mRNA_P-wetherbeei_contig13365.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13365.1.1
Unique NamemRNA_P-wetherbeei_contig13365.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig13365.1.1 vs. uniprot
Match: A0A836CAM3_9STRA (Phosphatase phospho-type n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAM3_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 8.560e-8
Identity = 19/41 (46.34%), Postives = 32/41 (78.05%), Query Frame = 1 
Query:   13 KRIVYLGDGRGDYCPITRLRPGDVALVRRSETKSFGLYERI 135
            +RI+Y+GDG GD+CP TR+  GD+ L R +E +++GL+ ++
Sbjct:  178 QRIIYVGDGGGDFCPATRMSAGDLVLARHAEDRAYGLWHKL 218
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BLAST of mRNA_P-wetherbeei_contig13365.1.1 vs. uniprot
Match: D8LNT8_ECTSI (Putative phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNT8_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 1.160e-7
Identity = 24/42 (57.14%), Postives = 29/42 (69.05%), Query Frame = 1 
Query:   16 RIVYLGDGRGDYCPITRLRPGDVALVRRSET--KSFGLYERI 135
            R++Y+GDG GDYCP  RLRPGD+ L R      + FGL ERI
Sbjct:  101 RVIYIGDGGGDYCPALRLRPGDLLLARDGGEGGRKFGLRERI 142
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BLAST of mRNA_P-wetherbeei_contig13365.1.1 vs. uniprot
Match: A0A7S3XXK4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXK4_HETAK)

HSP 1 Score: 52.8 bits (125), Expect = 5.620e-7
Identity = 22/43 (51.16%), Postives = 29/43 (67.44%), Query Frame = 1 
Query:    1 MERLKRIVYLGDGRGDYCPITRLRPGDVALVRRSETKSFGLYE 129
            + R  +IVY+GDG+GD+CP TRLRP DV L R    + F L +
Sbjct:   81 LARYTQIVYVGDGKGDFCPATRLRPQDVLLCRNGGPRQFELIK 123
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BLAST of mRNA_P-wetherbeei_contig13365.1.1 vs. uniprot
Match: A0A1Y1YYK1_9FUNG (Uncharacterized protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YYK1_9FUNG)

HSP 1 Score: 52.4 bits (124), Expect = 1.200e-6
Identity = 21/37 (56.76%), Postives = 28/37 (75.68%), Query Frame = 1 
Query:    4 ERLKRIVYLGDGRGDYCPITRLRPGDVALVRRSETKS 114
            E+  ++VY+GDG  D+CPITRLR  D+ALVRR+   S
Sbjct:  184 EKYAKVVYVGDGANDFCPITRLRANDIALVRRNRVLS 220
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BLAST of mRNA_P-wetherbeei_contig13365.1.1 vs. uniprot
Match: A0A2N1JAC9_9BASI (Uncharacterized protein n=1 Tax=Malassezia vespertilionis TaxID=2020962 RepID=A0A2N1JAC9_9BASI)

HSP 1 Score: 52.0 bits (123), Expect = 1.570e-6
Identity = 26/41 (63.41%), Postives = 30/41 (73.17%), Query Frame = 1 
Query:   13 KRIVYLGDGRGDYCPITRLRPGDVALVRRSETKSFGLYERI 135
            +RIVY+GDG  DYCPI RL P DVALVRR+     GL +RI
Sbjct:  188 QRIVYVGDGGNDYCPILRLGPQDVALVRRNR----GLAKRI 224
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BLAST of mRNA_P-wetherbeei_contig13365.1.1 vs. uniprot
Match: A0A6H5KIB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB4_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 2.260e-6
Identity = 23/42 (54.76%), Postives = 28/42 (66.67%), Query Frame = 1 
Query:   16 RIVYLGDGRGDYCPITRLRPGDVALVRRSET--KSFGLYERI 135
            R++Y+GDG GDYCP  RLRPGD+ L R      + FGL E I
Sbjct:  188 RVIYIGDGGGDYCPALRLRPGDLLLARDGGEGGRKFGLRELI 229
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BLAST of mRNA_P-wetherbeei_contig13365.1.1 vs. uniprot
Match: A0A834YQ94_9MAGN (Uncharacterized protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834YQ94_9MAGN)

HSP 1 Score: 51.6 bits (122), Expect = 2.550e-6
Identity = 24/45 (53.33%), Postives = 31/45 (68.89%), Query Frame = 1 
Query:    1 MERLKRIVYLGDGRGDYCPITRLRPGDVALVRRSETKSFGLYERI 135
            +E  KRI+YLGDGRGD+CP  +LR GD  + R    K+F +YE I
Sbjct:  167 VEGKKRIIYLGDGRGDFCPSLKLREGDYMMPR----KNFPVYELI 207
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BLAST of mRNA_P-wetherbeei_contig13365.1.1 vs. uniprot
Match: A0A5B7BHE1_DAVIN (Putative inorganic pyrophosphatase 3 n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7BHE1_DAVIN)

HSP 1 Score: 50.8 bits (120), Expect = 4.440e-6
Identity = 24/43 (55.81%), Postives = 30/43 (69.77%), Query Frame = 1 
Query:    7 RLKRIVYLGDGRGDYCPITRLRPGDVALVRRSETKSFGLYERI 135
            R KRI+YLGDGRGD+CP  +L  GD  + R    K+F L+ERI
Sbjct:  172 RKKRIIYLGDGRGDFCPSLKLGEGDHVMPR----KNFPLWERI 210
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BLAST of mRNA_P-wetherbeei_contig13365.1.1 vs. uniprot
Match: A0A0P1BJM2_9BASI (Uncharacterized protein n=2 Tax=Ceraceosorus TaxID=401624 RepID=A0A0P1BJM2_9BASI)

HSP 1 Score: 50.4 bits (119), Expect = 5.790e-6
Identity = 25/41 (60.98%), Postives = 29/41 (70.73%), Query Frame = 1 
Query:   13 KRIVYLGDGRGDYCPITRLRPGDVALVRRSETKSFGLYERI 135
            +RIVY+GDG  DYCP+ RL P DVALVRR      GL +RI
Sbjct:  194 ERIVYVGDGGNDYCPVLRLGPKDVALVRRYR----GLEKRI 230
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BLAST of mRNA_P-wetherbeei_contig13365.1.1 vs. uniprot
Match: A0A0M9VQ96_9BASI (Uncharacterized protein n=1 Tax=Malassezia pachydermatis TaxID=77020 RepID=A0A0M9VQ96_9BASI)

HSP 1 Score: 50.4 bits (119), Expect = 5.960e-6
Identity = 22/43 (51.16%), Postives = 30/43 (69.77%), Query Frame = 1 
Query:    7 RLKRIVYLGDGRGDYCPITRLRPGDVALVRRSETKSFGLYERI 135
            + +RI+Y+GDG  DYCP+ RL P D+A VRR+     GL +RI
Sbjct:  202 KYERIIYVGDGGNDYCPVKRLGPNDIAFVRRNR----GLAKRI 240
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13365.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CAM3_9STRA8.560e-846.34Phosphatase phospho-type n=1 Tax=Tribonema minus T... [more]
D8LNT8_ECTSI1.160e-757.14Putative phosphatase n=1 Tax=Ectocarpus siliculosu... [more]
A0A7S3XXK4_HETAK5.620e-751.16Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1Y1YYK1_9FUNG1.200e-656.76Uncharacterized protein n=1 Tax=Basidiobolus meris... [more]
A0A2N1JAC9_9BASI1.570e-663.41Uncharacterized protein n=1 Tax=Malassezia vespert... [more]
A0A6H5KIB4_9PHAE2.260e-654.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A834YQ94_9MAGN2.550e-653.33Uncharacterized protein n=1 Tax=Tetracentron sinen... [more]
A0A5B7BHE1_DAVIN4.440e-655.81Putative inorganic pyrophosphatase 3 n=1 Tax=David... [more]
A0A0P1BJM2_9BASI5.790e-660.98Uncharacterized protein n=2 Tax=Ceraceosorus TaxID... [more]
A0A0M9VQ96_9BASI5.960e-651.16Uncharacterized protein n=1 Tax=Malassezia pachyde... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13365contigP-wetherbeei_contig13365:6..146 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LNT8
Preferred namePHOSPHO1
PFAMsPut_Phosphatase
Model size141
Max annot lvl2759|Eukaryota
KEGG rclassRC00017
KEGG koko:K00924,ko:K06124,ko:K13248
KEGG ReactionR00173,R01911,R02494,R06870,R06871
KEGG Pathwayko00564,ko00750,ko01100,map00564,map00750,map01100
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0001501,GO:0001503,GO:0001958,GO:0003674,GO:0003824,GO:0003993,GO:0004427,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006629,GO:0006644,GO:0006646,GO:0006650,GO:0006656,GO:0006725,GO:0006732,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0007275,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009108,GO:0009229,GO:0009267,GO:0009605,GO:0009653,GO:0009887,GO:0009888,GO:0009987,GO:0009991,GO:0016036,GO:0016043,GO:0016311,GO:0016462,GO:0016787,GO:0016788,GO:0016791,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019637,GO:0021700,GO:0022607,GO:0030282,GO:0031012,GO:0031214,GO:0031667,GO:0031668,GO:0031669,GO:0032501,GO:0032502,GO:0033554,GO:0034641,GO:0035630,GO:0036075,GO:0042131,GO:0042357,GO:0042578,GO:0042594,GO:0043226,GO:0043227,GO:0043230,GO:0043931,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044272,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0045017,GO:0046337,GO:0046470,GO:0046474,GO:0046483,GO:0046486,GO:0048513,GO:0048705,GO:0048731,GO:0048799,GO:0048856,GO:0050896,GO:0051186,GO:0051188,GO:0051259,GO:0051262,GO:0051716,GO:0052731,GO:0052732,GO:0060348,GO:0060349,GO:0060350,GO:0065003,GO:0065010,GO:0070977,GO:0071496,GO:0071695,GO:0071704,GO:0071840,GO:0072527,GO:0072528,GO:0090407,GO:0097164,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
Exons1
Evalue1.9e-08
EggNOG OGsKOG3120@1|root,KOG3120@2759|Eukaryota
EC3.1.3.74,3.1.3.75
Descriptionphosphocholine phosphatase activity
Cds size141
COG categoryS
BRITEko00000,ko00001,ko01000,ko01009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185982.6249948-CDS-P-wetherbeei_contig13365:5..1461683185982.6249948-CDS-P-wetherbeei_contig13365:5..146Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13365 6..146 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13365.1.1prot_P-wetherbeei_contig13365.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13365 6..146 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13365.1.1

>prot_P-wetherbeei_contig13365.1.1 ID=prot_P-wetherbeei_contig13365.1.1|Name=mRNA_P-wetherbeei_contig13365.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=47bp
MERLKRIVYLGDGRGDYCPITRLRPGDVALVRRSETKSFGLYERIAA
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mRNA from alignment at P-wetherbeei_contig13365:6..146+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13365.1.1 ID=mRNA_P-wetherbeei_contig13365.1.1|Name=mRNA_P-wetherbeei_contig13365.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=141bp|location=Sequence derived from alignment at P-wetherbeei_contig13365:6..146+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGCGCTTAAAGCGCATCGTGTACCTCGGCGATGGGCGCGGCGACTA
TTGCCCCATCACGCGACTCCGGCCGGGCGACGTCGCGCTGGTGCGGCGAA
GCGAGACGAAGAGCTTCGGGTTGTACGAGAGGATCGCGGCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13365:6..146+

>mRNA_P-wetherbeei_contig13365.1.1 ID=mRNA_P-wetherbeei_contig13365.1.1|Name=mRNA_P-wetherbeei_contig13365.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=141bp|location=Sequence derived from alignment at P-wetherbeei_contig13365:6..146+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGCGCTTAAAGCGCATCGTGTACCTCGGCGATGGGCGCGGCGACTA
TTGCCCCATCACGCGACTCCGGCCGGGCGACGTCGCGCTGGTGCGGCGAA
GCGAGACGAAGAGCTTCGGGTTGTACGAGAGGATCGCGGCG
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