mRNA_P-wetherbeei_contig13356.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13356.1.1
Unique NamemRNA_P-wetherbeei_contig13356.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13356.1.1 vs. uniprot
Match: UPI00115D018C (endonuclease/exonuclease/phosphatase family protein n=1 Tax=Telmatospirillum sp. J64-1 TaxID=2502183 RepID=UPI00115D018C)

HSP 1 Score: 282 bits (721), Expect = 9.420e-92
Identity = 153/282 (54.26%), Postives = 172/282 (60.99%), Query Frame = 1
Query:    1 MTALLSWNIQYGKGVDGKLDLRRIVDTARAMGPFDVFCVQEVAINYAEMGGGADIDQAAQLAALLPGYAPFFAPGVDLAGPGGARRR-FGNMIFSRLPVLSFAARILPRPADPAVIHMPRSVAEALVETAQGPLRVLTTHLEFHGTVQRLAQAEALRTLHGEAAANDRHAQPTGPGPYVRLPAAIGTAVCGDFNFEPADDAYAAITKPFADGTEALCDAWTLRHPGRPHDPTCGIYDHDQWKQGAHARDFFFVSAGLAGRISAVEVDVKTPASDHQPVRLVL 843
            MT LL WNIQ  +GVDGK D  RI    R MG  DV C+QEVA    E+  G D  QA  LA   PGY P F   +D +G  G RR+ FGNMI SRLPVL      LP+P +P + HMPR   E +VE   GPLRV+TTHLEFH   QRLAQ E LR LH EA AN R       G Y   P      VCGDFN  P    +AA+T PFADGT  L DAW L  PGR H PT GI+D DQW QG H RDFFF+S  LAGR+  V V+ +T ASDHQP+RL L
Sbjct:    1 MTVLLCWNIQCCRGVDGKTDPARIAQVLRGMGEADVICLQEVARFDPEIDDGRD--QAGALAEAFPGYEPVFGAAIDRSGGSGGRRKAFGNMILSRLPVLQVFHHPLPQPPEPGIRHMPRQAVEVVVEGGAGPLRVITTHLEFHSLAQRLAQVERLRFLHQEAGANQRAPGADVGGTYALWPRPAELVVCGDFNALPDSPDHAAMTAPFADGTPGLLDAWRLAFPGREHAPTAGIFDADQWPQGPHCRDFFFLSEPLAGRVEKVWVNEETDASDHQPLRLDL 280          
BLAST of mRNA_P-wetherbeei_contig13356.1.1 vs. uniprot
Match: UPI0019F6A31D (Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019F6A31D)

HSP 1 Score: 279 bits (713), Expect = 1.590e-90
Identity = 141/282 (50.00%), Postives = 173/282 (61.35%), Query Frame = 1
Query:    1 MTALLSWNIQYGKGVDGKLDLRRIVDTARAMGPFDVFCVQEVAINYAEMGGGADIDQAAQLAALLPGYAPFFAPGVDLAGPG-GARRRFGNMIFSRLPVLSFAARILPRPADPAVIHMPRSVAEALVETAQGPLRVLTTHLEFHGTVQRLAQAEALRTLHGEAAANDRHAQPTGPGPYVRLPAAIGTAVCGDFNFEPADDAYAAITKPFADGTEALCDAWTLRHPGRPHDPTCGIYDHDQWKQGAHARDFFFVSAGLAGRISAVEVDVKTPASDHQPVRLVL 843
            MT +++WNIQ  KGVDG++   RI D AR  G  DV C+QEVA    +M GG   DQ A  AAL PG+ P F P +DL G   G RR+FGN+I SRLPV      +LP P +  +  M R   E +V+T  GPLR++TTHLE+H   QRLAQA ALR LH E+A N         G Y  LP      +CGDFN  P D  YA +  PFA+GT AL D W   H  RPHDPTCGI+D +QW QG H RDFF V+  +A R   +EV+++T ASDHQP+ L L
Sbjct:    1 MTRIVTWNIQCAKGVDGRVAPGRIADVARGWGEPDVICLQEVARFMPDMDGGEGADQVAVFAALFPGHEPIFGPALDLPGDAPGRRRQFGNLILSRLPVPQAFRHLLPFPPETGIKRMQRQATEVVVQTDAGPLRIVTTHLEYHSETQRLAQAGALRVLHAESADNANRPPAAADGLYAPLPRPASCVICGDFNIAPDDAVYARLVAPFANGTPALNDVWRALHGDRPHDPTCGIFDREQWPQGPHCRDFFLVTPDIAARAGRLEVNMETDASDHQPLLLEL 282          
BLAST of mRNA_P-wetherbeei_contig13356.1.1 vs. uniprot
Match: A0A370HL19_9HYPH (Endonuclease/exonuclease/phosphatase family metal-dependent hydrolase n=1 Tax=Microvirga subterranea TaxID=186651 RepID=A0A370HL19_9HYPH)

HSP 1 Score: 270 bits (690), Expect = 4.380e-87
Identity = 144/280 (51.43%), Postives = 173/280 (61.79%), Query Frame = 1
Query:   10 LLSWNIQYGKGVDGKLDLRRIVDTARAMGPFDVFCVQEVAINYAEMGGGADIDQAAQLAALLPGYAPFFAPGVDLAGPGGARRRFGNMIFSRLPVLSFAARILPRPADPAVIHMPRSVAEALVETAQGPLRVLTTHLEFHGTVQRLAQAEALRTLHGEAAANDRHA-QPTGPGPYVRLPAAIGTAVCGDFNFEPADDAYAAITKPFADGTEALCDAWTLRHPGRPHDPTCGIYDHDQWKQGAHARDFFFVSAGLAGRISAVEVDVKTPASDHQPVRLVLG 846
            L++WNIQ+G G DGK+DL+RIV+TAR++   DVFC QE++  +    GG D  Q   LA LLPGY P F P V++    G  + FGNMI SRLPVL   + +LP PAD  V  M R   EA+V +  GP+RV T HLEFH   QRLAQ   LR LH E     R   + T  GPY  + A IG  VCGDFN  P +  Y  + KP + G  A  DAWT+ HPG PHDPT G+ D +QW QG H RDF FV+  LA RIS V VDV T ASDHQP+ L L 
Sbjct:    3 LVTWNIQWGLGCDGKVDLKRIVETARSLCDADVFCFQEISRGFPTQDGGED--QPTILADLLPGYHPIFRPAVEMIDRDGDLQVFGNMILSRLPVLQITSHMLPWPAD-EVRSMQRQALEAVVVSDFGPMRVTTCHLEFHSLAQRLAQVGRLRELHEEGTKRSRLMFRDTSAGPYRTIEAPIGAIVCGDFNLTPDEVTYTQMQKPLSSGIPAFVDAWTVLHPGVPHDPTAGVGDAEQWPQGPHCRDFVFVTENLAPRISEVRVDVNTTASDHQPIALTLS 279          
BLAST of mRNA_P-wetherbeei_contig13356.1.1 vs. uniprot
Match: A0A7V2T6D4_9PROT (Endonuclease n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7V2T6D4_9PROT)

HSP 1 Score: 270 bits (689), Expect = 6.850e-87
Identity = 134/279 (48.03%), Postives = 170/279 (60.93%), Query Frame = 1
Query:   10 LLSWNIQYGKGVDGKLDLRRIVDTARAMGPFDVFCVQEVAINYAEMGGGADIDQAAQLAALLPGYAPFFAPGVDLA-GPGGARRRFGNMIFSRLPVLSFAARILPRPADPAVIHMPRSVAEALVETAQGPLRVLTTHLEFHGTVQRLAQAEALRTLHGEAAANDRHAQPTGPGPYVRLPAAIGTAVCGDFNFEPADDAYAAITKPFADGTEALCDAWTLRHPGRPHDPTCGIYDHDQWKQGAHARDFFFVSAGLAGRISAVEVDVKTPASDHQPVRLVL 843
            +LSWNIQ G+GVDG++DL RI    RA G  D+ C+QEVA +  E+ GGA  DQ A LA L P +   + P +++  G     RRFGN++ SRLPV       LP+PADP ++HMPR   E +V  A GPLRV+TTHLE+H   QRLAQ   LR L  EAA N       G GPY   P      +CGD N  P D+A+  +  P  DG     DAW+L H  RPH PTCGI+D  QW +G H RDFF V+  L G+++ + +D +T ASDHQP+RL L
Sbjct:    3 VLSWNIQCGRGVDGRVDLERIARVIRANGDPDLICLQEVASHMPELDGGAGGDQPAALARLFPDHEAVYGPALEVRDGEASPYRRFGNLVLSRLPVRQIFRHPLPQPADPGLLHMPRQATELVVAAASGPLRVITTHLEYHSARQRLAQILRLRELQQEAADNAARPPQAGTGPYAARPRPASCVLCGDLNCRPEDEAFRRLLDPLPDGLPGFRDAWSLAHGARPHAPTCGIFDRVQWPEGPHCRDFFLVAGDLEGKVADLRIDGETDASDHQPLRLTL 281          
BLAST of mRNA_P-wetherbeei_contig13356.1.1 vs. uniprot
Match: A0A5M8AAW6_9BURK (Endonuclease n=3 Tax=Cupriavidus TaxID=106589 RepID=A0A5M8AAW6_9BURK)

HSP 1 Score: 268 bits (686), Expect = 2.150e-86
Identity = 148/286 (51.75%), Postives = 174/286 (60.84%), Query Frame = 1
Query:   10 LLSWNIQYGKGVDGKLDLRRIVDTARAMGPFDVFCVQEVAINYAEMGGGADIDQAAQLAALLPGYAPFFAPGVDLAGPGGARRRFGNMIFSRLPVLSFAARILPRPADPAVIHMPRSVAEALVETAQGPLRVLTTHLEFHGTVQRLAQAEALRTLHGEAAANDRHAQPTGP-----GPYV---RLPAAIGTAVCGDFNFEPADDAYAAITKPFADGTEALCDAWTLRHPGRPHDPTCGIYDHDQWKQGAHARDFFFVSAGLAGRISAVEVDVKTPASDHQPVRLVL 843
            L+SWNIQ+G+G DG++DL R V T RA+  FDV C+QEV   + EM G    DQ A+LAALLPGY   FAPGVD  GP G  R+FGN+I +RLPV       LP PADP V  MPR   EA V      LR++ THLE++  +QR AQAEALR  H EA     HA   GP     GP+    R P+AI   +CGDFN +P D AY  +T PF DGT A  DAW   HPGRPH PTC +YD  QW +   A DF  V+  L  R+   EVD  T ASDHQPV L L
Sbjct:    3 LISWNIQWGRGCDGEVDLARTVSTLRALADFDVLCLQEVTRGFGEMRGNPGADQVAELAALLPGYHLLFAPGVDRFGPDGVPRQFGNVIATRLPVCEVFRHALPWPADPTVASMPRVALEATVIAGTQRLRIICTHLEYYSALQRNAQAEALRAWHAEACG---HAARPGPAEQRFGPFTPEARPPSAI---LCGDFNSKPGDTAYLRLTAPFDDGTPAWRDAWLHLHPGRPHAPTCALYDKAQWDEPPFACDFMLVTEDLLERVVRCEVDGSTQASDHQPVLLSL 282          
BLAST of mRNA_P-wetherbeei_contig13356.1.1 vs. uniprot
Match: A0A1G6INU1_9BURK (Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family n=1 Tax=Cupriavidus sp. YR651 TaxID=1855315 RepID=A0A1G6INU1_9BURK)

HSP 1 Score: 266 bits (679), Expect = 2.310e-85
Identity = 136/283 (48.06%), Postives = 172/283 (60.78%), Query Frame = 1
Query:   10 LLSWNIQYGKGVDGKLDLRRIVDTARAMGPFDVFCVQEVAINYAEMGGGADIDQAAQLAALLPGYAPFFAPGVDLAGPGGARRRFGNMIFSRLPVLSFAARILPRPADPAVIHMPRSVAEALVETAQGPLRVLTTHLEFHGTVQRLAQAEALRTLHGEAAANDRHAQPTG-----PGPYVRLPAAIGTAVCGDFNFEPADDAYAAITKPFADGTEALCDAWTLRHPGRPHDPTCGIYDHDQWKQGAHARDFFFVSAGLAGRISAVEVDVKTPASDHQPVRLVL 843
            L+SWNIQ+G+G DGK+DL R +DT R+M   DV C+QEV   + +M G  + DQ A+L ALLPGY   FAPGVD  G  G  R+FGN++ +RLPV       LP PADP V  MPR   E  V+    PLR++ THLE++   QR AQAEALR  H +A     HA+  G     PGP+   P      +CGDFN +P D AY  +  P+AD T    DAW  RHPG+PH PTC +YD  QWK+   A DF FV+  L G++   EV+  T ASDHQP+ L +
Sbjct:    3 LISWNIQWGRGADGKVDLARTIDTLRSMADADVLCLQEVTRGFTDMPGNPNRDQIAELTALLPGYRVLFAPGVDRTGGDGGHRQFGNVVATRLPVHEIFRHALPWPADPDVASMPRVALEVTVQIGTNPLRIVCTHLEYYSQTQRTAQAEALRDWHAQAC---DHARRPGRSENRPGPFTPEPRPAEAILCGDFNSKPDDVAYQRMLAPYADTTPNWRDAWVHRHPGQPHAPTCALYDKAQWKEPPFACDFVFVTENLLGKVLRCEVNGDTDASDHQPIHLTV 282          
BLAST of mRNA_P-wetherbeei_contig13356.1.1 vs. uniprot
Match: A0A5P2H1R3_9BURK (Endonuclease n=1 Tax=Cupriavidus pauculus TaxID=82633 RepID=A0A5P2H1R3_9BURK)

HSP 1 Score: 264 bits (674), Expect = 1.500e-84
Identity = 140/284 (49.30%), Postives = 173/284 (60.92%), Query Frame = 1
Query:   10 LLSWNIQYGKGVDGKLDLRRIVDTARAMGPFDVFCVQEVAINYAEMGGGADIDQAAQLAALLPGYAPFFAPGVDLAGPGGARRRFGNMIFSRLPVLSFAARILPRPADPAVIHMPRSVAEALVET--AQGP--LRVLTTHLEFHGTVQRLAQAEALRTLHGEAAANDRHA--QPTGPGPYVRLPAAIGTAVCGDFNFEPADDAYAAITKPFADGTEALCDAWTLRHPGRPHDPTCGIYDHDQWKQGAHARDFFFVSAGLAGRISAVEVDVKTPASDHQPVRLVL 843
            LL+WN+Q+G+G DGK+DL R V T R M   DV C+QE+   + ++ GG   DQ A+L ALLPGY   FAPGVD  G  GA R+FGN I +RLPV       LP PADP+V  MPR   E  VET  A  P  +RV+TTHLE++   QR AQAEALR  H EA A+ RH      GPGP+   P      +CGDFN +  D AY  +  P+ DGT    DAW   HPG+PH PTC +YD +QW +   A DF FV+  L  R+   EV+ +TP SDHQP+ L L
Sbjct:    3 LLNWNVQWGRGADGKVDLARTVGTLREMADADVICLQEITRGFGDIAGGPQRDQVAELTALLPGYRILFAPGVDRYGNDGAPRQFGNAIATRLPVREVFRHALPWPADPSVPSMPRVALEVTVETGTAAAPQRVRVITTHLEYYSASQRAAQAEALRVWHAEACAHARHPGRDEKGPGPFEPEPRPTQAILCGDFNSKVDDVAYRHMLVPYGDGTPNWRDAWVHTHPGQPHAPTCALYDREQWNEPPFACDFVFVTEDLRDRVKRCEVNGETPHSDHQPIHLSL 286          
BLAST of mRNA_P-wetherbeei_contig13356.1.1 vs. uniprot
Match: UPI001E2AD013 (endonuclease/exonuclease/phosphatase family protein n=1 Tax=Microvirga sp. SM2 TaxID=2883126 RepID=UPI001E2AD013)

HSP 1 Score: 263 bits (673), Expect = 1.750e-84
Identity = 138/280 (49.29%), Postives = 174/280 (62.14%), Query Frame = 1
Query:   10 LLSWNIQYGKGVDGKLDLRRIVDTARAMGPFDVFCVQEVAINYAEMGGGADIDQAAQLAALLPGYAPFFAPGVDLAGPGGARRRFGNMIFSRLPVLSFAARILPRPADPAVIHMPRSVAEALVETAQGPLRVLTTHLEFHGTVQRLAQAEALRTLHGEAAANDRHA-QPTGPGPYVRLPAAIGTAVCGDFNFEPADDAYAAITKPFADGTEALCDAWTLRHPGRPHDPTCGIYDHDQWKQGAHARDFFFVSAGLAGRISAVEVDVKTPASDHQPVRLVLG 846
            L++WNIQ+G G DG++DL RIV+TA+++   DVFC QE++  + +  GG D  Q A LA LLPGY P F P  ++    G  + FGNMI SRLPVL   + +LP PA      M R   EA+V T+ GP+RV+TTHLEFH   QR AQ E LR +H E+    + +      GPY      +GT +CGDFN EP DD YA I KP A G     DAWT  H   PH PT GI D ++W QG H RD+ FV+  LAGRI+ V+VDV+T ASDHQP+ L L 
Sbjct:    3 LVTWNIQWGLGCDGRVDLARIVETAQSLSDADVFCFQEISRGFPDQDGGED--QPAILADLLPGYMPIFRPATEMTDAEGNLQIFGNMILSRLPVLQITSHMLPWPATECR-SMQRQALEAVVRTSFGPVRVVTTHLEFHSVEQRSAQIERLRRIHEESTRRSKLSFTEDSAGPYRTRSRPLGTILCGDFNLEPHDDLYAEIIKPIAPGIPGFADAWTAYHGNIPHAPTAGIADAERWPQGPHCRDYIFVTDNLAGRIAGVQVDVETTASDHQPIALELS 279          
BLAST of mRNA_P-wetherbeei_contig13356.1.1 vs. uniprot
Match: UPI001B08E39C (endonuclease/exonuclease/phosphatase family protein n=1 Tax=Cupriavidus yeoncheonensis TaxID=1462994 RepID=UPI001B08E39C)

HSP 1 Score: 263 bits (673), Expect = 1.870e-84
Identity = 137/280 (48.93%), Postives = 173/280 (61.79%), Query Frame = 1
Query:   10 LLSWNIQYGKGVDGKLDLRRIVDTARAMGPFDVFCVQEVAINYAEMGGGADIDQAAQLAALLPGYAPFFAPGVDLAGPGGARRRFGNMIFSRLPVLSFAARILPRPADPAVIHMPRSVAEALVETAQGPLRVLTTHLEFHGTVQRLAQAEALRTLHGEAAANDRHA--QPTGPGPYVRLPAAIGTAVCGDFNFEPADDAYAAITKPFADGTEALCDAWTLRHPGRPHDPTCGIYDHDQWKQGAHARDFFFVSAGLAGRISAVEVDVKTPASDHQPVRLVL 843
            L+SWNIQ+G+G DG++DL R V T RAM   DV C+QEV   + ++ G    DQ A+LAALLPGY   FAPGVD  G  G+ R+FGN+I +RLPV       LP P DP V  MPR   EA V++    LRV+ THLE++   QR AQA+ALR  H EA    R      + PGP+          +CGDFN +P+D AY  + +PF DGT    DAW LRHPG+PH PTC +YD +QW +   A DF FV+  LAG++S  EV+  T  SDHQP+ L L
Sbjct:    3 LISWNIQWGRGADGQVDLSRGVATMRAMADADVICLQEVTRGFGDLRGAPGADQVAELAALLPGYRVMFAPGVDRFGGDGSPRQFGNLIATRLPVHEVFRHALPWPPDPDVASMPRVALEATVQSGSKRLRVICTHLEYYSANQRAAQADALRNWHAEACGQARRPGRSESTPGPFTPEARPSEAVLCGDFNSKPSDIAYRRMLEPFDDGTTPWRDAWLLRHPGQPHAPTCAMYDKEQWPEPPFACDFVFVTENLAGQVSRCEVNAATKDSDHQPIVLSL 282          
BLAST of mRNA_P-wetherbeei_contig13356.1.1 vs. uniprot
Match: A0A375IY01_9BURK (Endo/exonuclease/phosphatase domain-containing protein n=25 Tax=Cupriavidus TaxID=106589 RepID=A0A375IY01_9BURK)

HSP 1 Score: 263 bits (672), Expect = 2.650e-84
Identity = 140/283 (49.47%), Postives = 172/283 (60.78%), Query Frame = 1
Query:   10 LLSWNIQYGKGVDGKLDLRRIVDTARAMGPFDVFCVQEVAINYAEMGGGADIDQAAQLAALLPGYAPFFAPGVDLAGPGGARRRFGNMIFSRLPVLSFAARILPRPADPAVIHMPRSVAEALVETAQGPLRVLTTHLEFHGTVQRLAQAEALRTLHGEAAANDRHAQPTG-----PGPYVRLPAAIGTAVCGDFNFEPADDAYAAITKPFADGTEALCDAWTLRHPGRPHDPTCGIYDHDQWKQGAHARDFFFVSAGLAGRISAVEVDVKTPASDHQPVRLVL 843
            L+SWNIQ+G+G DG++DL R V+T RAM   DV C+QEV   + E+ G    DQ ++L ALLPGY   +AP VD  G  GA R+FGN+I +RLPV       LP PADP V  MPR   EA VE     LRV+ THLE++   QR AQAEALR  H EA A   HA+  G     PGP+   P  +   +CGDFN +P D AY  + +PF DGT A  DAW   HPG PH PTC ++D +QW +   A DF  V+  LA RI   EV+  T ASDHQP+ L L
Sbjct:    3 LISWNIQWGRGADGRVDLARQVETLRAMADADVLCLQEVTRGFGELRGEPGADQVSELTALLPGYHLLYAPAVDRRGRTGALRQFGNLIATRLPVREVFRHALPWPADPEVASMPRVALEATVEAGSARLRVICTHLEYYSATQRTAQAEALRDWHAEACA---HARRPGRSEQWPGPFTPEPRPVEAILCGDFNSKPDDVAYRRMLEPFDDGTPAWRDAWLHAHPGLPHAPTCALHDKEQWPEPPFACDFMLVTEPLAARIRRCEVNADTDASDHQPILLSL 282          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13356.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00115D018C9.420e-9254.26endonuclease/exonuclease/phosphatase family protei... [more]
UPI0019F6A31D1.590e-9050.00Endonuclease/exonuclease/phosphatase family protei... [more]
A0A370HL19_9HYPH4.380e-8751.43Endonuclease/exonuclease/phosphatase family metal-... [more]
A0A7V2T6D4_9PROT6.850e-8748.03Endonuclease n=1 Tax=Rhodospirillales bacterium Ta... [more]
A0A5M8AAW6_9BURK2.150e-8651.75Endonuclease n=3 Tax=Cupriavidus TaxID=106589 RepI... [more]
A0A1G6INU1_9BURK2.310e-8548.06Metal-dependent hydrolase, endonuclease/exonucleas... [more]
A0A5P2H1R3_9BURK1.500e-8449.30Endonuclease n=1 Tax=Cupriavidus pauculus TaxID=82... [more]
UPI001E2AD0131.750e-8449.29endonuclease/exonuclease/phosphatase family protei... [more]
UPI001B08E39C1.870e-8448.93endonuclease/exonuclease/phosphatase family protei... [more]
A0A375IY01_9BURK2.650e-8449.47Endo/exonuclease/phosphatase domain-containing pro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13356contigP-wetherbeei_contig13356:6..854 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog381666.H16_A2371
PFAMsExo_endo_phos
Model size849
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue8.72e-85
EggNOG OGsCOG3568@1|root,COG3568@2|Bacteria,1R9NP@1224|Proteobacteria,2WGEU@28216|Betaproteobacteria,1K0J8@119060|Burkholderiaceae
Descriptionendonuclease
Cds size849
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185982.4791765-CDS-P-wetherbeei_contig13356:5..8541683185982.4791765-CDS-P-wetherbeei_contig13356:5..854Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13356 6..854 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13356.1.1prot_P-wetherbeei_contig13356.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13356 6..854 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13356.1.1

>prot_P-wetherbeei_contig13356.1.1 ID=prot_P-wetherbeei_contig13356.1.1|Name=mRNA_P-wetherbeei_contig13356.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=283bp
MTALLSWNIQYGKGVDGKLDLRRIVDTARAMGPFDVFCVQEVAINYAEMG
GGADIDQAAQLAALLPGYAPFFAPGVDLAGPGGARRRFGNMIFSRLPVLS
FAARILPRPADPAVIHMPRSVAEALVETAQGPLRVLTTHLEFHGTVQRLA
QAEALRTLHGEAAANDRHAQPTGPGPYVRLPAAIGTAVCGDFNFEPADDA
YAAITKPFADGTEALCDAWTLRHPGRPHDPTCGIYDHDQWKQGAHARDFF
FVSAGLAGRISAVEVDVKTPASDHQPVRLVLG*
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mRNA from alignment at P-wetherbeei_contig13356:6..854-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13356.1.1 ID=mRNA_P-wetherbeei_contig13356.1.1|Name=mRNA_P-wetherbeei_contig13356.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=849bp|location=Sequence derived from alignment at P-wetherbeei_contig13356:6..854- (Phaeothamnion wetherbeei SAG_119_79)
ATGACCGCCCTGCTTTCGTGGAACATCCAGTACGGCAAGGGGGTCGACGG CAAACTCGACCTCAGGCGCATCGTCGATACCGCCCGCGCGATGGGACCGT TCGACGTGTTTTGCGTGCAGGAGGTGGCGATCAACTACGCCGAGATGGGC GGCGGTGCCGACATCGACCAGGCGGCCCAGCTCGCCGCCCTGCTGCCGGG CTACGCGCCGTTCTTCGCACCCGGTGTGGATCTCGCCGGGCCCGGCGGCG CGCGCCGGCGCTTCGGCAACATGATCTTCTCGCGCCTGCCCGTCCTGTCG TTCGCCGCGCGCATCCTGCCGCGCCCGGCCGATCCGGCGGTGATCCACAT GCCGCGCAGCGTCGCCGAAGCGCTGGTCGAGACCGCGCAGGGGCCGCTGC GCGTGTTGACGACGCATCTCGAATTCCACGGCACGGTGCAGCGCCTGGCG CAGGCCGAGGCGCTGCGCACGCTCCACGGCGAGGCGGCGGCGAACGACAG GCACGCCCAGCCGACCGGGCCGGGGCCCTATGTGCGGCTGCCCGCCGCGA TCGGCACGGCGGTGTGCGGCGATTTCAATTTCGAGCCGGCCGACGACGCC TACGCCGCGATCACCAAGCCCTTCGCCGACGGCACCGAGGCGCTTTGCGA TGCGTGGACCCTGCGCCATCCGGGCAGGCCGCACGACCCGACCTGCGGCA TCTACGACCACGACCAGTGGAAACAGGGTGCGCACGCACGCGACTTCTTC TTCGTGTCGGCGGGCCTCGCCGGGCGGATCTCGGCGGTCGAGGTGGACGT CAAGACGCCCGCCTCCGACCACCAGCCCGTGCGGCTCGTGCTCGGCTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13356:6..854-

>mRNA_P-wetherbeei_contig13356.1.1 ID=mRNA_P-wetherbeei_contig13356.1.1|Name=mRNA_P-wetherbeei_contig13356.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=849bp|location=Sequence derived from alignment at P-wetherbeei_contig13356:6..854- (Phaeothamnion wetherbeei SAG_119_79)
ATGACCGCCCTGCTTTCGTGGAACATCCAGTACGGCAAGGGGGTCGACGG
CAAACTCGACCTCAGGCGCATCGTCGATACCGCCCGCGCGATGGGACCGT
TCGACGTGTTTTGCGTGCAGGAGGTGGCGATCAACTACGCCGAGATGGGC
GGCGGTGCCGACATCGACCAGGCGGCCCAGCTCGCCGCCCTGCTGCCGGG
CTACGCGCCGTTCTTCGCACCCGGTGTGGATCTCGCCGGGCCCGGCGGCG
CGCGCCGGCGCTTCGGCAACATGATCTTCTCGCGCCTGCCCGTCCTGTCG
TTCGCCGCGCGCATCCTGCCGCGCCCGGCCGATCCGGCGGTGATCCACAT
GCCGCGCAGCGTCGCCGAAGCGCTGGTCGAGACCGCGCAGGGGCCGCTGC
GCGTGTTGACGACGCATCTCGAATTCCACGGCACGGTGCAGCGCCTGGCG
CAGGCCGAGGCGCTGCGCACGCTCCACGGCGAGGCGGCGGCGAACGACAG
GCACGCCCAGCCGACCGGGCCGGGGCCCTATGTGCGGCTGCCCGCCGCGA
TCGGCACGGCGGTGTGCGGCGATTTCAATTTCGAGCCGGCCGACGACGCC
TACGCCGCGATCACCAAGCCCTTCGCCGACGGCACCGAGGCGCTTTGCGA
TGCGTGGACCCTGCGCCATCCGGGCAGGCCGCACGACCCGACCTGCGGCA
TCTACGACCACGACCAGTGGAAACAGGGTGCGCACGCACGCGACTTCTTC
TTCGTGTCGGCGGGCCTCGCCGGGCGGATCTCGGCGGTCGAGGTGGACGT
CAAGACGCCCGCCTCCGACCACCAGCCCGTGCGGCTCGTGCTCGGCTAG
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