prot_P-wetherbeei_contig13427.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13427.1.1
Unique Nameprot_P-wetherbeei_contig13427.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length78
Homology
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BLAST of mRNA_P-wetherbeei_contig13427.1.1 vs. uniprot
Match: A0A6H5JZS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZS7_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 9.140e-21
Identity = 44/75 (58.67%), Postives = 54/75 (72.00%), Query Frame = 0 
Query:    1 QVNWGIAHLDLSFNEVSPRGVMVLAQALEQNNGLASLALHGNHIAFDGARMLVRSLNYWPIRRRLGLDNCSLGSE 75
            +VN G+  LDLS+NE+SP G +V+AQALE N+ L +L L GN I F+G R LVRSLNYW + R LGL NC L S 
Sbjct:  179 KVNDGLVCLDLSYNEISPTGALVIAQALENNDRLETLRLDGNSIGFNGGRTLVRSLNYWTLSRTLGLKNCMLESR 253
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13427.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JZS7_9PHAE9.140e-2158.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..78
e-value: 4.2E-14
score: 54.0
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 8..25
e-value: 0.025
score: 14.6
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 1..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13427contigP-wetherbeei_contig13427:440..673 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13427.1.1mRNA_P-wetherbeei_contig13427.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13427 440..673 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13427.1.1 ID=prot_P-wetherbeei_contig13427.1.1|Name=mRNA_P-wetherbeei_contig13427.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=78bp
QVNWGIAHLDLSFNEVSPRGVMVLAQALEQNNGLASLALHGNHIAFDGAR
MLVRSLNYWPIRRRLGLDNCSLGSEGAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt