mRNA_P-wetherbeei_contig13428.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13428.1.1
Unique NamemRNA_P-wetherbeei_contig13428.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13428.1.1 vs. uniprot
Match: D7FWD4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD4_ECTSI)

HSP 1 Score: 357 bits (917), Expect = 3.440e-123
Identity = 172/221 (77.83%), Postives = 203/221 (91.86%), Query Frame = 1
Query:    1 VPKTLEERCEGRRVIVVLVKASLETVRTKKGDFELLNCDDHRSLVTKKSGKDPADLRPDILHQELLALLDSPLNKEGRLQVYVHTSNNVLIEVSPQVRIPRTFKRFSGLMVQLLHKLKIRAAGSSTMLLRVVKNPVTRHLPPGARVYGMSATGTLYSPVSFASQLPEDAPVVFYVGAMASGHVTVEEHPEIEQMIAVSAHPLSGAAAITRLFAGIEHHWGI 663
            VP TL+ER +GRRVIV+L +ASLETV+TKKGDF+LLNCDDHR LVTKKSGKDP DLRPDI+HQELLALLDSPLNK G+LQVY+ T+ NVLIEV+PQ+RIPRTFKRFSGLMVQLLHKLKIRAAG+STMLL+VVKNP TRHLPPG++ +G+S  GTLY+P  FA+ LP+DAP+VFY+GAMASGH+T +E+PEIE+MIA+S +PLSGAAAI+RLF GIE+HWGI
Sbjct:   17 VPATLDERSQGRRVIVILKRASLETVKTKKGDFQLLNCDDHRRLVTKKSGKDPKDLRPDIVHQELLALLDSPLNKAGKLQVYILTTLNVLIEVNPQIRIPRTFKRFSGLMVQLLHKLKIRAAGNSTMLLKVVKNPPTRHLPPGSKTFGLSVEGTLYNPNHFAATLPDDAPIVFYIGAMASGHLTKDENPEIEEMIAISEYPLSGAAAISRLFGGIENHWGI 237          
BLAST of mRNA_P-wetherbeei_contig13428.1.1 vs. uniprot
Match: A0A836CMU2_9STRA (Alpha/beta knot methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMU2_9STRA)

HSP 1 Score: 357 bits (915), Expect = 5.230e-123
Identity = 171/221 (77.38%), Postives = 196/221 (88.69%), Query Frame = 1
Query:    4 PKTLEERCEGRRVIVVLVKASLETVRTKKGDFELLNCDDHRSLVTKKSGKDPADLRPDILHQELLALLDSPLNKEGRLQVYVHTSNNVLIEVSPQVRIPRTFKRFSGLMVQLLHKLKIRAAGSSTMLLRVVKNPVTRHLPPGARVYGMSATGTLYSPVSFASQLPEDAPVVFYVGAMASGHVTVEEHPEIEQMIAVSAHPLSGAAAITRLFAGIEHHWGIV 666
            PKTLEE+CEGRRV+VVL +ASLETV+T++G+F+LLNCDDH+SL+TKKSGKDPADLRPDI+HQELLALLDSPLNK GRLQVYVHT   VL+EVSPQ RIPRTFKRFSGLMVQLLHKLKIRAA S+  LLRVVKNPVTRHLP GAR+YGMS  GTLY+P  FA+QLPED P+V YVGAMA GH+T+ +HPE+E+MI+VS +PLSGAAAI R+   IE  WGIV
Sbjct:   10 PKTLEEKCEGRRVVVVLWRASLETVKTRRGEFQLLNCDDHKSLITKKSGKDPADLRPDIVHQELLALLDSPLNKAGRLQVYVHTGKGVLVEVSPQTRIPRTFKRFSGLMVQLLHKLKIRAANSNATLLRVVKNPVTRHLPAGARIYGMSVVGTLYNPRLFAAQLPEDVPIVLYVGAMAQGHLTIADHPEVEEMISVSEYPLSGAAAIARVLGAIESEWGIV 230          
BLAST of mRNA_P-wetherbeei_contig13428.1.1 vs. uniprot
Match: A0A6U0WJW5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0WJW5_9STRA)

HSP 1 Score: 303 bits (775), Expect = 9.670e-101
Identity = 147/211 (69.67%), Postives = 178/211 (84.36%), Query Frame = 1
Query:   34 RRVIVVLVKASLETVRTKKGDFELLNCDDHRSLVTKKSGKDPADLRPDILHQELLALLDSPLNKEGRLQVYVHTSNNVLIEVSPQVRIPRTFKRFSGLMVQLLHKLKIRAAGSSTMLLRVVKNPVTRHLPPGARVYGMSATGTLYSPVSFASQLPEDAPVVFYVGAMASGHVTVEEHPEIEQMIAVSAHPLSGAAAITRLFAGIEHHWGIV 666
            +RVIVVL KASLETVRTKKGD++LLN DDHR + T+   ++P D RPDILHQEL+ALLDSPLNK G+LQVY+ T+ NVLIEV+P+ RIPRTFKRFS LMVQLLHKLKIR+A    MLLRV+KNPVTRHLP GA +YG+S TG LY+P  FAS LP+DAP+VF +GAM++GH+T+ +HP IE+MI++S +PLSGA AI RL  GIE+HWGIV
Sbjct:   86 QRVIVVLDKASLETVRTKKGDYQLLNADDHRRIATQND-RNPRDYRPDILHQELMALLDSPLNKAGKLQVYIKTTANVLIEVNPKTRIPRTFKRFSALMVQLLHKLKIRSADGKDMLLRVIKNPVTRHLPAGAHIYGLSCTGELYNPHHFASALPDDAPIVFIIGAMSTGHITLNDHPYIEEMISISEYPLSGATAINRLVGGIENHWGIV 295          
BLAST of mRNA_P-wetherbeei_contig13428.1.1 vs. uniprot
Match: A0A7S2WTR9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTR9_9STRA)

HSP 1 Score: 283 bits (724), Expect = 8.870e-94
Identity = 135/212 (63.68%), Postives = 168/212 (79.25%), Query Frame = 1
Query:   31 GRRVIVVLVKASLETVRTKKGDFELLNCDDHRSLVTKKSGKDPADLRPDILHQELLALLDSPLNKEGRLQVYVHTSNNVLIEVSPQVRIPRTFKRFSGLMVQLLHKLKIRAAGSSTMLLRVVKNPVTRHLPPGARVYGMSATGTLYSPVSFASQLPEDAPVVFYVGAMASGHVTVEEHPEIEQMIAVSAHPLSGAAAITRLFAGIEHHWGIV 666
             R++IV+L  ASLET +TK+GD+ELLNCDDHR +  KK G DPA+ RPDILHQELLAL+DSPLNK G LQVY+HT  NVLIEV+P++R+PRTFKRFSGLMVQLLHK KIRA+G+S ML++V+KNP +RH+P G R +G S  GTLY P SFAS +P+D P +   GAMASG + V++HP IE M ++S +PLSGA A+ R+   IE  WGIV
Sbjct:   31 NRKIIVLLTLASLETTKTKRGDYELLNCDDHRQIA-KKYGLDPAEYRPDILHQELLALIDSPLNKAGLLQVYIHTRKNVLIEVNPKMRVPRTFKRFSGLMVQLLHKFKIRASGNSEMLMKVIKNPFSRHIPAGCRCFGFSVKGTLYKPSSFASLMPDDQPCLLVFGAMASGSIQVQDHPYIEDMASISEYPLSGACALNRICGAIESRWGIV 241          
BLAST of mRNA_P-wetherbeei_contig13428.1.1 vs. uniprot
Match: A0A7S3Q0K3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0K3_9STRA)

HSP 1 Score: 283 bits (724), Expect = 4.020e-92
Identity = 138/217 (63.59%), Postives = 173/217 (79.72%), Query Frame = 1
Query:   34 RRVIVVLVKASLETVRTKKGDFELLNCDDHRSLVTKKSGKDPADLRPDILHQELLALLDSPLNKEGRLQVYVHTSNNVLIEVSPQVRIPRTFKRFSGLMVQLLHKLKIRAAGSSTMLLRVVKNPVTRHLPPGARVYGMSATGTLYSPVSFASQLPEDA------PVVFYVGAMASGHVTVEEHPEIEQMIAVSAHPLSGAAAITRLFAGIEHHWGIV 666
            +++I++L +A LETV+ +KG FELLNCDDHR L  KK  +DP + RPDI HQELLAL+DSPLNK G LQVY  T+ NVL+EV+P +RIPRT+KRFSGLMVQLLHK+KI+A  +ST L++V+K P ++HLPPGARVYGMS  GTLYSP   A+ L  D       PVVF +GAMA+GH+TVE+HP IE+MI+VS +PLSGAAAI+R+  GIE+ WGIV
Sbjct:  142 QKIIILLDQARLETVKNRKGLFELLNCDDHRDLCKKKLKRDPKEFRPDIAHQELLALIDSPLNKSGSLQVYFRTNKNVLVEVNPSIRIPRTYKRFSGLMVQLLHKMKIKAGNTSTTLMKVIKGPFSQHLPPGARVYGMSCQGTLYSPNGLATALIPDEQTSDSPPVVFVIGAMAAGHITVEDHPYIEKMISVSEYPLSGAAAISRILGGIENQWGIV 358          
BLAST of mRNA_P-wetherbeei_contig13428.1.1 vs. uniprot
Match: A0A4D9DCH5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCH5_9STRA)

HSP 1 Score: 278 bits (711), Expect = 5.230e-92
Identity = 139/217 (64.06%), Postives = 175/217 (80.65%), Query Frame = 1
Query:   19 ERCEGRRVI-VVLVKASLETVRTKKGDFELLNCDDHRSLVTKKSGKDPADLRPDILHQELLALLDSPLNKEGRLQVYVHTSNNVLIEVSPQVRIPRTFKRFSGLMVQLLHKLKIRAAGSSTMLLRVVKNPVTRHLPPGARVYGMSATGTLYSPVSFASQLPEDAPVVFYVGAMASGHVTVEEHPEIEQMIAVSAHPLSGAAAITRLFAGIEHHWGIV 666
            E    + VI VVL KASLETV+ K G + LLNCDDH++++ KKSGK+PAD RPDILHQELLALLDSPLNK G+L+VY+ +S+NVLIEV+ + RIPRT+KRF+GLMVQLLHKLK+R+A     LL+V+KNPVTR+LP G + YG S  GTLY+P + A  LP+D PVVF +GAMA+GH+TV++HP IE+M++VS  PLSGA AI RL   IE++WGIV
Sbjct:   12 ESLRNKEVITVVLDKASLETVKMKSGQYCLLNCDDHQAMM-KKSGKNPADYRPDILHQELLALLDSPLNKVGKLKVYIRSSSNVLIEVNAKCRIPRTYKRFAGLMVQLLHKLKVRSADGKATLLKVIKNPVTRYLPAGFKCYGFSVQGTLYNPNALACTLPDDKPVVFVLGAMAAGHITVQDHPYIEEMVSVSDFPLSGATAINRLLGAIENYWGIV 227          
BLAST of mRNA_P-wetherbeei_contig13428.1.1 vs. uniprot
Match: A0A7R9W9I7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W9I7_9STRA)

HSP 1 Score: 278 bits (710), Expect = 2.740e-91
Identity = 139/219 (63.47%), Postives = 173/219 (79.00%), Query Frame = 1
Query:   34 RRVIVVLVKASLETVRTKKGDFELLNCDDHRSLVTKKSGKDPADLRPDILHQELLALLDSPLNKEGRLQVYVHTSNNVLIEVSPQVRIPRTFKRFSGLMVQLLHKLKIRAAGSSTMLLRVVKNPVTRHLPPGARVYGMSATGTLYSPVSFASQL-PEDA-------PVVFYVGAMASGHVTVEEHPEIEQMIAVSAHPLSGAAAITRLFAGIEHHWGIV 666
            +++IV+L +A LETV+ K+G FELLNCDDHR L  +K  KDP D RPDI HQE+LALLDSPLNK G LQVY+ T  NVLIE++P +RIPRT+KRFSGL+VQLLHK+KI+A GSS  L++V+KNP ++HLP G RV+GMS  GTLYSP + A+ L P D        PV F VGAMA+GHVTVE+HP IE+M +VS +PLSGAAAI+R+  GIE++WGIV
Sbjct:   48 KQIIVLLDQARLETVKNKRGIFELLNCDDHRELCKRKLKKDPKDFRPDICHQEMLALLDSPLNKAGCLQVYIKTCKNVLIEINPSIRIPRTYKRFSGLIVQLLHKMKIKAGGSSETLMKVIKNPFSQHLPAGTRVFGMSCQGTLYSPNALAAALVPPDPSAASGAPPVCFIVGAMATGHVTVEDHPYIEKMFSVSEYPLSGAAAISRILGGIENYWGIV 266          
BLAST of mRNA_P-wetherbeei_contig13428.1.1 vs. uniprot
Match: A0A6S8XKM1_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8XKM1_9STRA)

HSP 1 Score: 276 bits (707), Expect = 1.960e-90
Identity = 135/217 (62.21%), Postives = 172/217 (79.26%), Query Frame = 1
Query:   34 RRVIVVLVKASLETVRTKKGDFELLNCDDHRSLVTKKSGKDPADLRPDILHQELLALLDSPLNKEGRLQVYVHTSNNVLIEVSPQVRIPRTFKRFSGLMVQLLHKLKIRAAGSSTMLLRVVKNPVTRHLPPGARVYGMSATGTLYSPVSFASQL----PE--DAPVVFYVGAMASGHVTVEEHPEIEQMIAVSAHPLSGAAAITRLFAGIEHHWGIV 666
            +++IV+L  A LETV+ ++  +ELLNCDDHR L T+K  KDP   RPDI HQELLAL+DSPLNK G LQVY+ T++NVL+E+ P +RIPRT+KRFSGLMVQLLHK+KI+A+GSST L++V+KNP +RHLP G RVYGMS  G LYSP+S A  +    PE  D PV F +GAMA+GH+T ++HP IE+M +VS +PLSGAAAI+R+  GIE+ WGIV
Sbjct:   78 KKIIVLLDLARLETVKNRRDTYELLNCDDHRDLCTRKLKKDPKQYRPDICHQELLALIDSPLNKAGCLQVYIKTTSNVLVEIHPSIRIPRTYKRFSGLMVQLLHKMKIKASGSSTTLMKVIKNPFSRHLPAGTRVYGMSVGGKLYSPMSLAQAVLSDDPEGDDPPVCFIIGAMAAGHITKDDHPYIEEMFSVSEYPLSGAAAISRILGGIENRWGIV 294          
BLAST of mRNA_P-wetherbeei_contig13428.1.1 vs. uniprot
Match: B8CAA0_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAA0_THAPS)

HSP 1 Score: 272 bits (696), Expect = 7.360e-90
Identity = 129/218 (59.17%), Postives = 168/218 (77.06%), Query Frame = 1
Query:   31 GRRVIVVLVKASLETVRTKKGDFELLNCDDHRSLVTKKSGKDPADLRPDILHQELLALLDSPLNKEGRLQVYVHTSNNVLIEVSPQVRIPRTFKRFSGLMVQLLHKLKIRAAGSSTMLLRVVKNPVTRHLPPGARVYGMSATGTLYSPVSFASQL------PEDAPVVFYVGAMASGHVTVEEHPEIEQMIAVSAHPLSGAAAITRLFAGIEHHWGIV 666
              ++IV+L +A LET++ ++G++ELLNCDDHR +  KK  KDP + RPDI HQELLALLDSPLNK G LQ+Y+ TS NVLIE+ P VRIPRT+KRF+GLMVQLLHK+KI+A+ + T L++V+KNP+++HLP G RVYGMS  GTLYSP+  A  L        +  V F +GAMA+GHV+VE+HP IE+M ++S +PLSGA+AI R+   IEH WGIV
Sbjct:    1 SNKLIVILDQAKLETIKNRRGNYELLNCDDHRDICKKKLKKDPKEFRPDICHQELLALLDSPLNKSGHLQIYIRTSRNVLIELHPSVRIPRTYKRFAGLMVQLLHKMKIKASENGTTLMKVIKNPMSQHLPVGTRVYGMSCQGTLYSPLGLAKALIPLDPNGNEGQVCFVIGAMAAGHVSVEDHPYIEKMFSISEYPLSGASAINRILGAIEHQWGIV 218          
BLAST of mRNA_P-wetherbeei_contig13428.1.1 vs. uniprot
Match: A0A1E7FLB5_9STRA (Suppressor Mra1 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FLB5_9STRA)

HSP 1 Score: 270 bits (691), Expect = 4.090e-89
Identity = 131/217 (60.37%), Postives = 169/217 (77.88%), Query Frame = 1
Query:   40 VIVVLVKASLETVRTKKGDFELLNCDDHRSLVTKKSGKDPADLRPDILHQELLALLDSPLNKEGRLQVYVHTSNNVLIEVSPQVRIPRTFKRFSGLMVQLLHKLKIRAAGSSTMLLRVVKNPVTRHLPPGARVYGMSATGTLYSPVSFASQL----PEDA----PVVFYVGAMASGHVTVEEHPEIEQMIAVSAHPLSGAAAITRLFAGIEHHWGIV 666
            VIV+L +A+LETV+ +KG +ELLNCDDHR L  KK  KDP   RPDILHQELLALLDSPLNK G L++Y+ T+  VLIEV+P +R PRT+KRF+GLMVQLLHK+KI+A   ST LL+V+KNP++ HLPPG R +G S  G LYSP++ A  +    P+      P  F VGAM+SGHVT+++HP IE+M+++S++PLSGAAA++RL  GIEHHWG+V
Sbjct:    1 VIVLLDQATLETVKNRKGLYELLNCDDHRDLCKKKLRKDPNTFRPDILHQELLALLDSPLNKAGLLRIYISTTKKVLIEVNPTIRAPRTYKRFAGLMVQLLHKMKIKAGNDSTTLLQVIKNPLSSHLPPGTRCFGFSCEGQLYSPIALAKTVVSIEPDTTGKIPPTCFVVGAMSSGHVTIDDHPYIEKMLSISSYPLSGAAALSRLMGGIEHHWGVV 217          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13428.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWD4_ECTSI3.440e-12377.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CMU2_9STRA5.230e-12377.38Alpha/beta knot methyltransferase n=1 Tax=Tribonem... [more]
A0A6U0WJW5_9STRA9.670e-10169.67Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2WTR9_9STRA8.870e-9463.68Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3Q0K3_9STRA4.020e-9263.59Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A4D9DCH5_9STRA5.230e-9264.06Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7R9W9I7_9STRA2.740e-9163.47Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A6S8XKM1_9STRA1.960e-9062.21Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
B8CAA0_THAPS7.360e-9059.17Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A1E7FLB5_9STRA4.090e-8960.37Suppressor Mra1 (Fragment) n=1 Tax=Fragilariopsis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13428contigP-wetherbeei_contig13428:150..1373 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FWD4
Preferred nameEMG1
PFAMsEMG1
Model size669
Max annot lvl2759|Eukaryota
KEGG koko:K14568
KEGG Pathwayko03008,map03008
Hectar predicted targeting categoryother localisation
GOsGO:0000154,GO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000472,GO:0000478,GO:0000479,GO:0000480,GO:0000966,GO:0000967,GO:0001510,GO:0001701,GO:0001824,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005856,GO:0005874,GO:0005880,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006996,GO:0006997,GO:0007000,GO:0007275,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009605,GO:0009607,GO:0009617,GO:0009790,GO:0009792,GO:0009987,GO:0010467,GO:0015630,GO:0016043,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0017126,GO:0019843,GO:0022613,GO:0030490,GO:0030684,GO:0030686,GO:0031167,GO:0031974,GO:0031981,GO:0032040,GO:0032259,GO:0032501,GO:0032502,GO:0032991,GO:0034399,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0042742,GO:0043009,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044446,GO:0044464,GO:0046483,GO:0048856,GO:0050896,GO:0051704,GO:0051707,GO:0070013,GO:0070037,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0098542,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0140098,GO:0140102,GO:1901360,GO:1901363,GO:1990904
Exons4
Evalue5.63e-124
EggNOG OGsCOG1756@1|root,KOG3073@2759|Eukaryota
Ec32 ortholog descriptionAlpha/beta knot methyltransferases
Ec32 orthologEc-25_000590.1
EC2.1.1.260
Descriptionribosomal RNA small subunit methyltransferase
Cds size669
COG categoryBK
BRITEko00000,ko00001,ko01000,ko03009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185984.8582315-CDS-P-wetherbeei_contig13428:149..3261683185984.8582315-CDS-P-wetherbeei_contig13428:149..326Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13428 150..326 -
1683185984.869859-CDS-P-wetherbeei_contig13428:614..7751683185984.869859-CDS-P-wetherbeei_contig13428:614..775Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13428 615..775 -
1683185984.8769422-CDS-P-wetherbeei_contig13428:933..12041683185984.8769422-CDS-P-wetherbeei_contig13428:933..1204Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13428 934..1204 -
1683185984.8838282-CDS-P-wetherbeei_contig13428:1313..13731683185984.8838282-CDS-P-wetherbeei_contig13428:1313..1373Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13428 1314..1373 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13428.1.1prot_P-wetherbeei_contig13428.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13428 150..1373 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13428.1.1

>prot_P-wetherbeei_contig13428.1.1 ID=prot_P-wetherbeei_contig13428.1.1|Name=mRNA_P-wetherbeei_contig13428.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=223bp
VPKTLEERCEGRRVIVVLVKASLETVRTKKGDFELLNCDDHRSLVTKKSG
KDPADLRPDILHQELLALLDSPLNKEGRLQVYVHTSNNVLIEVSPQVRIP
RTFKRFSGLMVQLLHKLKIRAAGSSTMLLRVVKNPVTRHLPPGARVYGMS
ATGTLYSPVSFASQLPEDAPVVFYVGAMASGHVTVEEHPEIEQMIAVSAH
PLSGAAAITRLFAGIEHHWGIV*
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mRNA from alignment at P-wetherbeei_contig13428:150..1373-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13428.1.1 ID=mRNA_P-wetherbeei_contig13428.1.1|Name=mRNA_P-wetherbeei_contig13428.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1224bp|location=Sequence derived from alignment at P-wetherbeei_contig13428:150..1373- (Phaeothamnion wetherbeei SAG_119_79)
GTGCCCAAGACGTTGGAGGAGCGATGCGAAGGTCGAAGAGTAATCGTCGT CCTCGTGAAGGTGTCTTTTTCGCGCCTTTACTCTGTGTCCCTCGTATTTG AATCCCTCTTGCCTTCCAGGTTCATCGACCTCACAGCGGTGTTCACATTG ATCGTGACTCTCCTCGCAGGCCTCGTTGGAAACCGTTCGGACGAAGAAAG GCGACTTTGAACTTTTGAATTGCGACGACCACAGATCCCTCGTGACGAAG AAGTCGGGCAAGGATCCGGCGGACTTGCGCCCTGACATTCTCCATCAGGA GCTCCTCGCGTTGCTGGACAGTCCGTTGAATAAGGAGGGCCGGCTGCAGG TGTACGTGCATACGTCGAACAACGTGCTGATCGAAGTCAGCCCGCAGGTC CGGATACCACGGACCTTCAAGCGCTTCTCGGGCCTCATGGGTATGTCCGC TTCCGATCCATTTCTTGTGGGAAGTTTGCTGTGAAATGGAAAACATGCAG GCGGGCTTGCCAGGTGTTGAGGAAGATGGTAGAATCAGAAATTCTTGTGT TACAGAGCGGGCAGTCATCTGTTCTTCCTGTCGATCCGGATTCCGCAGTC CAACTACTGCACAAGCTGAAGATCCGGGCGGCGGGCTCGAGCACCATGCT GCTGCGCGTCGTCAAGAATCCCGTCACGCGTCACCTTCCTCCGGGCGCCA GAGTCTACGGGATGTCCGCCACTGGAACGCTGTACAGCCCCGTCAGCTTC GCATCTCAGGTGGGCTGTTATCTCCCCGCAAAAAGGCTGCAACCTTTTTG GCGCAAACATTTAACTTTAAAGAACCGGATTTTTTTGCCAACTGTGGTTG CTTGGAAACAGATCCATGCGTTATACCTCTTTGTCGCTCTTCCCGTATTC ACCCCTCTCCTTTCCGTCTCTGCCTTCTTTCCCTCTCTGTCACTCACGCC TTCCAAATACCCTCCTCTCGGTGGCGGCTTCGCGTCGCGCTGGAACGGCA TGATGTGGCACGGCACGGCATTGCCTGCGGCACGGCGCGGGCCTTAGCTC CCGGAGGATGCGCCAGTGGTGTTCTACGTGGGGGCGATGGCGTCCGGCCA CGTCACGGTGGAGGAGCACCCGGAGATCGAGCAGATGATCGCCGTGTCGG CGCACCCGCTCAGCGGCGCCGCGGCCATCACCCGGCTTTTCGCCGGCATC GAGCACCATTGGGGCATCGTCTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13428:150..1373-

>mRNA_P-wetherbeei_contig13428.1.1 ID=mRNA_P-wetherbeei_contig13428.1.1|Name=mRNA_P-wetherbeei_contig13428.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=669bp|location=Sequence derived from alignment at P-wetherbeei_contig13428:150..1373- (Phaeothamnion wetherbeei SAG_119_79)
GTGCCCAAGACGTTGGAGGAGCGATGCGAAGGTCGAAGAGTAATCGTCGT
CCTCGTGAAGGCCTCGTTGGAAACCGTTCGGACGAAGAAAGGCGACTTTG
AACTTTTGAATTGCGACGACCACAGATCCCTCGTGACGAAGAAGTCGGGC
AAGGATCCGGCGGACTTGCGCCCTGACATTCTCCATCAGGAGCTCCTCGC
GTTGCTGGACAGTCCGTTGAATAAGGAGGGCCGGCTGCAGGTGTACGTGC
ATACGTCGAACAACGTGCTGATCGAAGTCAGCCCGCAGGTCCGGATACCA
CGGACCTTCAAGCGCTTCTCGGGCCTCATGGTCCAACTACTGCACAAGCT
GAAGATCCGGGCGGCGGGCTCGAGCACCATGCTGCTGCGCGTCGTCAAGA
ATCCCGTCACGCGTCACCTTCCTCCGGGCGCCAGAGTCTACGGGATGTCC
GCCACTGGAACGCTGTACAGCCCCGTCAGCTTCGCATCTCAGCTCCCGGA
GGATGCGCCAGTGGTGTTCTACGTGGGGGCGATGGCGTCCGGCCACGTCA
CGGTGGAGGAGCACCCGGAGATCGAGCAGATGATCGCCGTGTCGGCGCAC
CCGCTCAGCGGCGCCGCGGCCATCACCCGGCTTTTCGCCGGCATCGAGCA
CCATTGGGGCATCGTCTAG
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