mRNA_P-wetherbeei_contig13440.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13440.1.1 vs. uniprot
Match: A0A836CLI0_9STRA (ABC transporter related n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLI0_9STRA) HSP 1 Score: 225 bits (574), Expect = 4.180e-67 Identity = 111/169 (65.68%), Postives = 140/169 (82.84%), Query Frame = 1
Query: 4 QEPVFAPGATVLDVIYSADNPLMRAVRDYQEASEALTEDPSSAAAAAKFDAAMGAMETVGGWDADTFAQQVMSRLRVSSLQRQAVDALSGGERKRVALAAALIQKPDVLLLDEPTNHLDVEAIEWLEDLLADRSLTCLVVTHDRYFLENISNEILELEDGVLHRYAGSY 510
QEPVF PGATVL+ +Y+++ P+MR +R+Y+EA+ A+TE P AAA +F+ AM AME WDA+ A Q+MSRLRV L+ Q+VD LSGGE+KRVALAAAL+Q PDVLLLDEPTNHLDVEAIEWLEDLL+DR+LT ++VTHDR+FLEN+ EILEL+ G+++RY GSY
Sbjct: 90 QEPVFPPGATVLEAVYASEAPMMRTLREYEEATAAVTEHPEDAAANTRFERAMAAMERENAWDAEGRAAQIMSRLRVDGLRAQSVDRLSGGEKKRVALAAALVQAPDVLLLDEPTNHLDVEAIEWLEDLLSDRALTFVLVTHDRWFLENVCQEILELDTGLMYRYPGSY 258
BLAST of mRNA_P-wetherbeei_contig13440.1.1 vs. uniprot
Match: A0A6H5JCS1_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCS1_9PHAE) HSP 1 Score: 212 bits (539), Expect = 1.660e-61 Identity = 113/175 (64.57%), Postives = 135/175 (77.14%), Query Frame = 1
Query: 4 QEPVFAPGATVLDVIYSADNPLMRAVRDYQEASEALT---EDPSSAAAAA-KFDAAMGAMETVGGWDADTFAQQVMSRLRVSSLQRQAVDALSGGERKRVALAAALIQKPDVLLLDEPTNHLDVEAIEWLEDLLADRSLTCLVVTHDRYFLENISNEILELEDGVLHRYAGSYDR 516
Q+P F G+TV D +Y ADNPLMRAVR YQ+A+EA+ DP + A +F+ A M+ VGGWD +T+AQQVMSRL V SL+ V LSGG+RKRVALAAAL+QKPDVLLLDEPTNHLDVEAIEWLE LLA+RSLT + VTHDRYFLEN+ EI+EL+ L+RY GSY+R
Sbjct: 169 QDPEFPAGSTVKDAVYGADNPLMRAVRAYQQATEAIEGAGADPDALEKAMDRFEKATATMDRVGGWDVETYAQQVMSRLGVMSLEGSQVVNLSGGQRKRVALAAALVQKPDVLLLDEPTNHLDVEAIEWLERLLAERSLTFVCVTHDRYFLENVCQEIIELDTAKLYRYPGSYER 343
BLAST of mRNA_P-wetherbeei_contig13440.1.1 vs. uniprot
Match: W7TJ57_9STRA (Abc transporter atp-binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ57_9STRA) HSP 1 Score: 172 bits (437), Expect = 3.420e-47 Identity = 92/172 (53.49%), Postives = 123/172 (71.51%), Query Frame = 1
Query: 4 QEPVFAPGATVLDVIYS-ADNPLMRAVRDYQEASEALTEDPSSAAAAAKFDAAMGAMETVGGWDADTFAQQVMSRLRVSSLQRQAVDALSGGERKRVALAAALIQKPDVLLLDEPTNHLDVEAIEWLEDLLADRSLTCLVVTHDRYFLENI-SNEILELEDGVLHRYAGSYD 513
QEP F PG V DV++S + +P M AV YQ+ASEAL A KF A M+ GGW+A+T A Q+ ++L V LQ + VD LSGG+RKR+ LA AL++KPDV+LLDEP+NHLD++AIEWLE LA+R++T +VVTHDRYFLE + +E+ ELED L+R+ G+Y+
Sbjct: 132 QEPTFPPGLKVKDVMFSPSGSPAMAAVWAYQKASEALATGTEEAYD--KFQEASQRMDVTGGWEAETIANQIFTQLNVVDLQDKDVDTLSGGQRKRLGLATALVRKPDVILLDEPSNHLDIDAIEWLEAHLANRAVTAIVVTHDRYFLETVCQSEVWELEDAALYRHTGNYE 301
BLAST of mRNA_P-wetherbeei_contig13440.1.1 vs. uniprot
Match: A0A4D9CRB9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRB9_9STRA) HSP 1 Score: 173 bits (438), Expect = 8.060e-47 Identity = 92/172 (53.49%), Postives = 123/172 (71.51%), Query Frame = 1
Query: 4 QEPVFAPGATVLDVIYS-ADNPLMRAVRDYQEASEALTEDPSSAAAAAKFDAAMGAMETVGGWDADTFAQQVMSRLRVSSLQRQAVDALSGGERKRVALAAALIQKPDVLLLDEPTNHLDVEAIEWLEDLLADRSLTCLVVTHDRYFLENI-SNEILELEDGVLHRYAGSYD 513
QEP F PG V DV++S + +P M AV YQ+ASEAL A KF A M+ GGW+A+T A Q+ ++L V LQ + VD LSGG+RKR+ LA AL++KPDV+LLDEP+NHLD++AIEWLE LA+R++T +VVTHDRYFLE + +E+ ELED L+R+ G+Y+
Sbjct: 643 QEPTFTPGLKVKDVMFSPSGSPAMAAVWAYQKASEALATGTEEAYD--KFQEASQRMDVTGGWEAETIANQIFTQLNVVDLQDKDVDTLSGGQRKRLGLATALVRKPDVILLDEPSNHLDIDAIEWLEAHLANRAVTAIVVTHDRYFLETVCQSEVWELEDAALYRHTGNYE 812
BLAST of mRNA_P-wetherbeei_contig13440.1.1 vs. uniprot
Match: A0A7S3Y1P4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P4_HETAK) HSP 1 Score: 168 bits (425), Expect = 2.290e-45 Identity = 85/172 (49.42%), Postives = 119/172 (69.19%), Query Frame = 1
Query: 4 QEPVFAPGATVLDVIYSADNPLMRAVRDYQEASEALTEDPSSAAAAAKFDAAMGAMETVGGWDADTFAQQVMSRLRVSSLQRQAVDALSGGERKRVALAAALIQKPDVLLLDEPTNHLDVEAIEWLEDLL-ADRSLTCLVVTHDRYFLENISNEILELEDGVLHRYAGSYDR 516
QEP F G TV + ++ +D P+M A+R Y E S L + + F+ A +E++GGW+ + ++S+L V L Q VD LSGGE KR+AL L++KPDVLLLDEPTNHLDVEAIEW+EDL+ A++ + CLVVTHDR FLEN+++EI+EL+ L+RY G+Y++
Sbjct: 184 QEPKFEQGKTVKEAVFESDIPVMVALRKYYELSARLESGDTDPSTQKAFEKATEKVESLGGWEVEATVATILSKLNVYHLMDQKVDGLSGGELKRLALGIGLVEKPDVLLLDEPTNHLDVEAIEWVEDLVRANKDMACLVVTHDRLFLENVADEIVELDRAQLYRYPGAYNK 355
BLAST of mRNA_P-wetherbeei_contig13440.1.1 vs. uniprot
Match: UPI001B1D3E7C (ATP-binding cassette domain-containing protein n=1 Tax=Paenibacillus sp. J31TS4 TaxID=2807195 RepID=UPI001B1D3E7C) HSP 1 Score: 166 bits (420), Expect = 4.910e-45 Identity = 85/169 (50.30%), Postives = 115/169 (68.05%), Query Frame = 1
Query: 4 QEPVFAPGATVLDVIYSADNPLMRAVRDYQEASEALTEDPSSAAAAAKFDAAMGAMETVGGWDADTFAQQVMSRLRVSSLQRQAVDALSGGERKRVALAAALIQKPDVLLLDEPTNHLDVEAIEWLEDLLADRSLTCLVVTHDRYFLENISNEILELEDGVLHRYAGSY 510
Q P F PG TVLD ++ AD P+MRAVRDY+ A L DP + AK A M+T+G W+A T A+ ++S+L + + + A LSGG+RKRVALAAAL+ D+L+LDEPTNH+D E +EWLE+ L+ L+VTHDRYFL+ ++N ILEL+ G L+ Y G+Y
Sbjct: 73 QSPEFEPGTTVLDYLFQADTPVMRAVRDYELALHELERDPDNGRKQAKLFEAQSRMDTLGAWEASTQAKTILSKLGIDAFAQDA-SLLSGGQRKRVALAAALLHPADLLILDEPTNHIDNETVEWLEEYLSRYRGALLLVTHDRYFLDRVANRILELDRGKLYSYDGNY 240
BLAST of mRNA_P-wetherbeei_contig13440.1.1 vs. uniprot
Match: A0A2N3A5V1_9BACT (ABC transporter n=2 Tax=unclassified Bacteroidetes TaxID=37452 RepID=A0A2N3A5V1_9BACT) HSP 1 Score: 161 bits (408), Expect = 1.880e-43 Identity = 81/169 (47.93%), Postives = 121/169 (71.60%), Query Frame = 1
Query: 4 QEPVFAPGATVLDVIYSADNPLMRAVRDYQEASEALTEDPSSAAAAAKFDAAMGAMETVGGWDADTFAQQVMSRLRVSSLQRQAVDALSGGERKRVALAAALIQKPDVLLLDEPTNHLDVEAIEWLEDLLADRSLTCLVVTHDRYFLENISNEILELEDGVLHRYAGSY 510
Q P TV D++++A+N MRA+RDY+ + L D S A + A AME V GWD D ++++SR +++ L ++A + LSGG+RK+V+LA AL+++ D+L+LDEPTNHLD+E IEWLED L+ ++L+ LVVTHDRYFL+N+ NEILE+++ ++RY G+Y
Sbjct: 73 QNPEMQDDQTVFDILFNAENEFMRAIRDYEFSINRLKADDSPDAHK-MLEIATNAMERVNGWDYDVRIKEILSRFKITDLDQKAGE-LSGGQRKKVSLAKALLEETDLLILDEPTNHLDIEMIEWLEDYLSRQNLSLLVVTHDRYFLDNVCNEILEMDNNRIYRYKGNY 239
BLAST of mRNA_P-wetherbeei_contig13440.1.1 vs. uniprot
Match: A0A7H5F1E1_9BACT (ATP-binding cassette domain-containing protein n=1 Tax=Lewinella sp. W8 TaxID=2528208 RepID=A0A7H5F1E1_9BACT) HSP 1 Score: 159 bits (402), Expect = 1.310e-42 Identity = 80/171 (46.78%), Postives = 118/171 (69.01%), Query Frame = 1
Query: 4 QEPVFAPGATVLDVIYSADNPLMRAVRDYQEASEALTEDPSSAAAAAKFDAAMGAMETVGGWDADTFAQQVMSRLRVSSLQRQAVDALSGGERKRVALAAALIQKPDVLLLDEPTNHLDVEAIEWLEDLLADRSLTCLVVTHDRYFLENISNEILELEDGVLHRYAGSYDR 516
QEP F A+VLD ++ +DN ++RAVRDY+EA T++P AK A+ M+ + WD + ++V+S+L + + Q +D LSGG+RKRVALA +I +PD++++DEPTNHLD+E IEWLE+ L +LT L+VTHDRYFLE + N I+EL+ G ++ Y G+Y +
Sbjct: 75 QEPDFGDNASVLDAVFDSDNDMVRAVRDYEEALSR-TDEP------AKLQDALTRMDRLRAWDIEARIKEVLSKLNIDDVH-QKIDTLSGGQRKRVALAKLIIDEPDLIIMDEPTNHLDLEMIEWLEEWLQSPNLTLLMVTHDRYFLERVCNRIIELDGGNIYHYTGNYSQ 237
BLAST of mRNA_P-wetherbeei_contig13440.1.1 vs. uniprot
Match: A0A2S6I6Q6_9BACT (ATP-binding cassette subfamily F protein uup n=2 Tax=Lewinella TaxID=70994 RepID=A0A2S6I6Q6_9BACT) HSP 1 Score: 158 bits (400), Expect = 2.380e-42 Identity = 81/169 (47.93%), Postives = 117/169 (69.23%), Query Frame = 1
Query: 4 QEPVFAPGATVLDVIYSADNPLMRAVRDYQEASEALTEDPSSAAAAAKFDAAMGAMETVGGWDADTFAQQVMSRLRVSSLQRQAVDALSGGERKRVALAAALIQKPDVLLLDEPTNHLDVEAIEWLEDLLADRSLTCLVVTHDRYFLENISNEILELEDGVLHRYAGSY 510
QEP F GATV+D +Y +DN L+RAVRDY+EA T+ P+ A+ M+ + WD + ++V+S+L + ++ +Q V LSGG+RKRVALA +I +PD++++DEPTNHLD++ IEWLE+ L +LT L+VTHDRYFLE + N I+ELE G ++ Y G+Y
Sbjct: 75 QEPDFGEGATVMDAVYDSDNELVRAVRDYEEALSR-TDKPNL------LQDALTRMDRLQAWDIEARIKEVLSKLNIENVNQQ-VATLSGGQRKRVALAKLIIDEPDLIIMDEPTNHLDMDMIEWLEEWLQSPNLTLLMVTHDRYFLERVCNRIIELEGGNIYHYTGNY 235
BLAST of mRNA_P-wetherbeei_contig13440.1.1 vs. uniprot
Match: UPI000347C33C (ABC-F family ATP-binding cassette domain-containing protein n=1 Tax=Nafulsella turpanensis TaxID=1265690 RepID=UPI000347C33C) HSP 1 Score: 158 bits (400), Expect = 2.650e-42 Identity = 83/169 (49.11%), Postives = 111/169 (65.68%), Query Frame = 1
Query: 4 QEPVFAPGATVLDVIYSADNPLMRAVRDYQEASEALTEDPSSAAAAAKFDAAMGAMETVGGWDADTFAQQVMSRLRVSSLQRQAVDALSGGERKRVALAAALIQKPDVLLLDEPTNHLDVEAIEWLEDLLADRSLTCLVVTHDRYFLENISNEILELEDGVLHRYAGSY 510
Q P F G TV + ++ NPL+ V DY+ DP AAA K + AME WD ++ Q++ +L V L+ Q VD +SGG++KRVA+A LI+KPD L+LDEPTNHLD+E IEWLED LA LT L+VTHDRYFLE ++NEI+E++ G L++Y G+Y
Sbjct: 73 QNPQFREGDTVKEAVFDRQNPLLALVSDYEYYLHKSETDP---AAAEKLQELLPAMEEQNAWDYESQVTQILGKLGVYDLE-QRVDKMSGGQKKRVAMAKTLIEKPDFLILDEPTNHLDLETIEWLEDYLAKAQLTLLMVTHDRYFLERVTNEIIEIDGGKLYKYKGNY 237 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13440.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13440.1.1 >prot_P-wetherbeei_contig13440.1.1 ID=prot_P-wetherbeei_contig13440.1.1|Name=mRNA_P-wetherbeei_contig13440.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=172bp MQEPVFAPGATVLDVIYSADNPLMRAVRDYQEASEALTEDPSSAAAAAKFback to top mRNA from alignment at P-wetherbeei_contig13440:13..1838+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13440.1.1 ID=mRNA_P-wetherbeei_contig13440.1.1|Name=mRNA_P-wetherbeei_contig13440.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1826bp|location=Sequence derived from alignment at P-wetherbeei_contig13440:13..1838+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13440:13..1838+ >mRNA_P-wetherbeei_contig13440.1.1 ID=mRNA_P-wetherbeei_contig13440.1.1|Name=mRNA_P-wetherbeei_contig13440.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=516bp|location=Sequence derived from alignment at P-wetherbeei_contig13440:13..1838+ (Phaeothamnion wetherbeei SAG_119_79)back to top |