prot_P-wetherbeei_contig1342.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1342.3.1
Unique Nameprot_P-wetherbeei_contig1342.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length399
Homology
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BLAST of mRNA_P-wetherbeei_contig1342.3.1 vs. uniprot
Match: A0A836C948_9STRA (BRCT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C948_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 3.850e-5
Identity = 33/91 (36.26%), Postives = 50/91 (54.95%), Query Frame = 0 
Query:  261 GSTPAVVALTGLDSETRRTVSDVVAGLAKKRRDDSCLAANGDPAAPFTHLVVPAADYGKRTMKVLFALCHNVPVVSMEWVFASLELGAWAD 351
            GS   +VA++GL +  +  ++ +V  L    R    +   G   A  THL+VP  +  +RT+KVLFA+C  VPVV+  W++ S   G W D
Sbjct: 1094 GSGRFLVAMSGLGAGDKLQLASIVEELG---RGGKAVLVAGTDGALCTHLIVPERE-PRRTLKVLFAMCRGVPVVTTRWLYESHAAGRWLD 1180
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1342.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836C948_9STRA3.850e-536.26BRCT domain-containing protein n=1 Tax=Tribonema m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190BRCT domaincoord: 266..367
e-value: 7.4E-13
score: 50.7
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 268..357
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 366..386
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 366..399
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 308..357
score: 10.30722

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1342contigP-wetherbeei_contig1342:1686..3057 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1342.3.1mRNA_P-wetherbeei_contig1342.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1342 1685..3057 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1342.3.1 ID=prot_P-wetherbeei_contig1342.3.1|Name=mRNA_P-wetherbeei_contig1342.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=399bp
GGHSSAGGTPASAGKDGKAASSGSSGKLAAAVKGGLAASAGGSGKAGKAA
SAGGSGKAVSAGCSGKAAGGSGKSESIGSQLKAADGVAAAADAKNIPPAA
SGGAAAKKMKRKGRDDASNSAASEEDAPRRRGKRACQATDESLNRGTAGG
GGSSGGGSKEVDAIPTGRARKQERSFWFMAEADAGGNGDDAGAGKAGSKR
ARKEPPEASAAAAAATTATVTAVASASAATSGNAATTGRAAATAAKAALG
SAGERPRPAAGSTPAVVALTGLDSETRRTVSDVVAGLAKKRRDDSCLAAN
GDPAAPFTHLVVPAADYGKRTMKVLFALCHNVPVVSMEWVFASLELGAWA
DPTQFAVLAFQQTPSRRGGSDSNGGSGSSAGRGSNGGGGARNSVLCKET
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036420BRCT_dom_sf
IPR001357BRCT_dom