mRNA_P-wetherbeei_contig13441.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13441.1.1 vs. uniprot
Match: A0A836CCY2_9STRA (NADH-ubiquinone oxidoreductase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCY2_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 7.870e-15 Identity = 40/78 (51.28%), Postives = 51/78 (65.38%), Query Frame = 1
Query: 1 MSSGYGVRGSVGRCYHVYSNFMECVVSQGVQRQQTVRAECVDHRDDYLECLHHRKEYERHQKIQEQKRKNAEELANGN 234
MSSG+GVRG VGRCY ++S +C+ Q R +C D RDDY ECLHH KE++R + I EQ+ KNAE L + N
Sbjct: 1 MSSGFGVRGGVGRCYPIFSALNQCIA------QADNREDCSDFRDDYFECLHHFKEFQRAKVINEQQAKNAEILKHNN 72
BLAST of mRNA_P-wetherbeei_contig13441.1.1 vs. uniprot
Match: A0A7S3V495_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V495_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 7.480e-13 Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 1
Query: 1 MSSGYGVRGSVGRCYHVYSNFMECVVSQGVQRQQTVRAECVDHRDDYLECLHHRKEYERHQKIQEQKRKN 210
MSSGYG+RG +GRCY ++ + EC+ ++ + +C D R+DY ECLHHRKEYER I+EQ + N
Sbjct: 31 MSSGYGIRGGIGRCYPFFAGYKECLKTETT----STGLDCKDFREDYFECLHHRKEYERIDTIKEQAKLN 96
BLAST of mRNA_P-wetherbeei_contig13441.1.1 vs. uniprot
Match: R7QEA4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEA4_CHOCR) HSP 1 Score: 66.2 bits (160), Expect = 4.320e-11 Identity = 31/70 (44.29%), Postives = 46/70 (65.71%), Query Frame = 1
Query: 1 MSSGYGVRGSVGRCYHVYSNFMECVVSQGVQRQQTVRAECVDHRDDYLECLHHRKEYERHQKIQEQKRKN 210
M+SG+G+ G GRCY + +F +C+ + A+C R+DY+ECLHHRKE ER Q+I++Q +KN
Sbjct: 1 MASGFGINGGPGRCYSFWLDFTKCLADAAIP------ADCAPAREDYIECLHHRKESERRQQIEKQAQKN 64
BLAST of mRNA_P-wetherbeei_contig13441.1.1 vs. uniprot
Match: A9RD10_PHYPA (Predicted protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9RD10_PHYPA) HSP 1 Score: 65.1 bits (157), Expect = 1.100e-10 Identity = 32/71 (45.07%), Postives = 44/71 (61.97%), Query Frame = 1
Query: 1 MSSGYGVRGSVGRCYHVYSNFMECVVSQGVQRQQTVRAECVDHRDDYLECLHHRKEYERHQKIQEQKRKNA 213
M+SG+GV G GRCY V+ +F +C+ ++ AEC RDDY ECLHHRKEY R I +++ + A
Sbjct: 1 MASGFGVTGKKGRCYDVWMDFSDCM------SHCSMPAECTSRRDDYFECLHHRKEYSRMNAINKERERQA 65
BLAST of mRNA_P-wetherbeei_contig13441.1.1 vs. uniprot
Match: A0A7I4A4F7_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4A4F7_PHYPA) HSP 1 Score: 65.1 bits (157), Expect = 1.320e-10 Identity = 32/71 (45.07%), Postives = 44/71 (61.97%), Query Frame = 1
Query: 1 MSSGYGVRGSVGRCYHVYSNFMECVVSQGVQRQQTVRAECVDHRDDYLECLHHRKEYERHQKIQEQKRKNA 213
M+SG+GV G GRCY V+ +F +C+ ++ AEC RDDY ECLHHRKEY R I +++ + A
Sbjct: 1 MASGFGVTGKKGRCYDVWMDFSDCM------SHCSMPAECTSRRDDYFECLHHRKEYSRMNAINKERERQA 65
BLAST of mRNA_P-wetherbeei_contig13441.1.1 vs. uniprot
Match: A4S5C5_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S5C5_OSTLU) HSP 1 Score: 65.1 bits (157), Expect = 1.610e-10 Identity = 33/76 (43.42%), Postives = 48/76 (63.16%), Query Frame = 1
Query: 1 MSSGYGVRGSVGRCYHVYSNFMECVVSQGVQRQQTVRAECVDHRDDYLECLHHRKEYERHQKIQEQKRKNAEELAN 228
M+SG+G RGS GRC V+ F +CV + R+ C R+DY+ECLHH+KEY R +I+ ++++ EE AN
Sbjct: 1 MASGFGARGSEGRCAPVWREFTKCV------NEADDRSACFKFREDYVECLHHKKEYRRENEIENERQRRNEEHAN 70
BLAST of mRNA_P-wetherbeei_contig13441.1.1 vs. uniprot
Match: A0A1C7NTF1_9FUNG (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-A n=2 Tax=Mucorineae TaxID=1344963 RepID=A0A1C7NTF1_9FUNG) HSP 1 Score: 64.7 bits (156), Expect = 2.620e-10 Identity = 32/75 (42.67%), Postives = 48/75 (64.00%), Query Frame = 1
Query: 1 MSSGYGVRGSVGRCYHVYSNFMECVVSQGVQRQQTVRAECVDHRDDYLECLHHRKEYERHQKIQEQKRKNAEELA 225
M+SG+G+ G GRC+H + F +C S + +Q C+D RDDYLECLHH KE+ R +I+ ++ K A++ A
Sbjct: 1 MASGFGLDGGRGRCFHFWQEFNKCYASADLPQQ------CLDQRDDYLECLHHTKEFARITRIKTEELKQAQKKA 69
BLAST of mRNA_P-wetherbeei_contig13441.1.1 vs. uniprot
Match: A0A8H7VVW7_9FUNG (Uncharacterized protein n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7VVW7_9FUNG) HSP 1 Score: 64.7 bits (156), Expect = 2.620e-10 Identity = 32/72 (44.44%), Postives = 46/72 (63.89%), Query Frame = 1
Query: 1 MSSGYGVRGSVGRCYHVYSNFMECVVSQGVQRQQTVRAECVDHRDDYLECLHHRKEYERHQKIQEQKRKNAE 216
M+SG+G+ G GRC+H + F +C S + +Q C+D RDDYLECLHH KE+ R +I+ ++ K AE
Sbjct: 1 MASGFGLDGGRGRCFHFWQEFNKCYASADLPQQ------CLDQRDDYLECLHHTKEFARITRIKTEELKQAE 66
BLAST of mRNA_P-wetherbeei_contig13441.1.1 vs. uniprot
Match: A0A0B7MYE7_9FUNG (Uncharacterized protein n=7 Tax=Mucoraceae TaxID=34489 RepID=A0A0B7MYE7_9FUNG) HSP 1 Score: 63.5 bits (153), Expect = 7.380e-10 Identity = 31/72 (43.06%), Postives = 46/72 (63.89%), Query Frame = 1
Query: 1 MSSGYGVRGSVGRCYHVYSNFMECVVSQGVQRQQTVRAECVDHRDDYLECLHHRKEYERHQKIQEQKRKNAE 216
M+SG+G+ G GRC+H + F +C + + +Q C+D RDDYLECLHH KE+ R +I+ ++ K AE
Sbjct: 1 MASGFGLDGGRGRCFHFWQEFNKCYATADLPQQ------CLDQRDDYLECLHHTKEFARITRIKTEELKQAE 66
BLAST of mRNA_P-wetherbeei_contig13441.1.1 vs. uniprot
Match: A0A176WFV0_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WFV0_MARPO) HSP 1 Score: 62.8 bits (151), Expect = 8.380e-10 Identity = 35/86 (40.70%), Postives = 47/86 (54.65%), Query Frame = 1
Query: 1 MSSGYGVRGSVGRCYHVYSNFMECVVSQGVQRQQTVRAECVDHRDDYLECLHHRKEYERHQKIQEQKRKNAEELANGN-----GHH 243
M+SG+G+ G GRCY + +F EC+ + V +C RDDY ECLHHRKEY R I ++K + A +G GHH
Sbjct: 1 MASGFGIHGGKGRCYDTWMDFSECM------SRCAVPGDCAALRDDYFECLHHRKEYSRINAINKEKERQAALHKDGGKDQKAGHH 80 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13441.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13441.1.1 >prot_P-wetherbeei_contig13441.1.1 ID=prot_P-wetherbeei_contig13441.1.1|Name=mRNA_P-wetherbeei_contig13441.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=82bp MSSGYGVRGSVGRCYHVYSNFMECVVSQGVQRQQTVRAECVDHRDDYLECback to top mRNA from alignment at P-wetherbeei_contig13441:666..1597- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13441.1.1 ID=mRNA_P-wetherbeei_contig13441.1.1|Name=mRNA_P-wetherbeei_contig13441.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=932bp|location=Sequence derived from alignment at P-wetherbeei_contig13441:666..1597- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13441:666..1597- >mRNA_P-wetherbeei_contig13441.1.1 ID=mRNA_P-wetherbeei_contig13441.1.1|Name=mRNA_P-wetherbeei_contig13441.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=246bp|location=Sequence derived from alignment at P-wetherbeei_contig13441:666..1597- (Phaeothamnion wetherbeei SAG_119_79)back to top |