mRNA_P-wetherbeei_contig1337.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1337.3.1
Unique NamemRNA_P-wetherbeei_contig1337.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1337.3.1 vs. uniprot
Match: D8LHY4_ECTSI (Geranyl-diphosphate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHY4_ECTSI)

HSP 1 Score: 435 bits (1118), Expect = 1.900e-147
Identity = 233/339 (68.73%), Postives = 266/339 (78.47%), Query Frame = 1
Query:   52 LGAGPDPFHLVKGDINTLSDGIKALLGTDHPVLSAAAKYFFEIDGGKKVRPTMVPGGPAATXXXXXXXXXXXXAPAELGAFDIACQRRLAEITEMIHTASLFHDDVIDKADTRRGVPTVNKVFGNKLAILAGDFLLARASVSLARLRSVEVVELLSTVIEHLVKGEVLQMRPVMNGTPAFEYYVRKNYYKTGSLMANSCKAAAILGRH---AQDIAHEYGKRVGLAFQLVDDVLDFEGNDFTLGKPALNDLRQGLATAPVLLATERSPHLQQLINRKFNMPGDVDAVLQLVHESGSIQRTKDIARVQAELATDAVMRLSPSPERDALVNLAYKIVHRNH 1059
            L  GPDPF LV  ++  LSDGIK+L+GT+H VL+AAAKYFFE+DGGKK+RPTMV     A                EL       Q RLAEITEMIH ASLFHDDVID+ADTRRGVP+VNKVFGNKLAILAGDFLLAR+S+SLARLRS+E VEL+S  IEHLVKGEVLQMRP  +G  AFEYYVRKNYYKTGSLMANSCKA+A+LG+H    Q++A EYGKRVGLAFQLVDD+LDFEGN FTLGKPALNDLRQGLATAPVLLA E+ P L +LI+RKF  PGDVD  L+LVH S  I R K++A VQAE A  A++ L  SP ++ALV LA+KIV+RNH
Sbjct:  178 LADGPDPFELVSAELAGLSDGIKSLIGTEHAVLNAAAKYFFELDGGKKIRPTMVILMSQACNSNSQQVRPDVQPGTELVN---PLQLRLAEITEMIHAASLFHDDVIDEADTRRGVPSVNKVFGNKLAILAGDFLLARSSMSLARLRSLESVELMSAAIEHLVKGEVLQMRPTEDGGGAFEYYVRKNYYKTGSLMANSCKASAVLGQHDLEVQEVAFEYGKRVGLAFQLVDDILDFEGNTFTLGKPALNDLRQGLATAPVLLAAEQQPGLAKLISRKFRGPGDVDEALELVHRSDGIARAKEVAVVQAEKAMSAILTLHDSPAQNALVQLAHKIVNRNH 513          
BLAST of mRNA_P-wetherbeei_contig1337.3.1 vs. uniprot
Match: A0A836CLR5_9STRA (Geranyl-diphosphate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLR5_9STRA)

HSP 1 Score: 418 bits (1074), Expect = 8.740e-142
Identity = 229/335 (68.36%), Postives = 255/335 (76.12%), Query Frame = 1
Query:   64 PDPFHLVKGDINTLSDGIKALLGTDHPVLSAAAKYFFEIDGGKKVRPTMVPGGPAATXXXXXXXXXXXXAPAELGAFDIACQRRLAEITEMIHTASLFHDDVIDKADTRRGVPTVNKVFGNKLAILAGDFLLARASVSLARLRSVEVVELLSTVIEHLVKGEVLQMRPVMNG--TPAFEYYVRKNYYKTGSLMANSCKAAAILGRH---AQDIAHEYGKRVGLAFQLVDDVLDFEGNDFTLGKPALNDLRQGLATAPVLLATERSPHLQQLINRKFNMPGDVDAVLQLVHESGSIQRTKDIARVQAELATDAVMRLSPSPERDALVNLAYKIVHR 1053
            PDPF LV  D+ TLSDG K LLGTDHPVL +AA+YFF++DGGKKVRP MV                   AP     F +ACQRRLAEITEMIHTASLFHDDVIDKADTRRG P+ N+ FGNKLAILAGDFLLARASVSL+RLRSVE VELLSTVIEHLVKGEVLQMRP ++G  T AFEYYV K YYKTGSLMANSC+AAA+LG      Q  AHEYGKRVGLAFQL+DDVLDFEG+D +LGKPALNDL++GLATAPVLLA E  P L  ++ RKF   GD  A  +LV  S  I R +D+A VQAELA DA  RL+PS ERDALV LA ++V R
Sbjct:  116 PDPFRLVASDMKTLSDGCKELLGTDHPVLQSAAQYFFDVDGGKKVRPVMV--------LLMSRACNASCAPPP-APFALACQRRLAEITEMIHTASLFHDDVIDKADTRRGAPSANRAFGNKLAILAGDFLLARASVSLSRLRSVETVELLSTVIEHLVKGEVLQMRPHVDGAGTRAFEYYVHKTYYKTGSLMANSCQAAALLGGSPAAVQRDAHEYGKRVGLAFQLIDDVLDFEGSDASLGKPALNDLKEGLATAPVLLAAEEHPALLDMVARKFGRDGDAAAAHELVLRSDGIARARDLAIVQAELAMDAATRLAPSEERDALVALAARVVDR 441          
BLAST of mRNA_P-wetherbeei_contig1337.3.1 vs. uniprot
Match: A0A7S2B533_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B533_9STRA)

HSP 1 Score: 398 bits (1023), Expect = 3.350e-134
Identity = 221/348 (63.51%), Postives = 252/348 (72.41%), Query Frame = 1
Query:   64 PDPFHLVKGDINTLSDGIKALLGTDHPVLSAAAKYFFEIDGGKKVRPTMVPGGPAATXXXXXXXXXXXXAPAELGAFDIA-----CQRRLAEITEMIHTASLFHDDVIDKADTRRGVPTVNKVFGNKLAILAGDFLLARASVSLARLRSVEVVELLSTVIEHLVKGEVLQMRPV-MNGTPAFEYYVRKNYYKTGSLMANSCKAAAILGRH---------AQ-DIAHEYGKRVGLAFQLVDDVLDFEGNDFTLGKPALNDLRQGLATAPVLLATERSPHLQQLINRKFNMPGDVDAVLQLVHESGSIQRTKDIARVQAELATDAVMRLSPSPERDALVNLAYKIVHRNH 1059
            PDPF LV G+I++LSDGI++LLG+DHPVL   A+YFFE+DGGKK+RPTMV                     A   A D+       QRRLAEITEMIHTASLFHDDVIDKADTRRGVP+VN+ FGNKLAIL GDFLLARAS+SLARLR+VEVVELLSTVIEHLVKGEV+QMR   +    A EYY  KNYYKTGSLMANSCKAAAIL  H         AQ + A  YGK VGLAFQL+DDVLD EG+  +LGKPAL DL  GLATAPVLLA E  P LQ LI RKF  PGDVD  L+LV  S  + R KD+A  QA++A +A++ + PS  RDAL +LAYK+V RNH
Sbjct:   99 PDPFDLVAGEIDSLSDGIRSLLGSDHPVLEVCARYFFELDGGKKIRPTMV-------------LLMSHAVAASASAGDVTPGVLPSQRRLAEITEMIHTASLFHDDVIDKADTRRGVPSVNRAFGNKLAILGGDFLLARASMSLARLRNVEVVELLSTVIEHLVKGEVMQMRGGHLKDVTALEYYFHKNYYKTGSLMANSCKAAAILSAHDNTDPAVIAAQAEAAFSYGKHVGLAFQLIDDVLDMEGSVQSLGKPALADLGAGLATAPVLLAAEEFPRLQVLIERKFKEPGDVDETLRLVERSQGMTRAKDLATAQADMALEAILIMEPSSARDALAHLAYKVVTRNH 433          
BLAST of mRNA_P-wetherbeei_contig1337.3.1 vs. uniprot
Match: A0A7S2SRE0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRE0_9STRA)

HSP 1 Score: 388 bits (996), Expect = 5.920e-131
Identity = 220/362 (60.77%), Postives = 261/362 (72.10%), Query Frame = 1
Query:    1 IDPSRLPSVELGTSG--RGLGAG---PDPFHLVKGDINTLSDGIKALLGTDHPVLSAAAKYFFEI-DGGKKVRPTMVPGGPAATXXXXXXXXXXXXAPAELGAFDIACQRRLAEITEMIHTASLFHDDVIDKADTRRGVPTVNKVFGNKLAILAGDFLLARASVSLARLRSVEVVELLSTVIEHLVKGEVLQMRPV-MNGTPAFEYYVRKNYYKTGSLMANSCKAAAILGRHA---QDIAHEYGKRVGLAFQLVDDVLDFEGNDFTLGKPALNDLRQGLATAPVLLATERSPHLQQLINRKFNMPGDVDAVLQLVHESGSIQRTKDIARVQAELATDAVMRLSPSPERDALVNLAYKIVHRN 1056
            +D  R PS   G +   R   AG   PDPF LV+ +I TLS GI+ LLG+DHPVL   A++FF+  DGGKK+RPTMV                    P+      +A QRRLAEITEMIHTASLFHDDVIDKADTRRGV +VNK +GNKLAILAGDFLLARASV+LARLR+VEVVEL+S++IEHLVKGEV+QMR   +    A EYY  KNYYKTGSLMANSCKAA +LG  +   QDIA  YGK +GLAFQLVDDVLDFEG   +LGKPAL DLR GL TAPVLLA E+ P LQ LI+RKF+ PGDV+  L  V  S  ++RTKD+A  QA+LA D++M+L PS  R+AL +LA+K+V R+
Sbjct:   24 VDLERPPSTTSGVAAFVREREAGKVPPDPFALVQDEITTLSSGIRQLLGSDHPVLELCARHFFDWGDGGKKIRPTMV-----------LLLALATNPPSHEHEGLLASQRRLAEITEMIHTASLFHDDVIDKADTRRGVESVNKAYGNKLAILAGDFLLARASVALARLRNVEVVELISSIIEHLVKGEVMQMRGGHLQDVSALEYYFHKNYYKTGSLMANSCKAAVVLGGGSAVDQDIAFAYGKHIGLAFQLVDDVLDFEGTVESLGKPALADLRAGLVTAPVLLAVEKHPELQSLIDRKFSEPGDVEKALACVEASDGLERTKDLAVAQADLAMDSIMQLPPSEAREALAHLAFKVVARS 374          
BLAST of mRNA_P-wetherbeei_contig1337.3.1 vs. uniprot
Match: A0A7S1U4D1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4D1_9STRA)

HSP 1 Score: 372 bits (955), Expect = 7.750e-124
Identity = 212/349 (60.74%), Postives = 245/349 (70.20%), Query Frame = 1
Query:   67 DPFHLVKGDINTLSDGIKALLGTDHPVLSAAAKYFFEIDGGKKVRPTMVPGGPAATXXXXXXXXXXXXAPAELGAFDIACQRRLAEITEMIHTASLFHDDVIDKADTRRGVPTVNKVFGNKLAILAGDFLLARASVSLARLRSVEVVELLSTVIEHLVKGEVLQMRP---VMNGT--------------PAFEYYVRKNYYKTGSLMANSCKAAAILGRH---AQDIAHEYGKRVGLAFQLVDDVLDFEGNDFTLGKPALNDLRQGLATAPVLLATERSPHLQQLINRKFNMPGDVDAVLQLVHESGSIQRTKDIARVQAELATDAVMRLSPSPERDALVNLAYKIVHR 1053
            DPF LV G I +L DGIK LLG+DHPVL A A+YFFE+DGGKK+RPTMV                     A  G  D   QRRLAEITEMIHTASLFHDDVIDKADTRRG P+VN+VFGNK+AILAGDFLLARAS+SLARLR++E VELLSTVIEHLVKGEV+QMRP   + NG                  E+Y+RKNYYKT SLMANSC+A A+LG +   AQ  A++YGK VGLAFQLVDD+LDFEG+  TLGKPAL DL QG ATAPVLLA E  P L+QLI RKF   GDV    +LV +S  ++R KD+A  QAE+A +A   L  +  RDAL+ LA  +V R
Sbjct:  106 DPFALVSGHITSLGDGIKHLLGSDHPVLQACAQYFFELDGGKKIRPTMV-----------------LLVAAACGGIDDR-QRRLAEITEMIHTASLFHDDVIDKADTRRGEPSVNRVFGNKMAILAGDFLLARASISLARLRNLEAVELLSTVIEHLVKGEVMQMRPPPSLGNGDGRGASDGPEWSVSLSPLEFYMRKNYYKTASLMANSCRACALLGGNDEVAQRAAYDYGKHVGLAFQLVDDILDFEGSAETLGKPALADLAQGHATAPVLLAAEEHPELEQLILRKFEEVGDVARAERLVRDSDGLRRAKDLAVAQAEVAIEAAQLLPQTQHRDALMRLACMVVDR 436          
BLAST of mRNA_P-wetherbeei_contig1337.3.1 vs. uniprot
Match: A0A7S2RZQ9_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RZQ9_9STRA)

HSP 1 Score: 363 bits (933), Expect = 1.810e-120
Identity = 199/337 (59.05%), Postives = 247/337 (73.29%), Query Frame = 1
Query:   67 DPFHLVKGDINTLSDGIKALLGTDHPVLSAAAKYFFEIDGGKKVRPTMVPGGPAATXXXXXXXXXXXXAPA-----ELGAFDIACQRRLAEITEMIHTASLFHDDVIDKADTRRGVPTVNKVFGNKLAILAGDFLLARASVSLARLRSVEVVELLSTVIEHLVKGEVLQMRPVMNGTPAFEYYVRKNYYKTGSLMANSCKAAAILGRHAQD---IAHEYGKRVGLAFQLVDDVLDFEGNDFTLGKPALNDLRQGLATAPVLLATERSPHLQQLINRKFNMPGDVDAVLQLVHESGSIQRTKDIARVQAELATDAVMRLSPSPERDALVNLAYKIVHR 1053
            DPF+LV+ ++  LS+ IK LLG+DHPVLS  A+YFFE DGGKK+RPT+V                   +PA     E+ +   A Q RL EITEMIHTASL HDDVID ADTRRGV +VN++FGNKLAILAGDFLLARAS+ LARLR+VEVVE++ST IEHLVKGEV+QM+  + G  AFEYY+RKNYYKTGSL+ANS  A  +LG H+++   IA EYG+ +G AFQL+DD LDFEG+  +LGKPAL DL+QGLATAP+L A +  P L+ +I RKF+   DVD     V  SGSI +T+++A   AE A  AV++L PSPERDALV+LA K+V+R
Sbjct:  111 DPFNLVQDEVVGLSENIKQLLGSDHPVLSTVARYFFEQDGGKKMRPTLV--------LLMSRAANAHESPAQENDKEMNSAVYASQIRLGEITEMIHTASLLHDDVIDVADTRRGVKSVNQMFGNKLAILAGDFLLARASICLARLRNVEVVEIMSTSIEHLVKGEVMQMKSDIKGPDAFEYYLRKNYYKTGSLIANSILAGTVLGGHSEEVQTIAFEYGEAIGHAFQLIDDALDFEGSIQSLGKPALADLKQGLATAPILFAQDDFPELRPMIERKFSHSEDVDRAATCVLSSGSIAQTRNMAMSYAEKAIRAVLKLKPSPERDALVHLALKVVNR 439          
BLAST of mRNA_P-wetherbeei_contig1337.3.1 vs. uniprot
Match: A0A2D4C6A7_PYTIN (Solanesyl diphosphate synthase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6A7_PYTIN)

HSP 1 Score: 359 bits (921), Expect = 1.220e-118
Identity = 200/336 (59.52%), Postives = 244/336 (72.62%), Query Frame = 1
Query:   64 PDPFHLVKGDINTLSDGIKALLGTDHPVLSAAAKYFFEIDGGKKVRPTMVP-GGPAATXXXXXXXXXXXXAPAELGAFDIACQRRLAEITEMIHTASLFHDDVIDKADTRRGVPTVNKVFGNKLAILAGDFLLARASVSLARLRSVEVVELLSTVIEHLVKGEVLQMRPV-MNGTPAFEYYVRKNYYKTGSLMANSCKAAAILGRHAQ---DIAHEYGKRVGLAFQLVDDVLDFEGNDFTLGKPALNDLRQGLATAPVLLATERSPHLQQLINRKFNMPGDVDAVLQLVHESGSIQRTKDIARVQAELATDAVMRLSPSPERDALVNLAYKIVHRN 1056
            PDPF LV  D+ +++  IK +LG+DHPVLSA A+YFFE DGGKKVRPTMV     AA               +E   F +A Q+RLAEITEMIHTASL HDDVID+ADTRRGVP+VNKVFG KL+ILAG FLLAR+S+ LARLRS+E +EL+ST IEHLVKGEV+QM+         FEYY+RKNYYKTGSLMANSC+AA  LG+H +   D+   YG+ +GLAFQLVDDVLD+EG     GKP L DL+ GLATAP+LLA +  P L++L  RKF+  GD++   +LV +S  I R+K +A  QAELA  AVM+L+PSP RDALV LA  +V R+
Sbjct:  110 PDPFSLVAEDMVSITSSIKHILGSDHPVLSAVARYFFEHDGGKKVRPTMVLLVSXAAEAHRRALGLPVPTTQSE--DFTVAAQQRLAEITEMIHTASLLHDDVIDEADTRRGVPSVNKVFGXKLSILAGXFLLARSSICLARLRSLEAIELMSTAIEHLVKGEVMQMKHADSQSISPFEYYLRKNYYKTGSLMANSCRAALELGKHDEIVCDLGFAYGRHIGLAFQLVDDVLDYEGTQS--GKPLLADLKSGLATAPLLLAQQEFPVLKELAARKFSKAGDIELASELVEKSTGIARSKALAIGQAELACQAVMQLAPSPARDALVRLAQLVVDRS 441          
BLAST of mRNA_P-wetherbeei_contig1337.3.1 vs. uniprot
Match: A0A482S1F7_9ARCH (Solanesyl diphosphate synthase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1F7_9ARCH)

HSP 1 Score: 354 bits (909), Expect = 1.420e-118
Identity = 194/330 (58.79%), Postives = 237/330 (71.82%), Query Frame = 1
Query:   79 LVKGDINTLSDGIKALLGTDHPVLSAAAKYFFEIDGGKKVRPTMVPGGPAATXXXXXXXXXXXXAPAELGAFDIACQRRLAEITEMIHTASLFHDDVIDKADTRRGVPTVNKVFGNKLAILAGDFLLARASVSLARLRSVEVVELLSTVIEHLVKGEVLQMRPVMNGTPAFEYYVRKNYYKTGSLMANSCKAAAILGRHAQD---IAHEYGKRVGLAFQLVDDVLDFEGNDFTLGKPALNDLRQGLATAPVLLATERSPHLQQLINRKFNMPGDVDAVLQLVHESGSIQRTKDIARVQAELATDAVMRLSPSPERDALVNLAYKIVHRNH 1059
            +V+ DI++LS GIK LLG+DHPVL + A+YFFEIDGGKK+RPTMV                   +PA L A  +  QRRLAEITEMIHTASLFHDDVIDKA  RR + +VN+VFGNKLAIL GDFLL+RASVSLARLR++EVVELLS VIEHLVKGE++QM+    G  A EYY+RKN+YKT SLM +SC AAA+LG H ++    ++ YG  +G AFQL+DD LDFEG+  +LGK  L DL+ GLATAP L A +  P L QLI RKF  PGDVD  L LV  S  +Q+ KD+A+V AE A +A+  L PS  RD+L+ LA K+V R +
Sbjct:    1 MVEKDISSLSGGIKELLGSDHPVLESCARYFFEIDGGKKIRPTMV--------LAMSYALNAGGSPASLCA--MPSQRRLAEITEMIHTASLFHDDVIDKATMRRSMSSVNQVFGNKLAILGGDFLLSRASVSLARLRNLEVVELLSVVIEHLVKGEIMQMKSSNTGRSAMEYYLRKNFYKTASLMGHSCLAAAVLGGHNEEQKRASYLYGTYIGQAFQLIDDALDFEGSTNSLGKAPLADLKSGLATAPTLFAVDEHPKLLQLIGRKFESPGDVDEALSLVQNSQGLQKCKDLAQVHAERAIEAIGCLPPSAARDSLIALACKVVVRTY 320          
BLAST of mRNA_P-wetherbeei_contig1337.3.1 vs. uniprot
Match: A0A8K1CPQ7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPQ7_PYTOL)

HSP 1 Score: 357 bits (917), Expect = 2.500e-118
Identity = 195/334 (58.38%), Postives = 245/334 (73.35%), Query Frame = 1
Query:   67 DPFHLVKGDINTLSDGIKALLGTDHPVLSAAAKYFFEIDGGKKVRPTMVPGGPAATXXXXXXXXXXXXAPAELGAFDIACQRRLAEITEMIHTASLFHDDVIDKADTRRGVPTVNKVFGNKLAILAGDFLLARASVSLARLRSVEVVELLSTVIEHLVKGEVLQMRPV--MNGTPAFEYYVRKNYYKTGSLMANSCKAAAILGRHAQ---DIAHEYGKRVGLAFQLVDDVLDFEGNDFTLGKPALNDLRQGLATAPVLLATERSPHLQQLINRKFNMPGDVDAVLQLVHESGSIQRTKDIARVQAELATDAVMRLSPSPERDALVNLAYKIVHR 1053
            DPF LV+ ++ ++++ IK +LG+DHPVLSA A+YFFE DGGKKVRPTMV     A             +  +   F +A Q+RLAEITEMIHTASL HDDVID+ADTRRGVP+VNKVFG+KL+ILAGDFLLAR+S+ LARLRS+E +EL+ST IEHLVKGEV+QM+     +    FEYY+RKNYYKTGSLMANSC+AA  LG+H +   D+   YG+ +GLAFQL+DDVLD+EG     GKP L DL+ GL+TAP+LLA E  P L++L  RKF+  GD++    LV +S  I R+K +A  QAELA  AVM+ +PSP RDALV+LA  +V R
Sbjct:   89 DPFQLVQHEMVSVTESIKRILGSDHPVLSAVARYFFEHDGGKKVRPTMVLLVSMAAEAHRRAVGLPLPS-TQSEEFTVAAQQRLAEITEMIHTASLLHDDVIDEADTRRGVPSVNKVFGDKLSILAGDFLLARSSICLARLRSLEAIELMSTAIEHLVKGEVMQMKNADGRSDITPFEYYLRKNYYKTGSLMANSCRAALALGKHDEFVCDMGFAYGRHIGLAFQLIDDVLDYEGTQS--GKPLLADLKSGLSTAPLLLAQEEFPVLRELAARKFSKDGDIELASDLVDKSTGIARSKALAIGQAELACQAVMQFAPSPARDALVHLAQLVVDR 419          
BLAST of mRNA_P-wetherbeei_contig1337.3.1 vs. uniprot
Match: A0A0P1AGZ3_PLAHL (Geranylgeranyl diphosphate synthase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AGZ3_PLAHL)

HSP 1 Score: 356 bits (914), Expect = 7.340e-118
Identity = 194/338 (57.40%), Postives = 242/338 (71.60%), Query Frame = 1
Query:   67 DPFHLVKGDINTLSDGIKALLGTDHPVLSAAAKYFFEIDGGKKVRPTMVPGGPAATXXXXXXXXXXXXAPA---ELGAFDIACQRRLAEITEMIHTASLFHDDVIDKADTRRGVPTVNKVFGNKLAILAGDFLLARASVSLARLRSVEVVELLSTVIEHLVKGEVLQMR--PVMNGTPAFEYYVRKNYYKTGSLMANSCKAAAILGRHAQ---DIAHEYGKRVGLAFQLVDDVLDFEGNDFTLGKPALNDLRQGLATAPVLLATERSPHLQQLINRKFNMPGDVDAVLQLVHESGSIQRTKDIARVQAELATDAVMRLSPSPERDALVNLAYKIVHRN 1056
            DPF LV  DI  ++D IK +LG+DHPVL+A A+YFFE DGGKKVRPTMV                    P    +   + +A Q+RLAEITEMIHTASL HDDVID A+TRRG P+VNKVFG K+A+LAGDFLLAR+SVSLARLR+++ VEL+ST IEHLVKGEV+QM+     +    FEYY+RKNYYKTGSLM+NSCKAA +LG+H +   D+   YG+ +GLAFQL+DDVLD+EG     GKP L DL+ GL+TAP+LLA E  P L++L  RKF   GDV    +LV +S  I R++ +A  QAELA  A M+ +PSPERDA+V LA K+V+R+
Sbjct:   90 DPFQLVAQDIVNVNDSIKRILGSDHPVLAAVARYFFEHDGGKKVRPTMV----LLVSRAAEAHRRITSTPLPEMQSKEYTLAAQQRLAEITEMIHTASLMHDDVIDDAETRRGQPSVNKVFGGKMAVLAGDFLLARSSVSLARLRNLQAVELMSTSIEHLVKGEVMQMKNADTRDDITPFEYYLRKNYYKTGSLMSNSCKAALVLGKHDEHICDLGFAYGRHIGLAFQLIDDVLDYEG--VNTGKPLLADLKSGLSTAPLLLAQEEFPVLRELAKRKFAWEGDVKLASELVEKSTGIARSRAMAIGQAELAAQAAMQFAPSPERDAMVRLAQKVVYRS 421          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1337.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHY4_ECTSI1.900e-14768.73Geranyl-diphosphate synthase n=2 Tax=Ectocarpus Ta... [more]
A0A836CLR5_9STRA8.740e-14268.36Geranyl-diphosphate synthase n=1 Tax=Tribonema min... [more]
A0A7S2B533_9STRA3.350e-13463.51Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2SRE0_9STRA5.920e-13160.77Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1U4D1_9STRA7.750e-12460.74Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2RZQ9_9STRA1.810e-12059.05Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A2D4C6A7_PYTIN1.220e-11859.52Solanesyl diphosphate synthase n=1 Tax=Pythium ins... [more]
A0A482S1F7_9ARCH1.420e-11858.79Solanesyl diphosphate synthase n=1 Tax=archaeon Ta... [more]
A0A8K1CPQ7_PYTOL2.500e-11858.38Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0P1AGZ3_PLAHL7.340e-11857.40Geranylgeranyl diphosphate synthase n=1 Tax=Plasmo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1337contigP-wetherbeei_contig1337:3527..5808 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LHY4
Preferred nameGPPS
PFAMspolyprenyl_synt
Model size1062
Max annot lvl2759|Eukaryota
KEGG rclassRC00279
KEGG koko:K05355,ko:K14066
KEGG ReactionR01658,R09245,R09246
KEGG Pathwayko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130
KEGG ModuleM00366
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009507,GO:0009536,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0016740,GO:0016765,GO:0022414,GO:0032501,GO:0032502,GO:0042180,GO:0042181,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0050347,GO:0051186,GO:0051188,GO:0061458,GO:0071704,GO:1901576,GO:1901661,GO:1901663
Exons5
Evalue3.12e-148
EggNOG OGsCOG0142@1|root,KOG0776@2759|Eukaryota
Ec32 ortholog descriptiongeranyl-diphosphate synthase
Ec32 orthologEc-18_000990.1
EC2.5.1.1,2.5.1.82,2.5.1.83
Descriptionisoprenoid biosynthetic process
Cds size1062
COG categoryH
BRITEko00000,ko00001,ko00002,ko01000,ko01006
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185982.7779734-CDS-P-wetherbeei_contig1337:3526..37401683185982.7779734-CDS-P-wetherbeei_contig1337:3526..3740Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1337 3527..3740 +
1683185982.7897747-CDS-P-wetherbeei_contig1337:3967..43621683185982.7897747-CDS-P-wetherbeei_contig1337:3967..4362Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1337 3968..4362 +
1683185982.8005283-CDS-P-wetherbeei_contig1337:4789..48561683185982.8005283-CDS-P-wetherbeei_contig1337:4789..4856Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1337 4790..4856 +
1683185982.8142674-CDS-P-wetherbeei_contig1337:5136..53291683185982.8142674-CDS-P-wetherbeei_contig1337:5136..5329Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1337 5137..5329 +
1683185982.8308015-CDS-P-wetherbeei_contig1337:5615..58081683185982.8308015-CDS-P-wetherbeei_contig1337:5615..5808Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1337 5616..5808 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1337.3.1prot_P-wetherbeei_contig1337.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1337 3527..5808 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1337.3.1

>prot_P-wetherbeei_contig1337.3.1 ID=prot_P-wetherbeei_contig1337.3.1|Name=mRNA_P-wetherbeei_contig1337.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=354bp
IDPSRLPSVELGTSGRGLGAGPDPFHLVKGDINTLSDGIKALLGTDHPVL
SAAAKYFFEIDGGKKVRPTMVPGGPAATAAAAAAAAALAAAPAELGAFDI
ACQRRLAEITEMIHTASLFHDDVIDKADTRRGVPTVNKVFGNKLAILAGD
FLLARASVSLARLRSVEVVELLSTVIEHLVKGEVLQMRPVMNGTPAFEYY
VRKNYYKTGSLMANSCKAAAILGRHAQDIAHEYGKRVGLAFQLVDDVLDF
EGNDFTLGKPALNDLRQGLATAPVLLATERSPHLQQLINRKFNMPGDVDA
VLQLVHESGSIQRTKDIARVQAELATDAVMRLSPSPERDALVNLAYKIVH
RNH*
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mRNA from alignment at P-wetherbeei_contig1337:3527..5808+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1337.3.1 ID=mRNA_P-wetherbeei_contig1337.3.1|Name=mRNA_P-wetherbeei_contig1337.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2282bp|location=Sequence derived from alignment at P-wetherbeei_contig1337:3527..5808+ (Phaeothamnion wetherbeei SAG_119_79)
ATCGATCCCTCAAGATTGCCGTCCGTCGAGCTGGGCACGAGCGGACGAGG ATTGGGGGCAGGCCCAGACCCCTTCCACCTGGTCAAGGGAGACATCAACA CCTTATCGGACGGCATCAAGGCCTTATTAGGAACAGATCACCCCGTGCTT TCCGCCGCCGCCAAATATTTCTTCGAGATTGACGGCGGCAAGAAAGTGCG GCCAACCATGGTACGTCTCATGGGAACGAAGACTGGCGCTGATCTATCTT AGTGTGCGTCTACACCGAATCAACCATCTGCCCTACGGGATTGCCTACGA GCAGAACCGCTACACTAGACTCAATTGCAACAATACTACTCCCTTCCCCT TCCCTTTAGGTGCTCTTGATGAGCTATGCGTGCAACAGCCACGGCGAGGA ACAACGGTCTACCGCCGCCGCCGCCGCCGGCGTCGCCCGAGCGGGCGGTC CCGCCGCCACCGCCGCCGCCGCTGCCGCCGCCGCCGCCCTGGCCGCTGCC CCCGCCGAGCTGGGCGCCTTCGATATCGCCTGCCAGCGGCGCCTTGCCGA AATCACCGAGATGATCCACACGGCGTCCCTCTTCCACGACGACGTCATCG ACAAGGCCGACACGCGGCGCGGCGTGCCCACCGTGAACAAGGTGTTCGGG AACAAGCTGGCGATCCTGGCGGGGGACTTTCTGCTGGCGCGAGCGTCGGT GAGCCTGGCGCGGCTGCGGAGCGTAGAGGTAGTGGAGCTGCTGTCGACTG TCATCGAGCACCTCGTCAAGGGGGAGGTGCTACAGATGCGCCCCGTCATG AACGGCACCCCGGCCTTTGAATATTACGTCCGCAAGGTGAGCGCCGGATG GATGAGGCTAGAGCTCTAGTCAAGAGGAGAAAGGAAAACGCGTGGCATTT GCGGGCTTTTTTGAGAAGCTTTCTTGAATGTTCTGTTCTGAGGCGAAGCT TCTGCTTCGTTGCGTCACATAGGCTCTCCCGCTCTTCTACAAATGCGCCC AGTTTTCGGTCTCTTCCTTCGTTATAGGCATTCCCTTCCAGGCCAGGTGG CGGCTGTTGCGCCTTTCCTGGTCTTCTTTCTTCCACCTTCCGCATCCTCT TTTTGCGGAGCTAAACTGCTTCTTGAACGGGACATTATCAAGGGATTGTA TGCACCTGGATGCGTTAAGTTCTTCGTTTTACGCACTCTCTAAGCTAATT TATGCTGAACCTGTGCTAATTTTAAATAATTACGGCCTCCCTTTTCCTTC ATTGTGGACGCAGAACTATTACAAGACGGGAAGCCTGATGGCGAACAGCT GCAAAGCGGCGGCCATCTTAGGCCGACACGGTCTCGAGATCCAGGCGAGC CACGGGCGGAATATTCCGTGGAAAAGTGTGGGAAAGGGTTGCTGCGGCAA GTTTTTCTCTCCTCCTCAAGCGACTGATTTGAAACGCAAGGGTTTGGGGC ACCAATGTGAAGCGAGTTGCGGTTCCGGCTTAATTCCCTTTTCCTCCTAA CTCTCATTTTCTGCCTTTCTTTGCCTGCCTCTCCGCTTTTACATTCGTTC TACTTGCTTCTTTTTCCTCGATTGATTAACCTTCATAAACACCCTTAAAC CTAAACCGAGCACAGGACATCGCCCATGAGTACGGCAAGCGGGTGGGACT GGCCTTCCAGCTGGTGGACGACGTGTTGGATTTTGAGGGCAATGATTTCA CCCTCGGCAAGCCCGCGCTCAACGACCTCCGCCAGGGACTCGCCACCGCC CCCGTGCTGCTCGCCACGGAGCGTTCCCCGCACTTGCAGCAGCTCATTAA CAGGTGCGGCGCGGAGTAAGAGGGAGAGGGAAGACTGAGAAAGCGGTCGA TAAAGGCCGTGGACACCGTCTGAGCTCGGTTGGAAGAAATGGAACCGGTT CGAACTCTGGCTTCTGTCCTTGAAAGTGCAGATGCCCGCTTTGCACCGTC GTGGCGCCCCGGCTGTGTTGTTACTTTTGCTGCCGCTTCTTCGGCTCTAC ACGAGCGCCAATCACATTCTTCTTTCTTCCGTCCGCTATTCTTTGCCGGT GGCGGTGCGGTGCGGTGCGATGCGGCGCGATGTATGCAGAAAGTTCAACA TGCCGGGGGATGTGGACGCGGTGCTGCAGTTGGTGCACGAGTCGGGCAGC ATCCAGCGCACCAAGGACATCGCCCGCGTGCAGGCCGAGCTCGCCACGGA CGCCGTCATGCGCCTCTCCCCGAGCCCCGAGCGGGACGCCCTTGTCAACC TCGCCTACAAGATTGTACACCGCAATCACTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1337:3527..5808+

>mRNA_P-wetherbeei_contig1337.3.1 ID=mRNA_P-wetherbeei_contig1337.3.1|Name=mRNA_P-wetherbeei_contig1337.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1062bp|location=Sequence derived from alignment at P-wetherbeei_contig1337:3527..5808+ (Phaeothamnion wetherbeei SAG_119_79)
ATCGATCCCTCAAGATTGCCGTCCGTCGAGCTGGGCACGAGCGGACGAGG
ATTGGGGGCAGGCCCAGACCCCTTCCACCTGGTCAAGGGAGACATCAACA
CCTTATCGGACGGCATCAAGGCCTTATTAGGAACAGATCACCCCGTGCTT
TCCGCCGCCGCCAAATATTTCTTCGAGATTGACGGCGGCAAGAAAGTGCG
GCCAACCATGGTACCGGGCGGTCCCGCCGCCACCGCCGCCGCCGCTGCCG
CCGCCGCCGCCCTGGCCGCTGCCCCCGCCGAGCTGGGCGCCTTCGATATC
GCCTGCCAGCGGCGCCTTGCCGAAATCACCGAGATGATCCACACGGCGTC
CCTCTTCCACGACGACGTCATCGACAAGGCCGACACGCGGCGCGGCGTGC
CCACCGTGAACAAGGTGTTCGGGAACAAGCTGGCGATCCTGGCGGGGGAC
TTTCTGCTGGCGCGAGCGTCGGTGAGCCTGGCGCGGCTGCGGAGCGTAGA
GGTAGTGGAGCTGCTGTCGACTGTCATCGAGCACCTCGTCAAGGGGGAGG
TGCTACAGATGCGCCCCGTCATGAACGGCACCCCGGCCTTTGAATATTAC
GTCCGCAAGAACTATTACAAGACGGGAAGCCTGATGGCGAACAGCTGCAA
AGCGGCGGCCATCTTAGGCCGACACGCACAGGACATCGCCCATGAGTACG
GCAAGCGGGTGGGACTGGCCTTCCAGCTGGTGGACGACGTGTTGGATTTT
GAGGGCAATGATTTCACCCTCGGCAAGCCCGCGCTCAACGACCTCCGCCA
GGGACTCGCCACCGCCCCCGTGCTGCTCGCCACGGAGCGTTCCCCGCACT
TGCAGCAGCTCATTAACAGAAAGTTCAACATGCCGGGGGATGTGGACGCG
GTGCTGCAGTTGGTGCACGAGTCGGGCAGCATCCAGCGCACCAAGGACAT
CGCCCGCGTGCAGGCCGAGCTCGCCACGGACGCCGTCATGCGCCTCTCCC
CGAGCCCCGAGCGGGACGCCCTTGTCAACCTCGCCTACAAGATTGTACAC
CGCAATCACTGA
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