mRNA_P-wetherbeei_contig13375.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13375.1.1 vs. uniprot
Match: D8LF19_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF19_ECTSI) HSP 1 Score: 403 bits (1036), Expect = 5.340e-134 Identity = 217/377 (57.56%), Postives = 268/377 (71.09%), Query Frame = 1
Query: 1 PAPWMTWDDTPFEGPLRKALLSAGFPSPTPTQAQSWPIALNRRDLISVARTGSGKTCGFLLPAFHMLSASADALPPRMGAPPKVLVLAPTRELAMQIETEARKFGRASAIRSTCVYGGAPKYPQIKALEGGVEVLIATPGRLNDLVNMNKVNLSNVRYLVLDEADRMLDMGFEPQIRSIIEALPKARPXXXXXXXXXXXXXXXXXXXXXPPVPGPLTAATGRQTLFFTATWPKAVQRLAATFVTDPVSVTMGAADGALRANAMITQHVRVVTEGDKLDVLRNVLRETHP--------KVLIFTSRKRTCDKIAERLWNWGYAVDSLHGDREQRERTEVMRRFRGGELRVIVATDVAARGLDVRDVAAVINFDMGPVE 1107
P P +++ TPF GP+R AL +AG+P+PTPTQAQSWPIAL+ RD+ISVARTGSGKT GFLLPAFH L PRMG P ++VLAPTRELA QI EA KFG+A+ IRST VYGG+PKYPQIKA++ GV+V+IATPGRLND++ M K+N++NV L LDEADRMLDMGFEPQIR+II+A+P R QTLFFTATWPK VQRLA FVT+PV +T+G A G L AN ITQH+ +V E DK D L +L + H K +IF+S+KR CDK+A+ W+ G+AVDSLHGDREQ ERT+VM ++R GE+R++VATDVAARGLDV+D++ VIN+D PV+
Sbjct: 142 PVPMSSFESTPFGGPIRGALKAAGYPAPTPTQAQSWPIALSGRDIISVARTGSGKTLGFLLPAFHALLNRPGGCKPRMGGP-YIVVLAPTRELACQINEEATKFGKAAGIRSTTVYGGSPKYPQIKAIQSGVQVVIATPGRLNDIMEMGKINMTNVMTLALDEADRMLDMGFEPQIRTIIDAMPAKR-----------------------------------QTLFFTATWPKEVQRLARDFVTNPVHITVGDA-GKLNANKSITQHIHIVDERDKGDKLWELLTKLHENPPKADHGKTIIFSSKKRNCDKLAQAAWDRGFAVDSLHGDREQWERTKVMDQYRSGEVRMLVATDVAARGLDVKDISYVINYDF-PVD 480
BLAST of mRNA_P-wetherbeei_contig13375.1.1 vs. uniprot
Match: A0A835YJ27_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ27_9STRA) HSP 1 Score: 375 bits (962), Expect = 5.440e-124 Identity = 200/374 (53.48%), Postives = 257/374 (68.72%), Query Frame = 1
Query: 1 PAPWMTWDDTPFEGPLRKALLSAGFPSPTPTQAQSWPIALNRRDLISVARTGSGKTCGFLLPAFHMLSASADALPPRMGAPPKVLVLAPTRELAMQIETEARKFGRASAIRSTCVYGGAPKYPQIKALEGGVEVLIATPGRLNDLVNMNKVNLSNVRYLVLDEADRMLDMGFEPQIRSIIEALPKARPXXXXXXXXXXXXXXXXXXXXXPPVPGPLTAATGRQTLFFTATWPKAVQRLAATFVTDPVSVTMGAADGALRANAMITQHVRVVTEGDKLDVLRNVL--RET--------HPKVLIFTSRKRTCDKIAERLWNWGYAVDSLHGDREQRERTEVMRRFRGGELRVIVATDVAARGLDVRDVAAVINFD 1092
P P +++ PF ++ AL +AGF +PTPTQAQSWP+ L RDLISVA+TGSGKT GFLLPAFH + G P +LVLAPTRELA QI E+RKFGR + I+S C+YGGAPK+PQI+AL +V+IATPGRLND+ NM K++L+NV +LVLDEADRMLDMGFEPQIR I+ G + T RQTLFFTATWPK VQ+LA F+++PV + +G+ D L+AN I+Q + V+ EGDK D L+ +L R T H K++IFT+RKRTCD+++ RLWN G++VD+LHGD+EQRERT VM +F+ G +R++VATDVAARGLDV+D+A VIN+D
Sbjct: 50 PNPVISFGAAPFHPSIKTALKAAGFAAPTPTQAQSWPVVLQGRDLISVAKTGSGKTLGFLLPAFHRMQEKKTQY--FKGKGPSILVLAPTRELACQIYDESRKFGRLADIKSCCLYGGAPKWPQIQALATDPQVVIATPGRLNDIANMRKISLANVEFLVLDEADRMLDMGFEPQIREIL---------------------------------GNMGPKTSRQTLFFTATWPKTVQKLAREFLSNPVQLNLGSGDS-LQANKSISQTIAVIGEGDKEDALKELLASRSTVDKEGVMEHGKIIIFTARKRTCDELSRRLWNGGFSVDALHGDKEQRERTSVMTKFKAGSIRMVVATDVAARGLDVKDIALVINYD 387
BLAST of mRNA_P-wetherbeei_contig13375.1.1 vs. uniprot
Match: A0A0L0FLW3_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FLW3_9EUKA) HSP 1 Score: 362 bits (928), Expect = 8.280e-118 Identity = 193/379 (50.92%), Postives = 248/379 (65.44%), Query Frame = 1
Query: 1 PAPWMTWDDTPFEGPLRKALLSAGFPSPTPTQAQSWPIALNRRDLISVARTGSGKTCGFLLPAFHMLSAS-----ADAL-PPRMGAPPKVLVLAPTRELAMQIETEARKFGRASAIRSTCVYGGAPKYPQIKALEGGVEVLIATPGRLNDLVNMNKVNLSNVRYLVLDEADRMLDMGFEPQIRSIIEALPKARPXXXXXXXXXXXXXXXXXXXXXPPVPGPLTAATGRQTLFFTATWPKAVQRLAATFVTDPVSVTMGAADGALRANAMITQHVRVVTEGDKLDVLRNVLRE---------THPKVLIFTSRKRTCDKIAERLWNWGYAVDSLHGDREQRERTEVMRRFRGGELRVIVATDVAARGLDVRDVAAVINFD 1092
P P +TWD TPF G ++ L+++GFP PT +QA SWPI L +D+I+VA+TGSGKT GFL+P FH + S D PR G PPKVLVLAPTRELA QIE EA+KFG + IRS C+YGGAPKYPQI+A+E G +V+IATPGRL D++ M K+++ + +LDEADRMLDMGF PQI I+E LPK + QTLFFTATWPKAVQ+LA T + D V V GA L+AN + Q++R+V K D L+ +L E +HPK++IFT+RK TC+ + +LW G+AVD LHGDREQ ERT +M+++ +LR++VATDVAARGLDVRD+ VIN+D
Sbjct: 122 PHPMLTWDSTPFSGKVKANLVASGFPGPTASQAMSWPIILGGQDIIAVAKTGSGKTLGFLVPCFHHIVTSKWNQGGDFRGQPRRGEPPKVLVLAPTRELACQIEAEAKKFGMTAGIRSVCLYGGAPKYPQIRAIEQGAQVIIATPGRLCDIMEMKKISVLGIECAILDEADRMLDMGFGPQITEIMEKLPKQK-----------------------------------QTLFFTATWPKAVQKLANTLLKDAVQVNFGAVHK-LQANKNVEQNIRIVDNHSKFDELKKLLTELSETEDAAKSHPKMIIFTARKHTCNDLGNQLWESGFAVDCLHGDREQFERTNIMKQYVANDLRMLVATDVAARGLDVRDIKVVINYD 464
BLAST of mRNA_P-wetherbeei_contig13375.1.1 vs. uniprot
Match: A0A7S3H7A5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H7A5_9STRA) HSP 1 Score: 361 bits (927), Expect = 9.250e-118 Identity = 198/372 (53.23%), Postives = 248/372 (66.67%), Query Frame = 1
Query: 1 PAPWMTWDDTPFEGPLRKALLSAGFPSPTPTQAQSWPIALNRRDLISVARTGSGKTCGFLLPAFHMLSASADALPPRMGAPPKVLVLAPTRELAMQIETEARKFGRASAIRSTCVYGGAPKYPQIKALEGGVEVLIATPGRLNDLVNMNKVNLSNVRYLVLDEADRMLDMGFEPQIRSIIEALPKARPXXXXXXXXXXXXXXXXXXXXXPPVPGPLTAATGRQTLFFTATWPKAVQRLAATFVTDPVSVTMGAADGALRANAMITQHVRVVTEGDKLDVLRNVLRETHP--------KVLIFTSRKRTCDKIAERLWNWGYAVDSLHGDREQRERTEVMRRFRGGELRVIVATDVAARGLDVRDVAAVINFD 1092
PAP ++ TPF P+RKAL +AGFP+PTPTQAQSWPIAL+ RD+I+VA+TGSGKTCGFLLPAFH+L ++ + R P ++VLAPTRELA QIE EA KFGR S IRS C YGGAPK QI+ ++ G+EVLI TPGRLNDL+ M VNL V +LVLDEADRMLDMGFEPQIR+II +P R Q+LFFTATWP+ VQ LA F+ PV + G + L AN I Q + V ++ +K D L+ VL+E +P K +IF SRK CD++A LW+ GY+VD+LHGD++Q RT VM F+ G+LR++VATDVAARGLDV+D+ VIN+D
Sbjct: 115 PAPMTSFASTPFAPPIRKALDAAGFPNPTPTQAQSWPIALSGRDIITVAKTGSGKTCGFLLPAFHLLLSAFEK--GRKRGAPAIVVLAPTRELACQIEEEAIKFGRTSNIRSVCAYGGAPKSLQIRKIQAGIEVLICTPGRLNDLLEMGVVNLGQVLFLVLDEADRMLDMGFEPQIRTIISKIPLER-----------------------------------QSLFFTATWPREVQTLAREFLKTPVELKFGDVNN-LNANKAILQKIIVCSDNEKSDKLKEVLKEINPDNKPEEVPKSIIFVSRKSDCDRLANTLWDAGYSVDALHGDKQQFLRTRVMDNFKAGKLRLLVATDVAARGLDVKDIQVVINYD 448
BLAST of mRNA_P-wetherbeei_contig13375.1.1 vs. uniprot
Match: B8BR52_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BR52_THAPS) HSP 1 Score: 356 bits (913), Expect = 1.120e-116 Identity = 191/366 (52.19%), Postives = 247/366 (67.49%), Query Frame = 1
Query: 1 PAPWMTWDDTPFEGPLRKALLSAGFPSPTPTQAQSWPIALNRRDLISVARTGSGKTCGFLLPAFHMLSASADALPPRMGAPPKVLVLAPTRELAMQIETEARKFGRASAIRSTCVYGGAPKYPQIKALEGGVEVLIATPGRLNDLVNMNKVNLSNVRYLVLDEADRMLDMGFEPQIRSIIEALPKARPXXXXXXXXXXXXXXXXXXXXXPPVPGPLTAATGRQTLFFTATWPKAVQRLAATFVTDPVSVTMGAADGALRANAMITQHVRVVTEGDKLDVLRNVLRET-HPKVLIFTSRKRTCDKIAERLWNWGYAVDSLHGDREQRERTEVMRRFRGGELRVIVATDVAARGLDVRDVAAVINFDM 1095
P P++ + D PF ++K L SAGF PT Q+Q+WPIA+N D+I VA+TGSGKTCGFLLP+FH S A + G P +LVLAPTRELA QI E +KFGR IRS C YGG+PKY QI ALE GVE +IATPGRLNDL+ M K NLSNV+++VLDEADRMLDMGFEPQIRSI+ ++P + T RQTL F+ATWPK +QRLA F++DP+ + +G + L AN ITQ + + +E DK+D L+ +L + H KV++F +K ++A +LW+ G+AVDSLHGDREQ ERT+V+ F+ G LR+++ATDVAARGLDV+DV V+N+DM
Sbjct: 42 PDPFIEFGDAPFSDSIQKTLKSAGFERPTFIQSQAWPIAINGSDMICVAKTGSGKTCGFLLPSFHQYFQS-KATANKGGKGPIMLVLAPTRELACQILDETQKFGRPIGIRSVCCYGGSPKYAQIAALERGVECVIATPGRLNDLIEMKKANLSNVKFVVLDEADRMLDMGFEPQIRSIMGSVPDS---------------------------------TNRQTLLFSATWPKEIQRLAFDFLSDPIQINVGEIN-VLNANKDITQKIMMCSEDDKIDRLKEILTDLKHSKVIVFVGKKYVAHELANQLWDEGFAVDSLHGDREQWERTKVINAFKQGTLRLLIATDVAARGLDVKDVGVVVNYDM 372
BLAST of mRNA_P-wetherbeei_contig13375.1.1 vs. uniprot
Match: B7S475_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7S475_PHATC) HSP 1 Score: 347 bits (891), Expect = 3.910e-112 Identity = 188/366 (51.37%), Postives = 242/366 (66.12%), Query Frame = 1
Query: 1 PAPWMTWDDTPFEGPLRKALLSAGFPSPTPTQAQSWPIALNRRDLISVARTGSGKTCGFLLPAFHMLSASADALPPRMGAPPKVLVLAPTRELAMQIETEARKFGRASAIRSTCVYGGAPKYPQIKALEGGVEVLIATPGRLNDLVNMNKVNLSNVRYLVLDEADRMLDMGFEPQIRSIIEALPKARPXXXXXXXXXXXXXXXXXXXXXPPVPGPLTAATGRQTLFFTATWPKAVQRLAATFVTDPVSVTMGAADGALRANAMITQHVRVVTEGDKLDVLRNVLRET-HPKVLIFTSRKRTCDKIAERLWNWGYAVDSLHGDREQRERTEVMRRFRGGELRVIVATDVAARGLDVRDVAAVINFDM 1095
P P+M + D PF+ +++A AGF PT Q Q+WPIAL +D+I VA+TGSGKTCGFLLP FH + + P +LVLAPTREL++QI EA+KFGR IRS C YGGA K+PQI AL+ GVE +IATPGRLNDL+ M K +LS V+YLVLDEADRMLDMGFEPQIRSII +P RQTL F+ATWPK +Q LA F+ +P+ + +G + AL AN I Q + + +E +KLD L +LR+ H K+++F ++K +C+ +A RLW G+AVDSLHGDR Q ERT VM+ F+GG+LRV++ATDVAARGLDV+DV V+N+DM
Sbjct: 134 PDPFMEFKDAPFQERIQQAFAQAGFARPTSIQGQAWPIALQNKDMICVAKTGSGKTCGFLLPVFHQHLVKQTRI--QGFTKPILLVLAPTRELSVQILEEAQKFGRPLGIRSVCCYGGASKHPQIAALQRGVECVIATPGRLNDLIEMRKADLSKVQYLVLDEADRMLDMGFEPQIRSIILNIPPEN----------------------------------RQTLLFSATWPKEIQALAHDFLKNPIQINVGEVN-ALVANKDIQQTIVMCSESEKLDKLEQILRDLMHGKIIVFVAKKISCNDLANRLWEDGFAVDSLHGDRPQWERTRVMQAFKGGQLRVLIATDVAARGLDVKDVGVVVNYDM 462
BLAST of mRNA_P-wetherbeei_contig13375.1.1 vs. uniprot
Match: A0A7S0BVZ7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BVZ7_9STRA) HSP 1 Score: 347 bits (890), Expect = 2.120e-111 Identity = 190/401 (47.38%), Postives = 243/401 (60.60%), Query Frame = 1
Query: 1 PAPWMTWDDTPFEGPLRKALLSAGFPSPTPTQAQSWPIALNRRDLISVARTGSGKTCGFLLPAFHMLSASADALPPRM--------------------------GAPPKVLVLAPTRELAMQIETEARKFGRASAIRSTCVYGGAPKYPQIKALEGGVEVLIATPGRLNDLVNMNKVNLSNVRYLVLDEADRMLDMGFEPQIRSIIEALPKARPXXXXXXXXXXXXXXXXXXXXXPPVPGPLTAATGRQTLFFTATWPKAVQRLAATFVTDPVSVTMGAADGALRANAMITQHVRVVTEGDKLDVLRNVLRET----------HPKVLIFTSRKRTCDKIAERLWNWGYAVDSLHGDREQRERTEVMRRFRGGELRVIVATDVAARGLDVRDVAAVINFDM 1095
P P+ + D PF +++AL SAGF PT QAQ+WPIALN D+I VA+TGSGKTCGFLLP+ H S L P G P +LVLAPTRELA+QIE E +KFGR+ +RS C+YGGAPKYPQI+AL GV+ +IATPGR+NDL+ M + +LS ++++VLDEADRMLDMGFEPQIRS++E +P+ R QTL F+ATWPK +QRLA F+ P+ V +G + L AN I Q++ + E +K +L+E H KV+IF SRK +CD +A LW G+AVDSLHGDR Q ERT+VM F+ G LRV++ATDVA+RGLDV+DV V+NFDM
Sbjct: 144 PTPFYNFSDAPFNATIQRALTSAGFEKPTAIQAQAWPIALNGDDMICVAKTGSGKTCGFLLPSMHQYLKSGPNLTPASTGGRGSXXXXXXXXXXXXXXXXXXXXGTKPVLLVLAPTRELAVQIEEECKKFGRSVGLRSICLYGGAPKYPQIQALNRGVDFVIATPGRINDLIEMGRCDLSAIQFVVLDEADRMLDMGFEPQIRSVLEHVPEKR-----------------------------------QTLLFSATWPKEIQRLAYDFLNTPIQVNVGDVNS-LNANKDIKQNIHICMESEKFTKCTGLLKEMTSEENGGKEKHAKVIIFVSRKMSCDSLANELWEDGFAVDSLHGDRAQWERTKVMNAFKAGTLRVLIATDVASRGLDVKDVGVVVNFDM 508
BLAST of mRNA_P-wetherbeei_contig13375.1.1 vs. uniprot
Match: A0A7S4A8S3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A8S3_9STRA) HSP 1 Score: 342 bits (878), Expect = 6.860e-110 Identity = 186/385 (48.31%), Postives = 242/385 (62.86%), Query Frame = 1
Query: 7 PWMTWDDTPFEGPLRKALLSAGFPSPTPTQAQSWPIALNRRDLISVARTGSGKTCGFLLPAFHMLSASADALPPRMG--APPKVLVLAPTRELAMQIETEARKFGRASAIRSTCVYGGAPKYPQIKALEGGVEVLIATPGRLNDLVNMNKVNLSNVRYLVLDEADRMLDMGFEPQIRSIIEALPKARPXXXXXXXXXXXXXXXXXXXXXPPVPGPLTAATGRQTLFFTATWPKAVQRLAATFVTDPVSVTMGAADGALRANAMITQHVRVVTEGDKLDVLRNVLRE--------------------THPKVLIFTSRKRTCDKIAERLWNWGYAVDSLHGDREQRERTEVMRRFRGGELRVIVATDVAARGLDVRDVAAVINFDM 1095
P++ + D PF ++K L +AGF PT QAQ+WP+A+ +DLIS+A+TGSGKTCGFLLP FH + R G A P +LVLAPTREL +QI E+RKFG +RS C YGG+ KYPQI+AL+ GVE +IA PGRLNDL+ M K +LS ++YLVLDEADRMLDMGFEPQIRSI+E T A RQTL F+ATWPK +QRLA F+ DPV + +G + AL AN I Q + ++ E DK+ L ++L+E H KV++F +RK +C+ +A +LW G+AVD LHGDR Q ER++VM F+ G LR+++ATDVAARGLDV+DV V+N+DM
Sbjct: 137 PYIDFSDAPFSDRIQKTLAAAGFARPTAIQAQAWPLAVEGKDLISIAKTGSGKTCGFLLPVFHDYEKTRSG---RSGGYAKPSLLVLAPTRELCVQISEESRKFGNPLGVRSVCCYGGSSKYPQIQALQRGVECIIACPGRLNDLIEMRKCDLSGIKYLVLDEADRMLDMGFEPQIRSIVEK----------------------------------TNAATRQTLLFSATWPKEIQRLAHDFLKDPVQINVGEVN-ALVANKDIKQTIHMINEDDKIAKLESILKELTANASGDDDKKTGVANGGKAHDKVIVFVARKFSCNDLANKLWEDGFAVDCLHGDRPQWERSKVMNAFKAGALRMLIATDVAARGLDVKDVGVVVNYDM 483
BLAST of mRNA_P-wetherbeei_contig13375.1.1 vs. uniprot
Match: A0A1V9ZNA6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZNA6_9STRA) HSP 1 Score: 338 bits (867), Expect = 1.120e-109 Identity = 183/379 (48.28%), Postives = 243/379 (64.12%), Query Frame = 1
Query: 1 PAPWMTWDDTPFEGPLRKALLSAGFPSPTPTQAQSWPIALNRRDLISVARTGSGKTCGFLLPAFHMLSASADALPPRMGAPPKVLVLAPTRELAMQIETEARKFGRASA-IRSTCVYGGAPKYPQIKALEGGVEVLIATPGRLNDLVNMNKVNLSNVRYLVLDEADRMLDMGFEPQIRSIIEALPKARPXXXXXXXXXXXXXXXXXXXXXPPVPGPLTAATGRQTLFFTATWPKAVQRLAATFVTDPVSVTMGAADGALRANAMITQHVRVVTEGDKLDVLRNVLRE-------------THPKVLIFTSRKRTCDKIAERLWNWGYAVDSLHGDREQRERTEVMRRFRGGELRVIVATDVAARGLDVRDVAAVINFDM 1095
P P +++ DTPF ++ +L AG+ +PTPTQAQSWPIAL ++D+ISVA+TGSGKT GFLLP+FH +S + G P++LVLAPTRELA QIE EA+KF RA +R+TCV+GGAPKY QI+ +E G++ L+A PGRL+DL+ M KV+L + LVLDEADRMLDMGFEPQIR+I+E +P R QTL F+ATWPKA+Q+LA F+ +PV V MG D L+AN I Q V ++ E +K D L ++ + H K ++F KR+CD++A+ W GYAV LHGD +Q +RT M +F+ G L+++ ATDVAARGLDV+DV VIN+DM
Sbjct: 56 PDPILSFKDTPFSTDIQTSLTKAGYTAPTPTQAQSWPIALTKQDMISVAKTGSGKTVGFLLPSFHHISKG------KAGHHPRILVLAPTRELATQIEAEAKKFSRAKPYVRTTCVFGGAPKYNQIRQIEQGIDCLVACPGRLSDLITMKKVSLEAIEILVLDEADRMLDMGFEPQIRAIVENIPDQR-----------------------------------QTLLFSATWPKAIQKLARAFLKNPVQVNMGNID-VLQANTDIVQSVDIIREDEKNDKLIELMNKIVKMEDPNNTDLTNHIKTIVFFRTKRSCDRLAQEYWQHGYAVGCLHGDMDQHQRTLTMNQFKQGTLKILFATDVAARGLDVKDVGIVINYDM 392
BLAST of mRNA_P-wetherbeei_contig13375.1.1 vs. uniprot
Match: A0A7S2PL85_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PL85_9STRA) HSP 1 Score: 337 bits (863), Expect = 3.420e-109 Identity = 186/396 (46.97%), Postives = 251/396 (63.38%), Query Frame = 1
Query: 7 PWMTWDDTPFEGPLRKALLSAGFPSPTPTQAQSWPIALNRRDLISVARTGSGKTCGFLLPAFHMLSASADALPPRMGAP---PKVLVLAPTRELAMQIETEARKFGRASAIRSTCVYGGAPKYPQIKALEGGVEVLIATPGRLNDLVNMNKVNLSNVRYLVLDEADRMLDMGFEPQIRSIIEALPKARPXXXXXXXXXXXXXXXXXXXXXPPVPGPLTAATGRQTLFFTATWPKAVQRLAATFVTDPVSVTMGAADGALRANAMITQHVRVVTEGDKLDVLRNVLRET------------------------------HPKVLIFTSRKRTCDKIAERLWNWGYAVDSLHGDREQRERTEVMRRFRGGELRVIVATDVAARGLDVRDVAAVINFDM 1095
P++ +DD PF ++K L +AGF PT Q+Q+WPIAL DLIS+A+TGSGKTCGFLLPAFH + A P G P ++VLAPTRELA+QI E +KFGR IRS C YGG+PKYPQI+AL+ GVE +IATPGR+NDL+ M K +LS V+++VLDEADRMLDMGFEPQIRSI+ +P+A T RQTL F+ATWPK +Q+LA F+ +PV + +G + AL AN ITQ++ ++++ +KLD L+ +L + H K+++F ++K ++A +LW+ G+A DSLHGDR Q ERT+V+ F+ G LR+++ATDVAARGLDV+DV AV+N+DM
Sbjct: 33 PFIEFDDAPFNPVIQKTLKAAGFERPTLIQSQAWPIALQGTDLISIAKTGSGKTCGFLLPAFHNFLQTKGA--PGNGRNFQGPMMIVLAPTRELAIQILDETQKFGRPIGIRSVCCYGGSPKYPQIQALQRGVECIIATPGRINDLIEMRKADLSGVKFVVLDEADRMLDMGFEPQIRSILSNVPEA---------------------------------TKRQTLLFSATWPKEIQKLAFDFLNEPVQINVGEVN-ALNANKDITQNIIMLSDDEKLDKLKEILTQLVDSADESEEKSAPAPTGRFAPKPVDLGGKKHAKIIVFVAKKYVAHELANQLWDDGFACDSLHGDRAQWERTKVIGAFKEGTLRMLIATDVAARGLDVKDVGAVVNYDM 392 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13375.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13375.1.1 >prot_P-wetherbeei_contig13375.1.1 ID=prot_P-wetherbeei_contig13375.1.1|Name=mRNA_P-wetherbeei_contig13375.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=365bp MTWDDTPFEGPLRKALLSAGFPSPTPTQAQSWPIALNRRDLISVARTGSGback to top mRNA from alignment at P-wetherbeei_contig13375:219..1776+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13375.1.1 ID=mRNA_P-wetherbeei_contig13375.1.1|Name=mRNA_P-wetherbeei_contig13375.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1558bp|location=Sequence derived from alignment at P-wetherbeei_contig13375:219..1776+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13375:219..1776+ >mRNA_P-wetherbeei_contig13375.1.1 ID=mRNA_P-wetherbeei_contig13375.1.1|Name=mRNA_P-wetherbeei_contig13375.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1095bp|location=Sequence derived from alignment at P-wetherbeei_contig13375:219..1776+ (Phaeothamnion wetherbeei SAG_119_79)back to top |