mRNA_P-wetherbeei_contig13375.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13375.1.1
Unique NamemRNA_P-wetherbeei_contig13375.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13375.1.1 vs. uniprot
Match: D8LF19_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF19_ECTSI)

HSP 1 Score: 403 bits (1036), Expect = 5.340e-134
Identity = 217/377 (57.56%), Postives = 268/377 (71.09%), Query Frame = 1
Query:    1 PAPWMTWDDTPFEGPLRKALLSAGFPSPTPTQAQSWPIALNRRDLISVARTGSGKTCGFLLPAFHMLSASADALPPRMGAPPKVLVLAPTRELAMQIETEARKFGRASAIRSTCVYGGAPKYPQIKALEGGVEVLIATPGRLNDLVNMNKVNLSNVRYLVLDEADRMLDMGFEPQIRSIIEALPKARPXXXXXXXXXXXXXXXXXXXXXPPVPGPLTAATGRQTLFFTATWPKAVQRLAATFVTDPVSVTMGAADGALRANAMITQHVRVVTEGDKLDVLRNVLRETHP--------KVLIFTSRKRTCDKIAERLWNWGYAVDSLHGDREQRERTEVMRRFRGGELRVIVATDVAARGLDVRDVAAVINFDMGPVE 1107
            P P  +++ TPF GP+R AL +AG+P+PTPTQAQSWPIAL+ RD+ISVARTGSGKT GFLLPAFH L        PRMG P  ++VLAPTRELA QI  EA KFG+A+ IRST VYGG+PKYPQIKA++ GV+V+IATPGRLND++ M K+N++NV  L LDEADRMLDMGFEPQIR+II+A+P  R                                   QTLFFTATWPK VQRLA  FVT+PV +T+G A G L AN  ITQH+ +V E DK D L  +L + H         K +IF+S+KR CDK+A+  W+ G+AVDSLHGDREQ ERT+VM ++R GE+R++VATDVAARGLDV+D++ VIN+D  PV+
Sbjct:  142 PVPMSSFESTPFGGPIRGALKAAGYPAPTPTQAQSWPIALSGRDIISVARTGSGKTLGFLLPAFHALLNRPGGCKPRMGGP-YIVVLAPTRELACQINEEATKFGKAAGIRSTTVYGGSPKYPQIKAIQSGVQVVIATPGRLNDIMEMGKINMTNVMTLALDEADRMLDMGFEPQIRTIIDAMPAKR-----------------------------------QTLFFTATWPKEVQRLARDFVTNPVHITVGDA-GKLNANKSITQHIHIVDERDKGDKLWELLTKLHENPPKADHGKTIIFSSKKRNCDKLAQAAWDRGFAVDSLHGDREQWERTKVMDQYRSGEVRMLVATDVAARGLDVKDISYVINYDF-PVD 480          
BLAST of mRNA_P-wetherbeei_contig13375.1.1 vs. uniprot
Match: A0A835YJ27_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ27_9STRA)

HSP 1 Score: 375 bits (962), Expect = 5.440e-124
Identity = 200/374 (53.48%), Postives = 257/374 (68.72%), Query Frame = 1
Query:    1 PAPWMTWDDTPFEGPLRKALLSAGFPSPTPTQAQSWPIALNRRDLISVARTGSGKTCGFLLPAFHMLSASADALPPRMGAPPKVLVLAPTRELAMQIETEARKFGRASAIRSTCVYGGAPKYPQIKALEGGVEVLIATPGRLNDLVNMNKVNLSNVRYLVLDEADRMLDMGFEPQIRSIIEALPKARPXXXXXXXXXXXXXXXXXXXXXPPVPGPLTAATGRQTLFFTATWPKAVQRLAATFVTDPVSVTMGAADGALRANAMITQHVRVVTEGDKLDVLRNVL--RET--------HPKVLIFTSRKRTCDKIAERLWNWGYAVDSLHGDREQRERTEVMRRFRGGELRVIVATDVAARGLDVRDVAAVINFD 1092
            P P +++   PF   ++ AL +AGF +PTPTQAQSWP+ L  RDLISVA+TGSGKT GFLLPAFH +           G  P +LVLAPTRELA QI  E+RKFGR + I+S C+YGGAPK+PQI+AL    +V+IATPGRLND+ NM K++L+NV +LVLDEADRMLDMGFEPQIR I+                                 G +   T RQTLFFTATWPK VQ+LA  F+++PV + +G+ D  L+AN  I+Q + V+ EGDK D L+ +L  R T        H K++IFT+RKRTCD+++ RLWN G++VD+LHGD+EQRERT VM +F+ G +R++VATDVAARGLDV+D+A VIN+D
Sbjct:   50 PNPVISFGAAPFHPSIKTALKAAGFAAPTPTQAQSWPVVLQGRDLISVAKTGSGKTLGFLLPAFHRMQEKKTQY--FKGKGPSILVLAPTRELACQIYDESRKFGRLADIKSCCLYGGAPKWPQIQALATDPQVVIATPGRLNDIANMRKISLANVEFLVLDEADRMLDMGFEPQIREIL---------------------------------GNMGPKTSRQTLFFTATWPKTVQKLAREFLSNPVQLNLGSGDS-LQANKSISQTIAVIGEGDKEDALKELLASRSTVDKEGVMEHGKIIIFTARKRTCDELSRRLWNGGFSVDALHGDKEQRERTSVMTKFKAGSIRMVVATDVAARGLDVKDIALVINYD 387          
BLAST of mRNA_P-wetherbeei_contig13375.1.1 vs. uniprot
Match: A0A0L0FLW3_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FLW3_9EUKA)

HSP 1 Score: 362 bits (928), Expect = 8.280e-118
Identity = 193/379 (50.92%), Postives = 248/379 (65.44%), Query Frame = 1
Query:    1 PAPWMTWDDTPFEGPLRKALLSAGFPSPTPTQAQSWPIALNRRDLISVARTGSGKTCGFLLPAFHMLSAS-----ADAL-PPRMGAPPKVLVLAPTRELAMQIETEARKFGRASAIRSTCVYGGAPKYPQIKALEGGVEVLIATPGRLNDLVNMNKVNLSNVRYLVLDEADRMLDMGFEPQIRSIIEALPKARPXXXXXXXXXXXXXXXXXXXXXPPVPGPLTAATGRQTLFFTATWPKAVQRLAATFVTDPVSVTMGAADGALRANAMITQHVRVVTEGDKLDVLRNVLRE---------THPKVLIFTSRKRTCDKIAERLWNWGYAVDSLHGDREQRERTEVMRRFRGGELRVIVATDVAARGLDVRDVAAVINFD 1092
            P P +TWD TPF G ++  L+++GFP PT +QA SWPI L  +D+I+VA+TGSGKT GFL+P FH +  S      D    PR G PPKVLVLAPTRELA QIE EA+KFG  + IRS C+YGGAPKYPQI+A+E G +V+IATPGRL D++ M K+++  +   +LDEADRMLDMGF PQI  I+E LPK +                                   QTLFFTATWPKAVQ+LA T + D V V  GA    L+AN  + Q++R+V    K D L+ +L E         +HPK++IFT+RK TC+ +  +LW  G+AVD LHGDREQ ERT +M+++   +LR++VATDVAARGLDVRD+  VIN+D
Sbjct:  122 PHPMLTWDSTPFSGKVKANLVASGFPGPTASQAMSWPIILGGQDIIAVAKTGSGKTLGFLVPCFHHIVTSKWNQGGDFRGQPRRGEPPKVLVLAPTRELACQIEAEAKKFGMTAGIRSVCLYGGAPKYPQIRAIEQGAQVIIATPGRLCDIMEMKKISVLGIECAILDEADRMLDMGFGPQITEIMEKLPKQK-----------------------------------QTLFFTATWPKAVQKLANTLLKDAVQVNFGAVHK-LQANKNVEQNIRIVDNHSKFDELKKLLTELSETEDAAKSHPKMIIFTARKHTCNDLGNQLWESGFAVDCLHGDREQFERTNIMKQYVANDLRMLVATDVAARGLDVRDIKVVINYD 464          
BLAST of mRNA_P-wetherbeei_contig13375.1.1 vs. uniprot
Match: A0A7S3H7A5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H7A5_9STRA)

HSP 1 Score: 361 bits (927), Expect = 9.250e-118
Identity = 198/372 (53.23%), Postives = 248/372 (66.67%), Query Frame = 1
Query:    1 PAPWMTWDDTPFEGPLRKALLSAGFPSPTPTQAQSWPIALNRRDLISVARTGSGKTCGFLLPAFHMLSASADALPPRMGAPPKVLVLAPTRELAMQIETEARKFGRASAIRSTCVYGGAPKYPQIKALEGGVEVLIATPGRLNDLVNMNKVNLSNVRYLVLDEADRMLDMGFEPQIRSIIEALPKARPXXXXXXXXXXXXXXXXXXXXXPPVPGPLTAATGRQTLFFTATWPKAVQRLAATFVTDPVSVTMGAADGALRANAMITQHVRVVTEGDKLDVLRNVLRETHP--------KVLIFTSRKRTCDKIAERLWNWGYAVDSLHGDREQRERTEVMRRFRGGELRVIVATDVAARGLDVRDVAAVINFD 1092
            PAP  ++  TPF  P+RKAL +AGFP+PTPTQAQSWPIAL+ RD+I+VA+TGSGKTCGFLLPAFH+L ++ +    R    P ++VLAPTRELA QIE EA KFGR S IRS C YGGAPK  QI+ ++ G+EVLI TPGRLNDL+ M  VNL  V +LVLDEADRMLDMGFEPQIR+II  +P  R                                   Q+LFFTATWP+ VQ LA  F+  PV +  G  +  L AN  I Q + V ++ +K D L+ VL+E +P        K +IF SRK  CD++A  LW+ GY+VD+LHGD++Q  RT VM  F+ G+LR++VATDVAARGLDV+D+  VIN+D
Sbjct:  115 PAPMTSFASTPFAPPIRKALDAAGFPNPTPTQAQSWPIALSGRDIITVAKTGSGKTCGFLLPAFHLLLSAFEK--GRKRGAPAIVVLAPTRELACQIEEEAIKFGRTSNIRSVCAYGGAPKSLQIRKIQAGIEVLICTPGRLNDLLEMGVVNLGQVLFLVLDEADRMLDMGFEPQIRTIISKIPLER-----------------------------------QSLFFTATWPREVQTLAREFLKTPVELKFGDVNN-LNANKAILQKIIVCSDNEKSDKLKEVLKEINPDNKPEEVPKSIIFVSRKSDCDRLANTLWDAGYSVDALHGDKQQFLRTRVMDNFKAGKLRLLVATDVAARGLDVKDIQVVINYD 448          
BLAST of mRNA_P-wetherbeei_contig13375.1.1 vs. uniprot
Match: B8BR52_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BR52_THAPS)

HSP 1 Score: 356 bits (913), Expect = 1.120e-116
Identity = 191/366 (52.19%), Postives = 247/366 (67.49%), Query Frame = 1
Query:    1 PAPWMTWDDTPFEGPLRKALLSAGFPSPTPTQAQSWPIALNRRDLISVARTGSGKTCGFLLPAFHMLSASADALPPRMGAPPKVLVLAPTRELAMQIETEARKFGRASAIRSTCVYGGAPKYPQIKALEGGVEVLIATPGRLNDLVNMNKVNLSNVRYLVLDEADRMLDMGFEPQIRSIIEALPKARPXXXXXXXXXXXXXXXXXXXXXPPVPGPLTAATGRQTLFFTATWPKAVQRLAATFVTDPVSVTMGAADGALRANAMITQHVRVVTEGDKLDVLRNVLRET-HPKVLIFTSRKRTCDKIAERLWNWGYAVDSLHGDREQRERTEVMRRFRGGELRVIVATDVAARGLDVRDVAAVINFDM 1095
            P P++ + D PF   ++K L SAGF  PT  Q+Q+WPIA+N  D+I VA+TGSGKTCGFLLP+FH    S  A   + G  P +LVLAPTRELA QI  E +KFGR   IRS C YGG+PKY QI ALE GVE +IATPGRLNDL+ M K NLSNV+++VLDEADRMLDMGFEPQIRSI+ ++P +                                 T RQTL F+ATWPK +QRLA  F++DP+ + +G  +  L AN  ITQ + + +E DK+D L+ +L +  H KV++F  +K    ++A +LW+ G+AVDSLHGDREQ ERT+V+  F+ G LR+++ATDVAARGLDV+DV  V+N+DM
Sbjct:   42 PDPFIEFGDAPFSDSIQKTLKSAGFERPTFIQSQAWPIAINGSDMICVAKTGSGKTCGFLLPSFHQYFQS-KATANKGGKGPIMLVLAPTRELACQILDETQKFGRPIGIRSVCCYGGSPKYAQIAALERGVECVIATPGRLNDLIEMKKANLSNVKFVVLDEADRMLDMGFEPQIRSIMGSVPDS---------------------------------TNRQTLLFSATWPKEIQRLAFDFLSDPIQINVGEIN-VLNANKDITQKIMMCSEDDKIDRLKEILTDLKHSKVIVFVGKKYVAHELANQLWDEGFAVDSLHGDREQWERTKVINAFKQGTLRLLIATDVAARGLDVKDVGVVVNYDM 372          
BLAST of mRNA_P-wetherbeei_contig13375.1.1 vs. uniprot
Match: B7S475_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7S475_PHATC)

HSP 1 Score: 347 bits (891), Expect = 3.910e-112
Identity = 188/366 (51.37%), Postives = 242/366 (66.12%), Query Frame = 1
Query:    1 PAPWMTWDDTPFEGPLRKALLSAGFPSPTPTQAQSWPIALNRRDLISVARTGSGKTCGFLLPAFHMLSASADALPPRMGAPPKVLVLAPTRELAMQIETEARKFGRASAIRSTCVYGGAPKYPQIKALEGGVEVLIATPGRLNDLVNMNKVNLSNVRYLVLDEADRMLDMGFEPQIRSIIEALPKARPXXXXXXXXXXXXXXXXXXXXXPPVPGPLTAATGRQTLFFTATWPKAVQRLAATFVTDPVSVTMGAADGALRANAMITQHVRVVTEGDKLDVLRNVLRET-HPKVLIFTSRKRTCDKIAERLWNWGYAVDSLHGDREQRERTEVMRRFRGGELRVIVATDVAARGLDVRDVAAVINFDM 1095
            P P+M + D PF+  +++A   AGF  PT  Q Q+WPIAL  +D+I VA+TGSGKTCGFLLP FH        +  +    P +LVLAPTREL++QI  EA+KFGR   IRS C YGGA K+PQI AL+ GVE +IATPGRLNDL+ M K +LS V+YLVLDEADRMLDMGFEPQIRSII  +P                                     RQTL F+ATWPK +Q LA  F+ +P+ + +G  + AL AN  I Q + + +E +KLD L  +LR+  H K+++F ++K +C+ +A RLW  G+AVDSLHGDR Q ERT VM+ F+GG+LRV++ATDVAARGLDV+DV  V+N+DM
Sbjct:  134 PDPFMEFKDAPFQERIQQAFAQAGFARPTSIQGQAWPIALQNKDMICVAKTGSGKTCGFLLPVFHQHLVKQTRI--QGFTKPILLVLAPTRELSVQILEEAQKFGRPLGIRSVCCYGGASKHPQIAALQRGVECVIATPGRLNDLIEMRKADLSKVQYLVLDEADRMLDMGFEPQIRSIILNIPPEN----------------------------------RQTLLFSATWPKEIQALAHDFLKNPIQINVGEVN-ALVANKDIQQTIVMCSESEKLDKLEQILRDLMHGKIIVFVAKKISCNDLANRLWEDGFAVDSLHGDRPQWERTRVMQAFKGGQLRVLIATDVAARGLDVKDVGVVVNYDM 462          
BLAST of mRNA_P-wetherbeei_contig13375.1.1 vs. uniprot
Match: A0A7S0BVZ7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BVZ7_9STRA)

HSP 1 Score: 347 bits (890), Expect = 2.120e-111
Identity = 190/401 (47.38%), Postives = 243/401 (60.60%), Query Frame = 1
Query:    1 PAPWMTWDDTPFEGPLRKALLSAGFPSPTPTQAQSWPIALNRRDLISVARTGSGKTCGFLLPAFHMLSASADALPPRM--------------------------GAPPKVLVLAPTRELAMQIETEARKFGRASAIRSTCVYGGAPKYPQIKALEGGVEVLIATPGRLNDLVNMNKVNLSNVRYLVLDEADRMLDMGFEPQIRSIIEALPKARPXXXXXXXXXXXXXXXXXXXXXPPVPGPLTAATGRQTLFFTATWPKAVQRLAATFVTDPVSVTMGAADGALRANAMITQHVRVVTEGDKLDVLRNVLRET----------HPKVLIFTSRKRTCDKIAERLWNWGYAVDSLHGDREQRERTEVMRRFRGGELRVIVATDVAARGLDVRDVAAVINFDM 1095
            P P+  + D PF   +++AL SAGF  PT  QAQ+WPIALN  D+I VA+TGSGKTCGFLLP+ H    S   L P                            G  P +LVLAPTRELA+QIE E +KFGR+  +RS C+YGGAPKYPQI+AL  GV+ +IATPGR+NDL+ M + +LS ++++VLDEADRMLDMGFEPQIRS++E +P+ R                                   QTL F+ATWPK +QRLA  F+  P+ V +G  +  L AN  I Q++ +  E +K      +L+E           H KV+IF SRK +CD +A  LW  G+AVDSLHGDR Q ERT+VM  F+ G LRV++ATDVA+RGLDV+DV  V+NFDM
Sbjct:  144 PTPFYNFSDAPFNATIQRALTSAGFEKPTAIQAQAWPIALNGDDMICVAKTGSGKTCGFLLPSMHQYLKSGPNLTPASTGGRGSXXXXXXXXXXXXXXXXXXXXGTKPVLLVLAPTRELAVQIEEECKKFGRSVGLRSICLYGGAPKYPQIQALNRGVDFVIATPGRINDLIEMGRCDLSAIQFVVLDEADRMLDMGFEPQIRSVLEHVPEKR-----------------------------------QTLLFSATWPKEIQRLAYDFLNTPIQVNVGDVNS-LNANKDIKQNIHICMESEKFTKCTGLLKEMTSEENGGKEKHAKVIIFVSRKMSCDSLANELWEDGFAVDSLHGDRAQWERTKVMNAFKAGTLRVLIATDVASRGLDVKDVGVVVNFDM 508          
BLAST of mRNA_P-wetherbeei_contig13375.1.1 vs. uniprot
Match: A0A7S4A8S3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A8S3_9STRA)

HSP 1 Score: 342 bits (878), Expect = 6.860e-110
Identity = 186/385 (48.31%), Postives = 242/385 (62.86%), Query Frame = 1
Query:    7 PWMTWDDTPFEGPLRKALLSAGFPSPTPTQAQSWPIALNRRDLISVARTGSGKTCGFLLPAFHMLSASADALPPRMG--APPKVLVLAPTRELAMQIETEARKFGRASAIRSTCVYGGAPKYPQIKALEGGVEVLIATPGRLNDLVNMNKVNLSNVRYLVLDEADRMLDMGFEPQIRSIIEALPKARPXXXXXXXXXXXXXXXXXXXXXPPVPGPLTAATGRQTLFFTATWPKAVQRLAATFVTDPVSVTMGAADGALRANAMITQHVRVVTEGDKLDVLRNVLRE--------------------THPKVLIFTSRKRTCDKIAERLWNWGYAVDSLHGDREQRERTEVMRRFRGGELRVIVATDVAARGLDVRDVAAVINFDM 1095
            P++ + D PF   ++K L +AGF  PT  QAQ+WP+A+  +DLIS+A+TGSGKTCGFLLP FH    +      R G  A P +LVLAPTREL +QI  E+RKFG    +RS C YGG+ KYPQI+AL+ GVE +IA PGRLNDL+ M K +LS ++YLVLDEADRMLDMGFEPQIRSI+E                                   T A  RQTL F+ATWPK +QRLA  F+ DPV + +G  + AL AN  I Q + ++ E DK+  L ++L+E                     H KV++F +RK +C+ +A +LW  G+AVD LHGDR Q ER++VM  F+ G LR+++ATDVAARGLDV+DV  V+N+DM
Sbjct:  137 PYIDFSDAPFSDRIQKTLAAAGFARPTAIQAQAWPLAVEGKDLISIAKTGSGKTCGFLLPVFHDYEKTRSG---RSGGYAKPSLLVLAPTRELCVQISEESRKFGNPLGVRSVCCYGGSSKYPQIQALQRGVECIIACPGRLNDLIEMRKCDLSGIKYLVLDEADRMLDMGFEPQIRSIVEK----------------------------------TNAATRQTLLFSATWPKEIQRLAHDFLKDPVQINVGEVN-ALVANKDIKQTIHMINEDDKIAKLESILKELTANASGDDDKKTGVANGGKAHDKVIVFVARKFSCNDLANKLWEDGFAVDCLHGDRPQWERSKVMNAFKAGALRMLIATDVAARGLDVKDVGVVVNYDM 483          
BLAST of mRNA_P-wetherbeei_contig13375.1.1 vs. uniprot
Match: A0A1V9ZNA6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZNA6_9STRA)

HSP 1 Score: 338 bits (867), Expect = 1.120e-109
Identity = 183/379 (48.28%), Postives = 243/379 (64.12%), Query Frame = 1
Query:    1 PAPWMTWDDTPFEGPLRKALLSAGFPSPTPTQAQSWPIALNRRDLISVARTGSGKTCGFLLPAFHMLSASADALPPRMGAPPKVLVLAPTRELAMQIETEARKFGRASA-IRSTCVYGGAPKYPQIKALEGGVEVLIATPGRLNDLVNMNKVNLSNVRYLVLDEADRMLDMGFEPQIRSIIEALPKARPXXXXXXXXXXXXXXXXXXXXXPPVPGPLTAATGRQTLFFTATWPKAVQRLAATFVTDPVSVTMGAADGALRANAMITQHVRVVTEGDKLDVLRNVLRE-------------THPKVLIFTSRKRTCDKIAERLWNWGYAVDSLHGDREQRERTEVMRRFRGGELRVIVATDVAARGLDVRDVAAVINFDM 1095
            P P +++ DTPF   ++ +L  AG+ +PTPTQAQSWPIAL ++D+ISVA+TGSGKT GFLLP+FH +S        + G  P++LVLAPTRELA QIE EA+KF RA   +R+TCV+GGAPKY QI+ +E G++ L+A PGRL+DL+ M KV+L  +  LVLDEADRMLDMGFEPQIR+I+E +P  R                                   QTL F+ATWPKA+Q+LA  F+ +PV V MG  D  L+AN  I Q V ++ E +K D L  ++ +              H K ++F   KR+CD++A+  W  GYAV  LHGD +Q +RT  M +F+ G L+++ ATDVAARGLDV+DV  VIN+DM
Sbjct:   56 PDPILSFKDTPFSTDIQTSLTKAGYTAPTPTQAQSWPIALTKQDMISVAKTGSGKTVGFLLPSFHHISKG------KAGHHPRILVLAPTRELATQIEAEAKKFSRAKPYVRTTCVFGGAPKYNQIRQIEQGIDCLVACPGRLSDLITMKKVSLEAIEILVLDEADRMLDMGFEPQIRAIVENIPDQR-----------------------------------QTLLFSATWPKAIQKLARAFLKNPVQVNMGNID-VLQANTDIVQSVDIIREDEKNDKLIELMNKIVKMEDPNNTDLTNHIKTIVFFRTKRSCDRLAQEYWQHGYAVGCLHGDMDQHQRTLTMNQFKQGTLKILFATDVAARGLDVKDVGIVINYDM 392          
BLAST of mRNA_P-wetherbeei_contig13375.1.1 vs. uniprot
Match: A0A7S2PL85_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PL85_9STRA)

HSP 1 Score: 337 bits (863), Expect = 3.420e-109
Identity = 186/396 (46.97%), Postives = 251/396 (63.38%), Query Frame = 1
Query:    7 PWMTWDDTPFEGPLRKALLSAGFPSPTPTQAQSWPIALNRRDLISVARTGSGKTCGFLLPAFHMLSASADALPPRMGAP---PKVLVLAPTRELAMQIETEARKFGRASAIRSTCVYGGAPKYPQIKALEGGVEVLIATPGRLNDLVNMNKVNLSNVRYLVLDEADRMLDMGFEPQIRSIIEALPKARPXXXXXXXXXXXXXXXXXXXXXPPVPGPLTAATGRQTLFFTATWPKAVQRLAATFVTDPVSVTMGAADGALRANAMITQHVRVVTEGDKLDVLRNVLRET------------------------------HPKVLIFTSRKRTCDKIAERLWNWGYAVDSLHGDREQRERTEVMRRFRGGELRVIVATDVAARGLDVRDVAAVINFDM 1095
            P++ +DD PF   ++K L +AGF  PT  Q+Q+WPIAL   DLIS+A+TGSGKTCGFLLPAFH    +  A  P  G     P ++VLAPTRELA+QI  E +KFGR   IRS C YGG+PKYPQI+AL+ GVE +IATPGR+NDL+ M K +LS V+++VLDEADRMLDMGFEPQIRSI+  +P+A                                 T RQTL F+ATWPK +Q+LA  F+ +PV + +G  + AL AN  ITQ++ ++++ +KLD L+ +L +                               H K+++F ++K    ++A +LW+ G+A DSLHGDR Q ERT+V+  F+ G LR+++ATDVAARGLDV+DV AV+N+DM
Sbjct:   33 PFIEFDDAPFNPVIQKTLKAAGFERPTLIQSQAWPIALQGTDLISIAKTGSGKTCGFLLPAFHNFLQTKGA--PGNGRNFQGPMMIVLAPTRELAIQILDETQKFGRPIGIRSVCCYGGSPKYPQIQALQRGVECIIATPGRINDLIEMRKADLSGVKFVVLDEADRMLDMGFEPQIRSILSNVPEA---------------------------------TKRQTLLFSATWPKEIQKLAFDFLNEPVQINVGEVN-ALNANKDITQNIIMLSDDEKLDKLKEILTQLVDSADESEEKSAPAPTGRFAPKPVDLGGKKHAKIIVFVAKKYVAHELANQLWDDGFACDSLHGDRAQWERTKVIGAFKEGTLRMLIATDVAARGLDVKDVGAVVNYDM 392          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13375.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF19_ECTSI5.340e-13457.56DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835YJ27_9STRA5.440e-12453.48P-loop containing nucleoside triphosphate hydrolas... [more]
A0A0L0FLW3_9EUKA8.280e-11850.92Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A7S3H7A5_9STRA9.250e-11853.23Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
B8BR52_THAPS1.120e-11652.19Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
B7S475_PHATC3.910e-11251.37Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S0BVZ7_9STRA2.120e-11147.38Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S4A8S3_9STRA6.860e-11048.31Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A1V9ZNA6_9STRA1.120e-10948.28Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A7S2PL85_9STRA3.420e-10946.97Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13375contigP-wetherbeei_contig13375:219..1776 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LF19
PFAMsDEAD,Helicase_C,WW
Model size1107
Max annot lvl2759|Eukaryota
KEGG rclassRC02795
KEGG koko:K02325,ko:K12823
KEGG ReactionR00375,R00376,R00377,R00378
KEGG Pathwayko00230,ko00240,ko01100,ko03030,ko03040,ko03410,ko03420,ko05166,ko05202,ko05205,map00230,map00240,map01100,map03030,map03040,map03410,map03420,map05166,map05202,map05205
KEGG ModuleM00263
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0004672,GO:0004674,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005773,GO:0005829,GO:0006139,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006970,GO:0006972,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009628,GO:0009651,GO:0009987,GO:0010501,GO:0016070,GO:0016301,GO:0016310,GO:0016462,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0031974,GO:0031981,GO:0034641,GO:0036211,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046777,GO:0050896,GO:0070013,GO:0070035,GO:0071704,GO:0090304,GO:0140096,GO:0140098,GO:1901360,GO:1901564
Exons3
Evalue3.44e-133
EggNOG OGsCOG0513@1|root,KOG0331@2759|Eukaryota
Ec32 ortholog descriptionDEAD box helicase
Ec32 orthologEc-21_006390.1
EC2.7.7.7,3.6.4.13
Descriptionhelicase activity
Cds size1095
COG categoryL
BRITEko00000,ko00001,ko00002,ko01000,ko03009,ko03032,ko03041,ko03400
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185982.9777884-UTR-P-wetherbeei_contig13375:218..2301683185982.9777884-UTR-P-wetherbeei_contig13375:218..230Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig13375 219..230 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185982.989381-CDS-P-wetherbeei_contig13375:230..6681683185982.989381-CDS-P-wetherbeei_contig13375:230..668Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13375 231..668 +
1683185983.0018666-CDS-P-wetherbeei_contig13375:1011..14191683185983.0018666-CDS-P-wetherbeei_contig13375:1011..1419Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13375 1012..1419 +
1683185983.0162392-CDS-P-wetherbeei_contig13375:1527..17761683185983.0162392-CDS-P-wetherbeei_contig13375:1527..1776Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13375 1528..1776 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13375.1.1prot_P-wetherbeei_contig13375.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13375 231..1776 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13375.1.1

>prot_P-wetherbeei_contig13375.1.1 ID=prot_P-wetherbeei_contig13375.1.1|Name=mRNA_P-wetherbeei_contig13375.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=365bp
MTWDDTPFEGPLRKALLSAGFPSPTPTQAQSWPIALNRRDLISVARTGSG
KTCGFLLPAFHMLSASADALPPRMGAPPKVLVLAPTRELAMQIETEARKF
GRASAIRSTCVYGGAPKYPQIKALEGGVEVLIATPGRLNDLVNMNKVNLS
NVRYLVLDEADRMLDMGFEPQIRSIIEALPKARPAGTAAAASAAADAAAA
AGKAAPPVPGPLTAATGRQTLFFTATWPKAVQRLAATFVTDPVSVTMGAA
DGALRANAMITQHVRVVTEGDKLDVLRNVLRETHPKVLIFTSRKRTCDKI
AERLWNWGYAVDSLHGDREQRERTEVMRRFRGGELRVIVATDVAARGLDV
RDVAAVINFDMGPVE
back to top

mRNA from alignment at P-wetherbeei_contig13375:219..1776+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13375.1.1 ID=mRNA_P-wetherbeei_contig13375.1.1|Name=mRNA_P-wetherbeei_contig13375.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1558bp|location=Sequence derived from alignment at P-wetherbeei_contig13375:219..1776+ (Phaeothamnion wetherbeei SAG_119_79)
CCCGCCCCATGGATGACGTGGGACGACACGCCCTTTGAGGGGCCGCTTCG CAAGGCGCTCCTCTCGGCCGGCTTCCCGTCACCGACGCCGACGCAGGCCC AGAGCTGGCCGATCGCGCTCAACCGCCGCGATCTCATCAGCGTCGCACGC ACCGGCTCCGGCAAGACCTGCGGCTTTCTGCTGCCAGCCTTCCACATGCT GAGCGCGTCCGCCGACGCGCTGCCGCCGCGCATGGGCGCCCCGCCCAAGG TGCTGGTGCTTGCGCCGACGCGGGAGCTGGCGATGCAGATTGAGACGGAG GCGCGCAAGTTCGGCCGCGCGAGCGCAATCCGGTCAACATGCGTCTACGG TGGCGCGCCCAAGTACCCGCAGATCAAGGCGCTGGAGGGCGGCGTTGAAG TGCTCATCGCGACGCCTGGCCGCCTCAACGACCTCGTCAACATGAACAAG GTGTGGGAGGGAGGGCTGTTTAAGGGTAGGAAGGAGCGAAACCGGGTGTC TCTTTTGACAAGCCCCTGCCTCCGTCTTCTCATCTTTTCTGTCTTTTGTC CTTCTACGTGTGTGCTCTGTTGAGGTGCCCTTTTCTTCGAGGTTACCTAA AATTTTCTCTATCGGATGATACGCATGATCTACCGCATGTGGACCGTTAC TATTTATCAGCGTGTGCCGCGGTCGTGGCTCAGGTTCCTTCCCTCCCCTC CTCCCAGCATCTGTCTGACACTCCCAACGTCTTTCCACCGCCTCCTACCT GTGCCTTCCCTATATCTCTTTCTCCGCACTCGCCTTGTCTCAGGTGAACC TGTCGAACGTGCGCTACCTGGTGCTGGACGAGGCGGACCGCATGCTCGAC ATGGGCTTCGAGCCCCAGATCCGCTCCATCATTGAGGCGCTGCCCAAAGC CCGCCCCGCAGGCACCGCAGCCGCCGCTTCAGCCGCCGCCGACGCCGCTG CCGCCGCGGGTAAGGCCGCCCCGCCGGTGCCGGGGCCGCTGACGGCCGCC ACCGGCAGGCAGACGCTCTTCTTCACGGCGACATGGCCCAAGGCAGTGCA GCGGCTGGCGGCAACCTTCGTGACGGACCCGGTGTCAGTGACGATGGGCG CGGCAGACGGCGCGCTGCGAGCCAACGCCATGATCACGCAGCACGTGCGC GTCGTGACGGAGGGCGACAAGCTCGACGTCCTGCGCAACGTGCTTCGTGA GGTCTGCAGCGACAACACACCCGACAAGGGCGCCGCGTCGGCGTCGACGG GCGGGCCAACGGCCGCGGAGGCGGCGGCGGCGACGGCGGCGGCCGCGGCG GCGGCGAAGACGCACCCGAAGGTGCTCATCTTCACAAGCCGCAAGCGAAC GTGCGACAAGATTGCCGAGCGGCTCTGGAACTGGGGCTACGCCGTCGACT CGCTGCACGGGGACCGCGAGCAGCGGGAGCGAACGGAGGTCATGCGGCGG TTCCGCGGCGGCGAGCTGCGCGTCATTGTTGCGACGGACGTCGCTGCGCG CGGGCTGGATGTTCGGGATGTGGCTGCGGTCATCAACTTTGACATGGGGC CCGTCGAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig13375:219..1776+

>mRNA_P-wetherbeei_contig13375.1.1 ID=mRNA_P-wetherbeei_contig13375.1.1|Name=mRNA_P-wetherbeei_contig13375.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1095bp|location=Sequence derived from alignment at P-wetherbeei_contig13375:219..1776+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACGTGGGACGACACGCCCTTTGAGGGGCCGCTTCGCAAGGCGCTCCT
CTCGGCCGGCTTCCCGTCACCGACGCCGACGCAGGCCCAGAGCTGGCCGA
TCGCGCTCAACCGCCGCGATCTCATCAGCGTCGCACGCACCGGCTCCGGC
AAGACCTGCGGCTTTCTGCTGCCAGCCTTCCACATGCTGAGCGCGTCCGC
CGACGCGCTGCCGCCGCGCATGGGCGCCCCGCCCAAGGTGCTGGTGCTTG
CGCCGACGCGGGAGCTGGCGATGCAGATTGAGACGGAGGCGCGCAAGTTC
GGCCGCGCGAGCGCAATCCGGTCAACATGCGTCTACGGTGGCGCGCCCAA
GTACCCGCAGATCAAGGCGCTGGAGGGCGGCGTTGAAGTGCTCATCGCGA
CGCCTGGCCGCCTCAACGACCTCGTCAACATGAACAAGGTGAACCTGTCG
AACGTGCGCTACCTGGTGCTGGACGAGGCGGACCGCATGCTCGACATGGG
CTTCGAGCCCCAGATCCGCTCCATCATTGAGGCGCTGCCCAAAGCCCGCC
CCGCAGGCACCGCAGCCGCCGCTTCAGCCGCCGCCGACGCCGCTGCCGCC
GCGGGTAAGGCCGCCCCGCCGGTGCCGGGGCCGCTGACGGCCGCCACCGG
CAGGCAGACGCTCTTCTTCACGGCGACATGGCCCAAGGCAGTGCAGCGGC
TGGCGGCAACCTTCGTGACGGACCCGGTGTCAGTGACGATGGGCGCGGCA
GACGGCGCGCTGCGAGCCAACGCCATGATCACGCAGCACGTGCGCGTCGT
GACGGAGGGCGACAAGCTCGACGTCCTGCGCAACGTGCTTCGTGAGACGC
ACCCGAAGGTGCTCATCTTCACAAGCCGCAAGCGAACGTGCGACAAGATT
GCCGAGCGGCTCTGGAACTGGGGCTACGCCGTCGACTCGCTGCACGGGGA
CCGCGAGCAGCGGGAGCGAACGGAGGTCATGCGGCGGTTCCGCGGCGGCG
AGCTGCGCGTCATTGTTGCGACGGACGTCGCTGCGCGCGGGCTGGATGTT
CGGGATGTGGCTGCGGTCATCAACTTTGACATGGGGCCCGTCGAG
back to top