mRNA_P-wetherbeei_contig13398.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13398.1.1
Unique NamemRNA_P-wetherbeei_contig13398.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13398.1.1 vs. uniprot
Match: A0A7X9KJH0_9ACTN (Diguanylate cyclase n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9KJH0_9ACTN)

HSP 1 Score: 537 bits (1383), Expect = 1.450e-186
Identity = 267/416 (64.18%), Postives = 335/416 (80.53%), Query Frame = 1
Query:    1 VIVDHHTQNDRLADAAHVLAEAMYALERLPDDPAVFQVMHNLAVTYSRCGFVHAALELYDRALRLADNEADKQFTYSNMAVAYHFAALAEPDDAARDSLLHDGLYAATAALDPQGGAEIMATGLAMAHRSMMLAEIGHFDAALRDAQRARVITSEHGMREEQVAAMCGEVVSRWALSRDASVLDLIAETYDLAAEIHFEDILQPIRDVEVDILWTLEKFECARTAMRRNTRQLMARIHQESSARWEHVRLGVEHKRVEAISESDPLTGLPNRRYLGHWLPEVFEEHPPVCVGVVDLDGFKQINDDFNYEAGDRVLQEVATLLERVCRRGDAVVRIGGDEFVMVLREASLNDARVVFERIRQLIATHTWSGLPRDVTLTASVGVAAGSGSFDSARVLAAATEAMQAAKRTGRNRITF 1248
            V+VDH+T++DRLA+AAH+L+EA Y L+RLP+D   +QVMHN+AVTY++CGFV AALELYDRALRLA+++ D+QF Y+++  AYH+AA  +P+   R+ LLHDGLYAATAALDP+GG E++A   A+AHRSMMLAEIGH+ AAL DA+ AR +  EHGMREEQV AM GE ++ W  S++  VLDLI  T  LA EI + + L P+  VEV++LW +E+F+ ARTA+ RN      R+H E +ARWEHVRLGVEH RVEA+SESDPLTGLPNRR+L H LPEV EEH PVCVGV+DLDGFK++ND+F Y  GD VLQEVA +LERVCRRGD+V+R+GGDEF+MVLRE S  DAR VFER+RQLIAT TW G+P  V +TASVGVA GSG+ +S+RVLA A  A+Q AK++GR+R+TF
Sbjct:   97 VVVDHYTRDDRLAEAAHILSEAAYILDRLPNDAGNYQVMHNMAVTYAQCGFVEAALELYDRALRLAEHDEDRQFAYASICAAYHYAAQRDPNPDERNRLLHDGLYAATAALDPEGGGEVLAMCPALAHRSMMLAEIGHYHAALDDARNARHLAIEHGMREEQVIAMTGEAMALWGSSQNTDVLDLIRNTLALATEISYTNYLAPLLRVEVEVLWKMERFDDARTALERNLSDANRRLHDERTARWEHVRLGVEHLRVEALSESDPLTGLPNRRHLAHLLPEVLEEHAPVCVGVIDLDGFKRVNDEFGYLEGDSVLQEVAGVLERVCRRGDSVIRLGGDEFLMVLRETSPGDARSVFERVRQLIATRTWHGIPGSVVITASVGVAVGSGAAESSRVLADAAAALQQAKKSGRDRVTF 512          
BLAST of mRNA_P-wetherbeei_contig13398.1.1 vs. uniprot
Match: A0A539E404_9ACTN (Diguanylate cyclase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539E404_9ACTN)

HSP 1 Score: 451 bits (1161), Expect = 5.450e-153
Identity = 229/408 (56.13%), Postives = 295/408 (72.30%), Query Frame = 1
Query:   25 NDRLADAAHVLAEAMYALERLPDDPAVFQVMHNLAVTYSRCGFVHAALELYDRALRLADNEADKQFTYSNMAVAYHFAALAEPDDAARDSLLHDGLYAATAALDPQGGAEIMATGLAMAHRSMMLAEIGHFDAALRDAQRARVITSEHGMREEQVAAMCGEVVSRWALSRDASVLDLIAETYDLAAEIHFEDILQPIRDVEVDILWTLEKFECARTAMRRNTRQLMARIHQESSARWEHVRLGVEHKRVEAISESDPLTGLPNRRYLGHWLPEVFEEHPPVCVGVVDLDGFKQINDDFNYEAGDRVLQEVATLLERVCRRGDAVVRIGGDEFVMVLREASLNDARVVFERIRQLIATHTWSGLPRDVTLTASVGVAAGSGSFDSARVLAAATEAMQAAKRTGRNRITF 1248
            ++R A+A+ V++EAMY +ER+P+DPA +QV+HN+AVTY RC F   A+ELYDRALRLA  E D+ FTY+ +A A+H A +   D+A     LHDG+YAATAALD Q   E++A  +A+AHRS++L  IGH  AAL DA RAR I + H +REE+V AM GE V+RW L +D +V++LIA+  D A  +  E  L     V +DILW   +++ AR  M      L   + +E  ARWEHVRLGV  K  EA+SESDPLT LPNRRYL HWLP+V E H PVCV ++DLDGFKQ+NDDF+YE GD +L E+A +L+R+CRRGDAV+RIGGDEFV+VLRE S ND R V ER+RQLIA   W GLP  + L+AS+GV+ GSG+ D++RVLAAA +A+  AKR GR+RI F
Sbjct:  100 DERYAEASAVMSEAMYVMERVPNDPAYYQVIHNMAVTYQRCEFPIPAIELYDRALRLARTERDRTFTYAGLASAFHMAMIFSNDEATASRHLHDGIYAATAALDSQADREVVAEAIALAHRSVLLNSIGHHQAALDDAVRARTIAAAHVLREEEVVAMIGEAVARWNLHKDPTVVELIADAADRARTLGVEVYLSSAAPVNIDILWEGGRYDDAREMMAMQFNALSRALQREREARWEHVRLGVSLKSTEALSESDPLTNLPNRRYLSHWLPDVLENHGPVCVALLDLDGFKQVNDDFSYEHGDHLLLELAGILQRICRRGDAVIRIGGDEFVLVLRETSPNDGRAVLERVRQLIAVRPWQGLPAGLRLSASIGVSVGSGAVDASRVLAAAGDALHVAKREGRDRIVF 507          
BLAST of mRNA_P-wetherbeei_contig13398.1.1 vs. uniprot
Match: A0A6J6EC76_9ZZZZ (Unannotated protein n=2 Tax=root TaxID=1 RepID=A0A6J6EC76_9ZZZZ)

HSP 1 Score: 409 bits (1052), Expect = 4.700e-136
Identity = 220/406 (54.19%), Postives = 283/406 (69.70%), Query Frame = 1
Query:   37 ADAAHVLAEAMYALERLPDDPAVFQVMHNLAVTYSRCGFVHAALELYDRALRLADNEADKQFTYSNMAVAYHFAAL--AEPDDAARDSLLHDGLYAATAALDPQGGAEIMATGLAMAHRSMMLAEIGHFDAALRDAQRARVITSEHGMREEQVAAMCGEVVSRWALSRDASVLDLIAETYDLAAEIHFEDILQPIRDVEVDILWTLEKFECARTAMRRNTRQLMARIHQESSARWEHVRLGVEHKRVEAISESDPLTGLPNRRYLGHWLPEVFEEHPPVCVGVVDLDGFKQINDDFNYEAGDRVLQEVATLLERVCRRGDAVVRIGGDEFVMVLREASLNDARVVFERIRQLIATHTWSGLPRDVTLTASVGVAAGSGSFDSARVLAAATEAMQAAKRTGRNRITF 1248
            A A+ VLAEAMY L R+PDDPA  QV+HN+AVTY RC F   A++LY RA+RLA +++++ F  +NMA A+H A +  A+ D AAR   LHDG+ AATAAL+  G  E++    A+AHRS+ML  +G    AL DAQR R +   H + + +V AM GE V+RW L RDASVLDLI +    AAE++    L+      +DILW   +++ AR  M R    L A + +E  ARW HVR+GV  +  EA S +DPLT LPNRR+L  WLP+V E+HPPVCV +VDLDGFK +NDD  YE GD +LQE+A +L+R+CRRGDAV+R+GGDEFV+VLR+ S  DAR V ER+RQLIA  TW GLP DVT+T S+GVA G+G+ D  RVLAAA +A+  AKR GRNR+ F
Sbjct:  137 AAASEVLAEAMYVLLRVPDDPADHQVIHNMAVTYQRCDFPIPAIDLYRRAMRLAPDDSERAFISANMASAHHLAMIHEADLDQAARH--LHDGIAAATAALEMPGPLEVVTEATALAHRSVMLNAMGRHTEALADAQRCRDLARVHELPDSEVVAMVGEAVARWNLERDASVLDLIFDAAAQAAEMNIGAYLKSSARTSIDILWESGRYDEAREVMNRQVEGLTATLRREREARWGHVRIGVSLRSSEATSATDPLTDLPNRRHLHTWLPQVLEQHPPVCVALVDLDGFKAVNDDHGYEHGDSLLQELAGILQRICRRGDAVIRLGGDEFVIVLRDTSPGDARSVLERMRQLIANRTWRGLPPDVTVTVSIGVAVGAGADDVQRVLAAAGDALHVAKRDGRNRVVF 540          
BLAST of mRNA_P-wetherbeei_contig13398.1.1 vs. uniprot
Match: A0A3C2B4X1_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B4X1_9ACTN)

HSP 1 Score: 319 bits (818), Expect = 4.050e-103
Identity = 157/272 (57.72%), Postives = 205/272 (75.37%), Query Frame = 1
Query:    1 VIVDHHTQNDRLADAAHVLAEAMYALERLPDDPAVFQVMHNLAVTYSRCGFVHAALELYDRALRLADNEADKQFTYSNMAVAYHFAALAEPDDAARDSLLHDGLYAATAALDPQGGAEIMATGLAMAHRSMMLAEIGHFDAALRDAQRARVITSEHGMREEQVAAMCGEVVSRWALSRDASVLDLIAETYDLAAEIHFEDILQPIRDVEVDILWTLEKFECARTAMRRNTRQLMARIHQESSARWEHVRLGVEHKRVEAISESDPLTGLPNR 816
            VI D+H + DRLA+AAH L+EAMY L+RLP++P  + V+HN+ VTY+  GF+ AALEL+DRALR+ADN+ D+QFTY++M  AYH+AA  E D   R+ LLHDGLYAATAALDP G  E+++ G A+AHRSMML E+GH+ AA+ DA+ AR I +EHGM EEQV AM GE ++ W   R+  VL L+ +T  L  E++    L P++ VEV+ILW LE+F+ AR A+ R+ R  + R++ E +ARWEHVRLGVEH RVEA+S SDPLTGLPNR
Sbjct:   99 VIADNHVRCDRLAEAAHALSEAMYLLDRLPNEPEHYDVIHNMGVTYAHSGFMEAALELFDRALRVADNDDDRQFTYASMTSAYHYAAQREQDPLERNRLLHDGLYAATAALDPAGAREVLSMGTALAHRSMMLCEVGHYHAAITDARAARAIAAEHGMIEEQVIAMAGEAIATWRSQREPDVLGLVRDTLALGGELNLTGNLGPLQAVEVEILWALERFDEARAALERSQRDTLRRLYDERAARWEHVRLGVEHLRVEALSTSDPLTGLPNR 370          
BLAST of mRNA_P-wetherbeei_contig13398.1.1 vs. uniprot
Match: A0A3C2B6J7_9ACTN (GGDEF domain-containing protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B6J7_9ACTN)

HSP 1 Score: 172 bits (437), Expect = 2.480e-49
Identity = 89/129 (68.99%), Postives = 101/129 (78.29%), Query Frame = 1
Query:  796 LTGLPNRRYLGHWLPEVFEEHPPVCVGVVDLDGFKQINDDFNYEAGDRVLQEVATLLERVCRRGDAVVRIGGDEFVMVLREASLNDARVVFERIRQLIATHTWSGLPRDVTLTASVGVAAGSGSFDSAR 1182
            LTGLPNRR+L   LP+ F+   PVCV V+DLDGFKQ+ND+  Y  GD VLQEVA LLERVCRR DAVVR+GGDEFVMVLR+ S  DAR VFER+RQLIA  T++GLP  V LTASVGVA GS   DS+R
Sbjct:    1 LTGLPNRRHLDTILPDAFDGTAPVCVAVIDLDGFKQVNDEHGYMLGDTVLQEVAGLLERVCRRNDAVVRLGGDEFVMVLRDTSPGDARAVFERVRQLIAARTFNGLPTSVRLTASVGVAVGSAPMDSSR 129          
BLAST of mRNA_P-wetherbeei_contig13398.1.1 vs. uniprot
Match: A0A5E8DCA7_9MICO (GGDEF domain-containing protein n=11 Tax=Cryobacterium TaxID=69578 RepID=A0A5E8DCA7_9MICO)

HSP 1 Score: 127 bits (319), Expect = 3.140e-28
Identity = 130/433 (30.02%), Postives = 196/433 (45.27%), Query Frame = 1
Query:   49 HVLAEAMYALERLPDDPAVFQVMHNLAVTYSRCGFVHAALELYDRALRLADNEADKQFTYS---NMAVAY---HFAALAEPDDAARDSLLHDGLY---AATAALDPQGGAEIMATGLAMAHRSMMLAEIGHFDAALRDAQRARVITSEHGMRE---------EQVAAMCGEVVSRWALSRDASVLD-LIAETYDLAAEIH------------FEDILQPIRDVEVDILWTLEKFECARTAMRRNTRQLMARIHQESSARWEHVRLGVEHKRVEAISESDPLTGLPNRRYLGHWLPEVF----EEHPPVCVGVVDLDGFKQINDDFNYEAGDRVLQEVATLLERVCRRGDAVVRIGGDEFVMVLREASLNDARVVFERIRQLIATHTWSGLPRDVTLTASVGVAAGSGSFDSARVLAAATEAMQAAKRTGRNRI 1242
            HVL  A+ A        A F  +   ++ +   G    ++EL  +AL LAD   D Q  ++   N+  +Y     A  A  +DA     L DG+    AA A    QG A      +A  +    L E G +  A R A R++ I   +G R           +VA   G V    A+  DA + D  +AE   L  ++H            FE  L     + V IL    +    ++ M  N+ ++    H+   ++ E     +  + ++  + +DPLT LPNRR L   LPE+     E   P+C  +VD+D FK++NDD  + AGDRVL  +A +L    R  D  VR+GG+EF++VL + +L+ A  + ER+   +  H W  +   +  TASVGVA        +R L  A  A+  AK  GRNR+
Sbjct:  190 HVLG-ALEAARLCGSRTAEFWALSRSSMVHQALGDADRSIELGRQALALADTLGDSQAEFAARNNLGDSYLEIARARRARGEDA--HVALTDGIAIIRAAVARAVEQGHA--FDETIARTNLVGFLMERGEYAEARRQAGRSKTIAVTNGYRNLAVNNDSQLAEVAQAEGRVDLACAMM-DAQLADPSVAEDAALNVKLHRSLYEMHRGAGRFEQALHHHERLHVLILGLTRQTAGLQSRMLINSLEIEQARHEAQRSQLEAEMQRIRAEELDQQAHTDPLTRLPNRRALDRQLPEMMRLARERAEPLCAVMVDMDHFKRVNDDHGHAAGDRVLTTMAEILGESTRDSDLAVRVGGEEFLLVLGDTTLDQAAQICERLLGEVRNHPWGAVTEGLRCTASVGVALLKQGESVSRWLGRADAALYEAKAAGRNRV 616          
BLAST of mRNA_P-wetherbeei_contig13398.1.1 vs. uniprot
Match: A0A4Q7DIT4_9MICO (Diguanylate cyclase YdeH n=2 Tax=unclassified Cryobacterium TaxID=2649013 RepID=A0A4Q7DIT4_9MICO)

HSP 1 Score: 125 bits (315), Expect = 1.050e-27
Identity = 127/433 (29.33%), Postives = 202/433 (46.65%), Query Frame = 1
Query:   46 AHVLAEAMYALERLPDDPAVFQVMHNLAVTYSRCGFVHAALELYDRALRLADNEADKQFTYS---NMAVAYHFAALA---EPDDAARDSLLHDGLYAATAALDPQGGAEIMATGLAMAHRSM--MLAEIGHFDAALRDAQRARVITSEHGMRE---------EQVAAMCGEVVSRWALSRDASVLD-LIAETYDLAAEIH------------FEDILQPIRDVEVDILWTLEKFECARTAMRRNTRQLMARIHQESSARWEHVRLGVEHKRVEAISESDPLTGLPNRRYLGHWLPEVF----EEHPPVCVGVVDLDGFKQINDDFNYEAGDRVLQEVATLLERVCRRGDAVVRIGGDEFVMVLREASLNDARVVFERIRQLIATHTWSGLPRDVTLTASVGVAAGSGSFDSARVLAAATEAMQAAKRTGRNRI 1242
            +HVL  A+ A        A F  +   ++ +   G    ++EL  +AL LAD   D +  ++   N+  +Y   A A   + +DA+    L DG+ A T A   Q   +  A    +A  ++  +L E G +  A R A R++ I   +G R           +VA   G V    A+  +A V D  +AE   L  ++H            FE  L+    + V +L    +    ++ M  N+ ++    H+   ++ E     +  + ++  + SDPLT LPNRR L   LPE+     E   P+C  +VD+D FKQ+ND+  +  GDRVL  +AT+L    R  D  VR+GG+EF++VL   +++ A  + ER+   +  H W  +   +  TASVGVA        +R L  A  A+  AK +GRNR+
Sbjct:  187 SHVLG-ALAAARASGSRTAEFWALSRSSMVHQALGDADRSIELGRQALALADTIDDPEAAFAARNNLGDSYLEIARAHRAKEEDAS--VALRDGI-AVTRAAVTQAVEQRHAFYETIARTNLVGLLIERGEYAEARRQAGRSKTIAITNGYRNLAVNNDAQLAEVARAEGRVDLACAMM-EAQVADPSVAEDAALNVKLHRALYQMHQAAGRFEQALEHHEQLHVLMLGLTRQTAGLQSRMLINSLEIEQARHEAQRSQLEAEMQRIRAEELDKQAHSDPLTRLPNRRALDRQLPEMMSSARERSEPLCAVMVDMDHFKQVNDEHGHATGDRVLTTMATILGNTTRDTDLAVRVGGEEFLLVLGNTTIDQAVQICERLLGEVRNHPWGVVTAGLHCTASVGVALLKPDESVSRWLGRADAALYEAKASGRNRV 614          
BLAST of mRNA_P-wetherbeei_contig13398.1.1 vs. uniprot
Match: UPI001E465E03 (diguanylate cyclase n=1 Tax=Alteromonas macleodii TaxID=28108 RepID=UPI001E465E03)

HSP 1 Score: 124 bits (310), Expect = 2.160e-27
Identity = 66/171 (38.60%), Postives = 104/171 (60.82%), Query Frame = 1
Query:  748 LGVEHKRVEAISESDPLTGLPNRRYLGHWLPEVFEE----HPPVCVGVVDLDGFKQINDDFNYEAGDRVLQEVATLLERVCRRGDAVVRIGGDEFVMVLREASLNDARVVFERIRQLIATHTWSGLPRDVTLTASVGVAAGSGSFDSARVLAAATEAMQAAKRTGRNRITF 1248
            L ++ KR E  +  D LTG+ NRR    WL + FEE      P+C+ V+D+D FKQ+ND +++  GD+V+ EVA +L R         R GG+EF ++L E  L +ARV  + +R+++A H +S + + + +T S+GVA+  G+ D  R+L  A +A+  AK  GRN++T 
Sbjct:  329 LELQTKRFEFQATHDDLTGIANRRAFDRWLVQYFEEAKAKQSPLCLAVIDIDHFKQVNDQYSHLVGDKVITEVARILNREVPHYAKCARWGGEEFTVLLPEYDLINARVAMDHVRKIVAAHDFSFIAQTLKVTISIGVASADGARDHDRMLTHADQALYTAKENGRNQVTI 499          
BLAST of mRNA_P-wetherbeei_contig13398.1.1 vs. uniprot
Match: A0A6C5N1R5_ALTMA (Diguanylate cyclase (GGDEF) domain-containing protein n=2 Tax=Alteromonas macleodii TaxID=28108 RepID=A0A6C5N1R5_ALTMA)

HSP 1 Score: 124 bits (310), Expect = 5.060e-27
Identity = 66/171 (38.60%), Postives = 104/171 (60.82%), Query Frame = 1
Query:  748 LGVEHKRVEAISESDPLTGLPNRRYLGHWLPEVFEE----HPPVCVGVVDLDGFKQINDDFNYEAGDRVLQEVATLLERVCRRGDAVVRIGGDEFVMVLREASLNDARVVFERIRQLIATHTWSGLPRDVTLTASVGVAAGSGSFDSARVLAAATEAMQAAKRTGRNRITF 1248
            L ++ KR E  +  D LTG+ NRR    WL + FEE      P+C+ V+D+D FKQ+ND +++  GD+V+ EVA +L R         R GG+EF ++L E  L +ARV  + +R+++A H +S + + + +T S+GVA+  G+ D  R+L  A +A+  AK  GRN++T 
Sbjct:  462 LELQTKRFEFQATHDDLTGIANRRAFDRWLVQYFEEAKAKQSPLCLAVIDIDHFKQVNDQYSHLVGDKVITEVARILNREVPHYAKCARWGGEEFTVLLPEYDLVNARVAMDHVRKIVAAHDFSFIAQTLKVTISIGVASADGARDHDRMLTHADQALYTAKENGRNQVTI 632          
BLAST of mRNA_P-wetherbeei_contig13398.1.1 vs. uniprot
Match: UPI001942B4FA (GGDEF domain-containing protein n=1 Tax=Actinoplanes couchii TaxID=403638 RepID=UPI001942B4FA)

HSP 1 Score: 122 bits (307), Expect = 6.160e-27
Identity = 71/164 (43.29%), Postives = 92/164 (56.10%), Query Frame = 1
Query:  757 EHKRVEAISESDPLTGLPNRRYLGHWLPEVFEEHPPVCVGVVDLDGFKQINDDFNYEAGDRVLQEVATLLERVCRRGDAVVRIGGDEFVMVLREASLNDARVVFERIRQLIATHTWSGLPRDVTLTASVGVAAGSGSFDSARVLAAATEAMQAAKRTGRNRITF 1248
            E +R    +  DPLTGLPNRRY+   LP +     P  V +VDLD FK++ND  ++E GDRVL  VA LL R  R G    R+GG+EF++VL  A   +A    ER RQ +  H WS L   + +T SVG        D   VLAAA   +  AK +GRNR+ +
Sbjct:  351 EAERFREQARRDPLTGLPNRRYVDEHLPALLAAGGPTVVALVDLDHFKRVNDLCSHEIGDRVLTVVAGLLTRAARAGGFAARLGGEEFLLVLTGAGTAEAAPALERFRQSVQDHPWSVLTGRLPVTVSVGAHQAMPGDDQTAVLAAADRLLYEAKGSGRNRVCY 514          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13398.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X9KJH0_9ACTN1.450e-18664.18Diguanylate cyclase n=2 Tax=Actinobacteria TaxID=2... [more]
A0A539E404_9ACTN5.450e-15356.13Diguanylate cyclase n=1 Tax=Acidimicrobiaceae bact... [more]
A0A6J6EC76_9ZZZZ4.700e-13654.19Unannotated protein n=2 Tax=root TaxID=1 RepID=A0A... [more]
A0A3C2B4X1_9ACTN4.050e-10357.72Uncharacterized protein (Fragment) n=1 Tax=Acidimi... [more]
A0A3C2B6J7_9ACTN2.480e-4968.99GGDEF domain-containing protein (Fragment) n=1 Tax... [more]
A0A5E8DCA7_9MICO3.140e-2830.02GGDEF domain-containing protein n=11 Tax=Cryobacte... [more]
A0A4Q7DIT4_9MICO1.050e-2729.33Diguanylate cyclase YdeH n=2 Tax=unclassified Cryo... [more]
UPI001E465E032.160e-2738.60diguanylate cyclase n=1 Tax=Alteromonas macleodii ... [more]
A0A6C5N1R5_ALTMA5.060e-2738.60Diguanylate cyclase (GGDEF) domain-containing prot... [more]
UPI001942B4FA6.160e-2743.29GGDEF domain-containing protein n=1 Tax=Actinoplan... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13398contigP-wetherbeei_contig13398:594..1847 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog314275.MADE_1006425
PFAMsGGDEF,Reg_prop,Y_Y_Y
Model size1254
Max annot lvl1236|Gammaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.3e-27
EggNOG OGsCOG2199@1|root,COG3292@1|root,COG3292@2|Bacteria,COG3706@2|Bacteria,1R7HC@1224|Proteobacteria,1RQCR@1236|Gammaproteobacteria,46686@72275|Alteromonadaceae
Descriptionperiplasmic ligand-binding sensor domain
Cds size1254
COG categoryT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185983.498378-CDS-P-wetherbeei_contig13398:593..18471683185983.498378-CDS-P-wetherbeei_contig13398:593..1847Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13398 594..1847 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13398.1.1prot_P-wetherbeei_contig13398.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13398 594..1847 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13398.1.1

>prot_P-wetherbeei_contig13398.1.1 ID=prot_P-wetherbeei_contig13398.1.1|Name=mRNA_P-wetherbeei_contig13398.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=418bp
VIVDHHTQNDRLADAAHVLAEAMYALERLPDDPAVFQVMHNLAVTYSRCG
FVHAALELYDRALRLADNEADKQFTYSNMAVAYHFAALAEPDDAARDSLL
HDGLYAATAALDPQGGAEIMATGLAMAHRSMMLAEIGHFDAALRDAQRAR
VITSEHGMREEQVAAMCGEVVSRWALSRDASVLDLIAETYDLAAEIHFED
ILQPIRDVEVDILWTLEKFECARTAMRRNTRQLMARIHQESSARWEHVRL
GVEHKRVEAISESDPLTGLPNRRYLGHWLPEVFEEHPPVCVGVVDLDGFK
QINDDFNYEAGDRVLQEVATLLERVCRRGDAVVRIGGDEFVMVLREASLN
DARVVFERIRQLIATHTWSGLPRDVTLTASVGVAAGSGSFDSARVLAAAT
EAMQAAKRTGRNRITFH*
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mRNA from alignment at P-wetherbeei_contig13398:594..1847-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13398.1.1 ID=mRNA_P-wetherbeei_contig13398.1.1|Name=mRNA_P-wetherbeei_contig13398.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1254bp|location=Sequence derived from alignment at P-wetherbeei_contig13398:594..1847- (Phaeothamnion wetherbeei SAG_119_79)
GTCATCGTCGATCACCACACGCAGAACGATCGGCTCGCCGACGCGGCACA CGTGCTGGCCGAGGCGATGTACGCACTGGAGCGACTGCCGGACGACCCGG CCGTGTTCCAGGTGATGCACAACTTGGCGGTGACGTACTCGCGCTGCGGG TTCGTTCACGCCGCGCTGGAGCTCTACGACCGGGCGTTGCGTCTGGCCGA CAACGAGGCCGACAAGCAGTTCACGTACTCGAACATGGCCGTCGCCTACC ACTTCGCCGCGCTCGCCGAGCCCGACGATGCGGCACGCGACTCGCTGCTG CACGACGGCCTCTACGCCGCGACCGCAGCCCTGGATCCGCAGGGCGGCGC CGAGATCATGGCCACCGGACTGGCGATGGCACACCGTTCGATGATGCTCG CCGAGATCGGTCACTTCGACGCCGCGCTGCGCGACGCGCAGCGGGCCCGA GTGATCACGAGCGAGCACGGCATGCGCGAGGAGCAGGTCGCCGCAATGTG CGGCGAAGTCGTGTCGCGCTGGGCCCTGTCGAGGGATGCCTCGGTGCTCG ACCTGATCGCCGAAACGTACGACCTGGCCGCCGAGATCCACTTCGAAGAC ATCCTGCAGCCGATCCGCGACGTCGAGGTGGACATCCTGTGGACGTTGGA GAAGTTCGAGTGCGCACGCACGGCGATGCGGCGCAACACGCGCCAGTTGA TGGCGCGCATCCACCAGGAGTCGTCAGCTCGTTGGGAGCACGTGCGCCTC GGCGTCGAGCACAAGCGCGTCGAAGCGATCAGCGAGAGCGACCCGCTCAC GGGTCTGCCGAACCGTCGCTACCTCGGCCACTGGTTGCCCGAGGTGTTCG AGGAGCACCCGCCGGTGTGCGTCGGTGTGGTCGACCTCGACGGCTTCAAG CAGATCAACGACGACTTCAACTACGAAGCCGGCGATCGCGTGCTGCAGGA AGTGGCGACGCTGCTGGAACGCGTGTGCCGCCGCGGCGACGCCGTCGTGC GCATCGGCGGCGACGAGTTCGTGATGGTGCTGCGCGAAGCGTCGCTGAAC GACGCCCGTGTCGTGTTCGAACGCATCCGCCAGCTGATCGCCACGCACAC GTGGAGCGGCCTGCCGCGCGACGTGACGCTCACCGCGTCCGTCGGTGTCG CTGCCGGCAGCGGCTCCTTCGACTCAGCTCGTGTCTTGGCCGCCGCCACC GAAGCGATGCAAGCCGCCAAACGAACCGGCCGCAACCGCATCACCTTCCA CTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13398:594..1847-

>mRNA_P-wetherbeei_contig13398.1.1 ID=mRNA_P-wetherbeei_contig13398.1.1|Name=mRNA_P-wetherbeei_contig13398.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1254bp|location=Sequence derived from alignment at P-wetherbeei_contig13398:594..1847- (Phaeothamnion wetherbeei SAG_119_79)
GTCATCGTCGATCACCACACGCAGAACGATCGGCTCGCCGACGCGGCACA
CGTGCTGGCCGAGGCGATGTACGCACTGGAGCGACTGCCGGACGACCCGG
CCGTGTTCCAGGTGATGCACAACTTGGCGGTGACGTACTCGCGCTGCGGG
TTCGTTCACGCCGCGCTGGAGCTCTACGACCGGGCGTTGCGTCTGGCCGA
CAACGAGGCCGACAAGCAGTTCACGTACTCGAACATGGCCGTCGCCTACC
ACTTCGCCGCGCTCGCCGAGCCCGACGATGCGGCACGCGACTCGCTGCTG
CACGACGGCCTCTACGCCGCGACCGCAGCCCTGGATCCGCAGGGCGGCGC
CGAGATCATGGCCACCGGACTGGCGATGGCACACCGTTCGATGATGCTCG
CCGAGATCGGTCACTTCGACGCCGCGCTGCGCGACGCGCAGCGGGCCCGA
GTGATCACGAGCGAGCACGGCATGCGCGAGGAGCAGGTCGCCGCAATGTG
CGGCGAAGTCGTGTCGCGCTGGGCCCTGTCGAGGGATGCCTCGGTGCTCG
ACCTGATCGCCGAAACGTACGACCTGGCCGCCGAGATCCACTTCGAAGAC
ATCCTGCAGCCGATCCGCGACGTCGAGGTGGACATCCTGTGGACGTTGGA
GAAGTTCGAGTGCGCACGCACGGCGATGCGGCGCAACACGCGCCAGTTGA
TGGCGCGCATCCACCAGGAGTCGTCAGCTCGTTGGGAGCACGTGCGCCTC
GGCGTCGAGCACAAGCGCGTCGAAGCGATCAGCGAGAGCGACCCGCTCAC
GGGTCTGCCGAACCGTCGCTACCTCGGCCACTGGTTGCCCGAGGTGTTCG
AGGAGCACCCGCCGGTGTGCGTCGGTGTGGTCGACCTCGACGGCTTCAAG
CAGATCAACGACGACTTCAACTACGAAGCCGGCGATCGCGTGCTGCAGGA
AGTGGCGACGCTGCTGGAACGCGTGTGCCGCCGCGGCGACGCCGTCGTGC
GCATCGGCGGCGACGAGTTCGTGATGGTGCTGCGCGAAGCGTCGCTGAAC
GACGCCCGTGTCGTGTTCGAACGCATCCGCCAGCTGATCGCCACGCACAC
GTGGAGCGGCCTGCCGCGCGACGTGACGCTCACCGCGTCCGTCGGTGTCG
CTGCCGGCAGCGGCTCCTTCGACTCAGCTCGTGTCTTGGCCGCCGCCACC
GAAGCGATGCAAGCCGCCAAACGAACCGGCCGCAACCGCATCACCTTCCA
CTGA
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