits (119), Expect = 3.990e-5 Identity = 29/79 (36.71%), Postives = 38/79 (48.10%), Query Frame = 1 Query: 37 LFVSRPPRVLCLHFCRRHYCARRGGMVRLRQRVVFPETLDLEPYHVDGDDDGGAAGGGPILYRLQAVIEHHGSAEGGHY 273 +F S PP VL LH R Y R M+++ R+ FPE D PY + D P +Y+L V+ H G GHY Sbjct: 433 IFESFPP-VLHLHLKRFEYDINRDAMMKINDRLEFPEEFDAAPYLSEDADKSE-----PWIYQLHGVLVHSGDFNAGHY 505 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10285.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10285.1.1 >prot_P-wetherbeei_contig10285.1.1 ID=prot_P-wetherbeei_contig10285.1.1|Name=mRNA_P-wetherbeei_contig10285.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=91bp SPPARRVRCRKRLFVSRPPRVLCLHFCRRHYCARRGGMVRLRQRVVFPETback to top mRNA from alignment at P-wetherbeei_contig10285:606..1160+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10285.1.1 ID=mRNA_P-wetherbeei_contig10285.1.1|Name=mRNA_P-wetherbeei_contig10285.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=555bp|location=Sequence derived from alignment at P-wetherbeei_contig10285:606..1160+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10285:606..1160+ >mRNA_P-wetherbeei_contig10285.1.1 ID=mRNA_P-wetherbeei_contig10285.1.1|Name=mRNA_P-wetherbeei_contig10285.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=273bp|location=Sequence derived from alignment at P-wetherbeei_contig10285:606..1160+ (Phaeothamnion wetherbeei SAG_119_79)back to top |