prot_P-wetherbeei_contig13418.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13418.1.1
Unique Nameprot_P-wetherbeei_contig13418.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length212
Homology
BLAST of mRNA_P-wetherbeei_contig13418.1.1 vs. uniprot
Match: A0A836CM54_9STRA (Tryptophan--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM54_9STRA)

HSP 1 Score: 310 bits (793), Expect = 1.310e-102
Identity = 156/209 (74.64%), Postives = 176/209 (84.21%), Query Frame = 0
Query:    1 MAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQFCRKQKTKTFKEFQALIVKDGARVMSLQEGTCKMSKSDPNDGSRINLLDSADVIVRKVKKCKTDAFQGLEWDNPERPECKNLLTIYQAVTGLDREAVLADVGGMSWGAFKPLLAEAVVAHLSPLQARYAELIKDPQYLGQVLGEGADAADKIASKTLESAMQAMGFCTRKSLR 209
            MAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQ+C K+K    KE  ALI+KDGARVMSLQ+GT KMSKSDPNDGSRINL DSADVI RK+KKCKTDAF GLEW NPERPEC NLLT+YQA++G  RE V  +V GM WGAFKPLLA+A VAHLSP+Q RY E+++D  YL QVL EGA+AAD++AS+TL  A  AMGFC+ K L+
Sbjct:  161 MAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQYC-KRKRPVLKEPTALILKDGARVMSLQDGTSKMSKSDPNDGSRINLTDSADVIARKIKKCKTDAFDGLEWGNPERPECTNLLTLYQALSGQTREEVEKEVTGMRWGAFKPLLADAAVAHLSPIQLRYEEIMQDKAYLHQVLREGAEAADEVASQTLSWAKDAMGFCSLKDLQ 368          
BLAST of mRNA_P-wetherbeei_contig13418.1.1 vs. uniprot
Match: D7FKU6_ECTSI (Tryptophan--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKU6_ECTSI)

HSP 1 Score: 290 bits (742), Expect = 1.760e-94
Identity = 144/209 (68.90%), Postives = 173/209 (82.78%), Query Frame = 0
Query:    1 MAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQFCRKQKTKTFKEFQALIVKDGARVMSLQEGTCKMSKSDPNDGSRINLLDSADVIVRKVKKCKTDAFQGLEWDNPERPECKNLLTIYQAVTGLDREAVLADVGGMSWGAFKPLLAEAVVAHLSPLQARYAELIKDPQYLGQVLGEGADAADKIASKTLESAMQAMGFCTRKSLR 209
            MA+DILLY+ DLVPVGEDQRQHLELTRD+ARRFNDQFC K++ KTFK+ QALIVK+GARVMSL +GT KMSKSDP +GSRINL DS DVI +K+++CKTD  QGLEWDNP+RPEC NLLTIYQAVTG  RE V  +VG MSWG FKPLLA+A V HL PLQARY ++++D  YL +VL +GA+AAD++AS+TL  A +AMG  + K  +
Sbjct:  192 MASDILLYRPDLVPVGEDQRQHLELTRDLARRFNDQFC-KRRRKTFKDPQALIVKEGARVMSLTDGTSKMSKSDPVEGSRINLTDSPDVIAKKLRRCKTDMHQGLEWDNPDRPECTNLLTIYQAVTGKTREEVSLEVGDMSWGTFKPLLADATVEHLRPLQARYKDILEDRSYLNKVLRDGAEAADEVASETLGWAKEAMGISSLKDFQ 399          
BLAST of mRNA_P-wetherbeei_contig13418.1.1 vs. uniprot
Match: A0A6V1Q501_HETAK (Tryptophan--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1Q501_HETAK)

HSP 1 Score: 285 bits (730), Expect = 1.650e-92
Identity = 144/208 (69.23%), Postives = 168/208 (80.77%), Query Frame = 0
Query:    1 MAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQFCRKQKTKTFKEFQALIVKDGARVMSLQEGTCKMSKSDPNDGSRINLLDSADVIVRKVKKCKTDAFQGLEWDNPERPECKNLLTIYQAVTGLDREAVLADVGGMSWGAFKPLLAEAVVAHLSPLQARYAELIKDPQYLGQVLGEGADAADKIASKTLESAMQAMGFCTRKSL 208
            MAADILLYQ D VPVGEDQRQHLELTRDIA RFNDQF +++    FK+   LI ++GARVMSLQ+GT KMSKS  ND SRINL DS +VI RK+KKCKTD FQG+EWDNPERPEC NLLTIYQA TG  +EAVLA+VG M+WGAFKP+LA+AVV HL+P+QARYAEL+ DP +L +VL EGA AAD++A +TL     AMGF T + L
Sbjct:  202 MAADILLYQTDCVPVGEDQRQHLELTRDIAGRFNDQFVKRKMRPVFKQPTPLIAEEGARVMSLQDGTSKMSKSAENDNSRINLNDSPEVIRRKIKKCKTDQFQGMEWDNPERPECTNLLTIYQACTGKSKEAVLAEVGEMNWGAFKPVLADAVVDHLAPIQARYAELMADPTHLNRVLREGAAAADEVAQQTLLWTKNAMGFTTLEDL 409          
BLAST of mRNA_P-wetherbeei_contig13418.1.1 vs. uniprot
Match: A0A7S1TX50_9STRA (Tryptophan--tRNA ligase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TX50_9STRA)

HSP 1 Score: 280 bits (715), Expect = 8.010e-91
Identity = 138/204 (67.65%), Postives = 166/204 (81.37%), Query Frame = 0
Query:    1 MAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQFCRKQKT--KTFKEFQALIVKDGARVMSLQEGTCKMSKSDPNDGSRINLLDSADVIVRKVKKCKTDAFQGLEWDNPERPECKNLLTIYQAVTGLDREAVLADVGGMSWGAFKPLLAEAVVAHLSPLQARYAELIKDPQYLGQVLGEGADAADKIASKTLESAMQAMGF 202
            MA+DILLYQADLVPVGEDQ+QHLELTRDIARR+ND FC+K K   + F+E +ALIVK+GAR+MSLQ+GT KMSKS  N+ SRI+L D+ DVI RK+KKCKTD FQG+EWDNPERPE  NLL IYQAV+GL REA+LA+V  M+WGAFKPLL +AVV HLSP+Q +Y E++ DP YL  VL +GAD A+++A  TL  A   MGF
Sbjct:  156 MASDILLYQADLVPVGEDQKQHLELTRDIARRYNDMFCKKGKKVRRVFREPEALIVKEGARIMSLQDGTSKMSKSAENENSRISLTDTPDVIARKIKKCKTDQFQGIEWDNPERPEAANLLNIYQAVSGLSREAILAEVSEMNWGAFKPLLTDAVVEHLSPIQTKYNEVMADPVYLHGVLKDGADGANEVAEATLSWAKNGMGF 359          
BLAST of mRNA_P-wetherbeei_contig13418.1.1 vs. uniprot
Match: F0YGR9_AURAN (Tryptophan--tRNA ligase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGR9_AURAN)

HSP 1 Score: 275 bits (702), Expect = 3.410e-89
Identity = 137/208 (65.87%), Postives = 163/208 (78.37%), Query Frame = 0
Query:    1 MAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQFCRKQKTKTFKEFQALIVKDGARVMSLQEGTCKMSKSDPNDGSRINLLDSADVIVRKVKKCKTDAFQGLEWDNPERPECKNLLTIYQAVTGLDREAVLADVGGMSWGAFKPLLAEAVVAHLSPLQARYAELIKDPQYLGQVLGEGADAADKIASKTLESAMQAMGFCTRKSL 208
            MAADILLYQADLVPVGEDQRQHLELTRDIARRF+D +C K+K + F+E +ALIVK+GARVMSL +G  KMSKS P DGSRINL+DS D+I  K+KKCKTD  +GLEWDNP RPE  NLL IYQ+VTGL+RE +L DV  +SWGAFKP L +A++AHL P+Q  Y EL  D  +L Q L +GA  AD+IA+KTL+ A  AMG  TR  +
Sbjct:  136 MAADILLYQADLVPVGEDQRQHLELTRDIARRFHDLYC-KRKRRVFREPKALIVKEGARVMSLADGKAKMSKSAPIDGSRINLVDSPDLIASKIKKCKTDQLKGLEWDNPNRPEATNLLNIYQSVTGLEREVILRDVSDLSWGAFKPRLTDAIIAHLDPIQRAYKELAADQLFLSQTLKQGAHRADEIATKTLDDAKGAMGITTRSGV 342          
BLAST of mRNA_P-wetherbeei_contig13418.1.1 vs. uniprot
Match: A0A6U5CKF4_HEMAN (Tryptophan--tRNA ligase n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U5CKF4_HEMAN)

HSP 1 Score: 275 bits (703), Expect = 1.050e-87
Identity = 134/213 (62.91%), Postives = 169/213 (79.34%), Query Frame = 0
Query:    1 MAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQFCRKQKT-----KTFKEFQALIVKDGARVMSLQEGTCKMSKSDPNDGSRINLLDSADVIVRKVKKCKTDAFQGLEWDNPERPECKNLLTIYQAVTGLDREAVLADVGGMSWGAFKPLLAEAVVAHLSPLQARYAELIKDPQYLGQVLGEGADAADKIASKTLESAMQAMGFCTRKSL 208
            MAADILLYQA LVPVGEDQRQHLEL+RDIARRFND +C+K+       + F++ +ALIVK+GAR+MSL++GT KMSKSDP++GSRINL DS DVI +K+K+CKTD F G+EWDNPERPEC NLL I+QA +G  RE +L +V  M WG FKP+LAE VV HL+P+QARY EL+ D  YL QVL EGA+ A+++A++T++    AMGF +R  L
Sbjct:  256 MAADILLYQAQLVPVGEDQRQHLELSRDIARRFNDLYCKKKSMPAKGRRVFRDPEALIVKEGARIMSLEDGTSKMSKSDPSEGSRINLSDSPDVIRKKIKRCKTDNFDGIEWDNPERPECTNLLNIFQACSGRSREDILEEVKDMRWGEFKPVLAEVVVEHLAPIQARYQELVDDKTYLHQVLREGAEGAEEVAAQTMQWTKNAMGFTSRADL 468          
BLAST of mRNA_P-wetherbeei_contig13418.1.1 vs. uniprot
Match: A0A7S2BX70_9STRA (Tryptophan--tRNA ligase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BX70_9STRA)

HSP 1 Score: 265 bits (678), Expect = 4.070e-87
Identity = 138/205 (67.32%), Postives = 160/205 (78.05%), Query Frame = 0
Query:    1 MAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQFCRKQKT--KTFKEFQALIVKDGARVMSLQEGTCKMSKSDPNDGSRINLLDSADVIVRKVKKCKTD-AFQGLEWDNPERPECKNLLTIYQAVTGLDREAVLADVGGMSWGAFKPLLAEAVVAHLSPLQARYAELIKDPQYLGQVLGEGADAADKIASKTLESAMQAMGF 202
            MAADILLYQA  VPVGEDQRQHLELTRDIARRFND + +K+K   K F++ +ALIV DGARVMSLQ+GT KMSKS  ND SRINLLD  +VI +K+KKCKTD  F+GLEWDNPERPEC NLLTIYQAV+G  +E +  +V  M+WG FKP+LAEA+VAHLSP+Q RY EL+ D  YL  VL EGA  A+ +A  TL  A  AMGF
Sbjct:   18 MAADILLYQAGKVPVGEDQRQHLELTRDIARRFNDLYAKKKKRNEKPFRDCEALIVPDGARVMSLQDGTSKMSKSAENDNSRINLLDPPNVITKKIKKCKTDNGFEGLEWDNPERPECTNLLTIYQAVSGKSKEEIGEEVKDMNWGTFKPILAEAIVAHLSPIQDRYHELMNDKPYLYSVLREGALEANMVADDTLSKARTAMGF 222          
BLAST of mRNA_P-wetherbeei_contig13418.1.1 vs. uniprot
Match: A0A7S0VG95_9CRYP (Tryptophan--tRNA ligase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VG95_9CRYP)

HSP 1 Score: 272 bits (695), Expect = 1.620e-86
Identity = 132/213 (61.97%), Postives = 168/213 (78.87%), Query Frame = 0
Query:    1 MAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQFCRKQKT-----KTFKEFQALIVKDGARVMSLQEGTCKMSKSDPNDGSRINLLDSADVIVRKVKKCKTDAFQGLEWDNPERPECKNLLTIYQAVTGLDREAVLADVGGMSWGAFKPLLAEAVVAHLSPLQARYAELIKDPQYLGQVLGEGADAADKIASKTLESAMQAMGFCTRKSL 208
            MAADIL+YQA LVPVGEDQRQHLEL RDIARRFND +C+K+       + F++ +ALIVK+GAR+MSL++G  KMSKSDP++GSRINL DS +VI +K+K+CKTD F+G+EWDNP+RPEC NLL I+QA +G  RE +LA+V  M WG FKPLLA+ VV HL+P+QARY EL+ D  YL QVL EGA+ A+++A++TL     AMGF +R  L
Sbjct:  255 MAADILIYQAQLVPVGEDQRQHLELARDIARRFNDLYCKKKSMPAKGRRVFRDPEALIVKEGARIMSLEDGRSKMSKSDPSEGSRINLSDSEEVIRKKIKRCKTDNFEGIEWDNPDRPECTNLLNIFQACSGRTREDILAEVSDMKWGEFKPLLADVVVDHLAPIQARYKELVDDKTYLHQVLREGAEGAEEVAAQTLTWTKNAMGFTSRSDL 467          
BLAST of mRNA_P-wetherbeei_contig13418.1.1 vs. uniprot
Match: A0A7S4EDW2_9STRA (Tryptophan--tRNA ligase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDW2_9STRA)

HSP 1 Score: 269 bits (687), Expect = 1.760e-86
Identity = 136/205 (66.34%), Postives = 162/205 (79.02%), Query Frame = 0
Query:    1 MAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQFCRKQKTKTFKEFQALIVKDGARVMSLQEGTCKMSKSDPNDGSRINLLDSADVIVRKVKKCKTDAFQGLEWDNPERPECKNLLTIYQAVTGLDREAVLADVGGMSWGAFKPLLAEAVVAHLSPLQARYAELIKDPQYLGQVLGEGADAADKIASKTLESAMQAMGFCTR 205
            MAADILLYQA LVPVGEDQRQHLELTRDIARRF+D +C K+K + F+E +ALIVK+GARVMSL +G  KMSKS   D SRINL D    I RK+KKCK+D F GLEWDNPERPE  NLL IYQAVTG++R+A+LA+VG +SWG FKP LA+AVVAHL P+Q +YAE+  D  YL  VL  GA+ AD+ A++TL++A  AMGF  R
Sbjct:  171 MAADILLYQAGLVPVGEDQRQHLELTRDIARRFHDLYC-KRKKRVFREPKALIVKEGARVMSLTDGRAKMSKSAELDNSRINLNDDPATIARKIKKCKSDEFTGLEWDNPERPEATNLLNIYQAVTGMERDAILAEVGDLSWGGFKPRLADAVVAHLEPIQLKYAEVSADKAYLSGVLKSGAERADETATRTLDAAKAAMGFAPR 374          
BLAST of mRNA_P-wetherbeei_contig13418.1.1 vs. uniprot
Match: F0YNJ3_AURAN (Tryptophan--tRNA ligase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNJ3_AURAN)

HSP 1 Score: 263 bits (671), Expect = 6.570e-84
Identity = 131/202 (64.85%), Postives = 158/202 (78.22%), Query Frame = 0
Query:    1 MAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQFCRKQKTKTFKEFQALIVKDGARVMSLQEGTCKMSKSDPNDGSRINLLDSADVIVRKVKKCKTDAFQGLEWDNPERPECKNLLTIYQAVTGLDREAVLADVGGMSWGAFKPLLAEAVVAHLSPLQARYAELIKDPQYLGQVLGEGADAADKIASKTLESAMQAMGF 202
            MAADILLYQA LVPVG+DQRQHLELTRDIARRF+D +C K+K + F+E +ALIVK+G+RVMSL +GT KMSKS P D SRINL D  D+I  K+KKCKTD  +GLEWDNP+RPE  NLL IYQ+VTGL+ EA+L +V  +SWGAFKP L +AVVAHL P+Q  Y E+  D  YL Q L +GA  AD+IA++TL+ A  AMG 
Sbjct:  182 MAADILLYQAGLVPVGDDQRQHLELTRDIARRFHDMYC-KRKQRVFREPKALIVKEGSRVMSLTDGTVKMSKSAPLDNSRINLSDPPDLIASKIKKCKTDQVKGLEWDNPDRPEAANLLNIYQSVTGLEHEAILREVSDLSWGAFKPRLTDAVVAHLEPIQRAYKEIAADQHYLSQTLKQGAYRADEIATRTLDDAKSAMGI 382          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13418.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CM54_9STRA1.310e-10274.64Tryptophan--tRNA ligase n=1 Tax=Tribonema minus Ta... [more]
D7FKU6_ECTSI1.760e-9468.90Tryptophan--tRNA ligase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6V1Q501_HETAK1.650e-9269.23Tryptophan--tRNA ligase n=1 Tax=Heterosigma akashi... [more]
A0A7S1TX50_9STRA8.010e-9167.65Tryptophan--tRNA ligase n=1 Tax=Phaeomonas parva T... [more]
F0YGR9_AURAN3.410e-8965.87Tryptophan--tRNA ligase n=1 Tax=Aureococcus anopha... [more]
A0A6U5CKF4_HEMAN1.050e-8762.91Tryptophan--tRNA ligase n=1 Tax=Hemiselmis anderse... [more]
A0A7S2BX70_9STRA4.070e-8767.32Tryptophan--tRNA ligase n=1 Tax=Florenciella parvu... [more]
A0A7S0VG95_9CRYP1.620e-8661.97Tryptophan--tRNA ligase n=1 Tax=Hemiselmis tepida ... [more]
A0A7S4EDW2_9STRA1.760e-8666.34Tryptophan--tRNA ligase n=1 Tax=Pelagomonas calceo... [more]
F0YNJ3_AURAN6.570e-8464.85Tryptophan--tRNA ligase n=1 Tax=Aureococcus anopha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002306Tryptophan-tRNA ligasePRINTSPR01039TRNASYNTHTRPcoord: 11..32
score: 62.23
coord: 69..79
score: 57.05
NoneNo IPR availableGENE3D1.10.240.10coord: 60..170
e-value: 3.3E-34
score: 119.2
NoneNo IPR availablePANTHERPTHR43766:SF1TRYPTOPHAN--TRNA LIGASE, MITOCHONDRIALcoord: 1..202
NoneNo IPR availablePANTHERPTHR43766TRYPTOPHAN--TRNA LIGASE, MITOCHONDRIALcoord: 1..202
NoneNo IPR availableSUPERFAMILY52374Nucleotidylyl transferasecoord: 1..202
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620HUPscoord: 1..55
e-value: 8.6E-15
score: 56.6
IPR002305Aminoacyl-tRNA synthetase, class IcPFAMPF00579tRNA-synt_1bcoord: 1..157
e-value: 3.2E-37
score: 128.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13418contigP-wetherbeei_contig13418:28..1689 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13418.1.1mRNA_P-wetherbeei_contig13418.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13418 4..1689 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13418.1.1 ID=prot_P-wetherbeei_contig13418.1.1|Name=mRNA_P-wetherbeei_contig13418.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=212bp
MAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQFCRKQKTKTFKEFQ
ALIVKDGARVMSLQEGTCKMSKSDPNDGSRINLLDSADVIVRKVKKCKTD
AFQGLEWDNPERPECKNLLTIYQAVTGLDREAVLADVGGMSWGAFKPLLA
EAVVAHLSPLQARYAELIKDPQYLGQVLGEGADAADKIASKTLESAMQAM
GFCTRKSLRSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002306Trp-tRNA-ligase
IPR014729Rossmann-like_a/b/a_fold
IPR002305aa-tRNA-synth_Ic