mRNA_P-wetherbeei_contig13341.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13341.2.1
Unique NamemRNA_P-wetherbeei_contig13341.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13341.2.1 vs. uniprot
Match: A0A7C3C5A0_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Bryobacterales bacterium TaxID=2026791 RepID=A0A7C3C5A0_9BACT)

HSP 1 Score: 77.8 bits (190), Expect = 1.250e-14
Identity = 58/174 (33.33%), Postives = 84/174 (48.28%), Query Frame = 1
Query:   13 IPLAFTSSGELKLPNHCHKIDGPFLCRDCGNEVILKKGLIKCAHFAHKAREVHGNGGTSCPSESTIHLAAKEIVFQTFS-WIS-------TYRKCPSC----DEAGPSTRVVGARAKKEEPLDGFQIDVAIF--DASGVVTTV-FEVCHTHESTRTKVAHFKDTLVEVDASAIL 489
            IP A   SG++  P    K DGPFLC  C   V+L++G ++ AHFAH        G T C  E+ +H AAK  V Q  + W+          R+CP C    ++A P + V G R ++  P  G+  DVA+   D   V   V    CH  E+T+ +  +     +E+DA  +L
Sbjct:   20 IPYALAPSGKIVDPEDARKEDGPFLCPACRGRVLLRRGPVRRAHFAHP-------GQTRCSPETALHAAAKRRVAQAVAAWLDGTGPRPRIERECPICFAPYEQAVPDS-VRGVRVEQALP-SGYVADVALLGGDPRHVRAAVEIRACHAVETTKKR--NIGVPYLELDAEEVL 182          
BLAST of mRNA_P-wetherbeei_contig13341.2.1 vs. uniprot
Match: A0A7Y2L5X6_9THEO (Uncharacterized protein n=1 Tax=Caldanaerobacter subterraneus TaxID=911092 RepID=A0A7Y2L5X6_9THEO)

HSP 1 Score: 68.2 bits (165), Expect = 1.590e-10
Identity = 51/175 (29.14%), Postives = 77/175 (44.00%), Query Frame = 1
Query:    7 VLIPLAFTSSGELKLPNHCHKIDGPFLCRDCGNEVILKKGLIKCAHFAHKAREVHGNGGTSCPSESTIHLAAKEIVFQTF-SWISTYRK-------CPSCDEAGPSTRVVGARAKKEEPL------DGFQIDVAIFDASGVVTTVFEVCHTHESTRTKVAHFKDTLVEVDASAIL 489
            +LIP A    G L       K +  + C  CG +V+L+KG ++ AHFAHKA          C  E+ IH  AK ++ Q   SW    +K       CP C    PS   +  + + E+ L      +G+  DVA+  A+  +  V E+  TH   + K        VE+D   ++
Sbjct:    1 MLIPYAVDQEGNLYNAKEAGK-EKQYYCPSCGEKVVLRKGKVRTAHFAHKAN-------AKCSEETVIHKTAKLLIQQVIQSWKKENKKAPVIIVKCPIC--YNPSEVRIVEQIRIEDALLEYRLPEGYIADVALI-ANNKIKMVIEIKVTHSVEQEKQERINIPFVELDGYEVI 164          
BLAST of mRNA_P-wetherbeei_contig13341.2.1 vs. uniprot
Match: A0A6C0C0J5_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0C0J5_9ZZZZ)

HSP 1 Score: 68.2 bits (165), Expect = 2.410e-10
Identity = 45/162 (27.78%), Postives = 71/162 (43.83%), Query Frame = 1
Query:   13 IPLAFTSSGELKLPNHCHKIDGPFLCRDCGNEVILKKGLIKCAHFAHKAREVHGNGGTSCPS--ESTIHLAAKEIVFQTFSWISTYRKCPSCDEAGPSTRVVGARAKKEEPLDG--FQIDVAIFDASGVVTTVFEVCHTHESTRTKVAH----FKDTLVEVD 474
            +P+A    G  +L       D PF C +CG   +L+KGL +  HFAHKA      G  +C    E  IH   K  + +    I+  + C  C E     +   A  +++   +G  +++D+   +       V EV HTH  +  K+A     F D + EV+
Sbjct:    7 VPIAVDRHGARRLAISTTNCDEPFHCEECGAACVLRKGLQRSHHFAHKAA-TDDTGAAACSGGGEGAIHETCKLFIKENIGSIAFTKVCSECGEEVVRWKGTEAAFEQDVVTNGGRYRVDLLAHNDMDSTGAVVEVLHTHRCSGGKLADLASTFGDNVFEVE 167          
BLAST of mRNA_P-wetherbeei_contig13341.2.1 vs. uniprot
Match: A0A6B1EUC1_9BACT (Uncharacterized protein n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A6B1EUC1_9BACT)

HSP 1 Score: 65.5 bits (158), Expect = 1.510e-9
Identity = 49/171 (28.65%), Postives = 75/171 (43.86%), Query Frame = 1
Query:   13 IPLAFTSSGELKLPNHCHKIDGPFLCRDCGNEVILKKGLIKCAHFAHKAREVHGNGGTSCPSESTIHLAAKEIVFQTFS-WISTY-------RKCPSC----DEAGPSTRVVGARAKKEEPLDGFQIDVAIFDASGVVTTVFEVCHTHESTRTKVAHFKDTLVEVDASAIL 489
            +P AF     L  P    K   P+ C  C + VIL+KG IK AHFAHKA E+       C  E+ +H  AK+++    S W S         R C  C    D+  P  ++ GA  +     DGF +DVA+   +     + E+  +H   + K        +E++   ++
Sbjct:    9 VPFAFDDEKRLHAPQTAEK-GKPYFCPACQDTVILRKGEIKTAHFAHKASEI-------CNQETILHKTAKQLIVDVISDWKSDKTDAPVLKRTCEICRQSKDQLLPD-KIEGAMLEYRM-ADGFVVDVALMVENQPAAAI-EIRVSHAVDKNKAKLLSVPFIELEGQKVI 168          
BLAST of mRNA_P-wetherbeei_contig13341.2.1 vs. uniprot
Match: A0A7C6RF56_9FIRM (Uncharacterized protein n=1 Tax=Clostridia bacterium TaxID=2044939 RepID=A0A7C6RF56_9FIRM)

HSP 1 Score: 62.0 bits (149), Expect = 3.810e-9
Identity = 46/150 (30.67%), Postives = 72/150 (48.00%), Query Frame = 1
Query:    7 VLIPLAFTSSGELKLPNHCHKIDGPFLCRDCGNEVILKKGLIKCAHFAHKAREVHGNGGTSCPSESTIHLAAKEIVFQTF-SWISTYRKCP----SCDEAGPSTRV-VGARAKKEEPL------DGFQIDVAIFDASGVVTTVFEVCHTH 420
            +LIP A  +   L    +  K    + C  CG EVIL+KG I+ AHFAHK+         +C  E+ IH  AK ++ QT  SW    +K P    +C   G  T + +  + + E+ +      +G+  D+A+  A+  +  V E+  TH
Sbjct:    1 MLIPYAIDNKRRLYSAKNAEK-GKQYYCPSCGEEVILRKGEIRIAHFAHKSN-------ANCSEETVIHKTAKLLIQQTIQSWKKGDKKAPIIRVNCPICGKPTYLEILEQMQIEDAVLEYRLPEGYIADIALI-ANNKIKMVIEIKVTH 141          
BLAST of mRNA_P-wetherbeei_contig13341.2.1 vs. uniprot
Match: A0A6C0K9A6_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0K9A6_9ZZZZ)

HSP 1 Score: 62.4 bits (150), Expect = 2.110e-8
Identity = 49/151 (32.45%), Postives = 70/151 (46.36%), Query Frame = 1
Query:   31 SSGELKLPNHCHKIDGPFLCRDCGNEVILKKGLIKCAHFAHKAREVHGNGGTSC----PSESTIHLAAKEIVFQTFSWISTYRKCPSCDEAGPSTRVV----------GARAKKE--EPLDGFQIDVAIFDASGVVTTVFEVCHTHESTRT 435
            SS E   P +  K D  + C DC N+VIL+KG I+ AHFAH     H    T      P+ES IH  AK ++ +  +     + C  C   G    V           G +A  E  +P + +  DVA+ + +G V  +FE+ HTH +  T
Sbjct:   13 SSNEYTTPTNATK-DKQYKCVDCNNKVILRKGTIRKAHFAH-----HSQTNTCSYYDHPNESQIHKDAKLLMAKMLTEKKLLQFCWDCLNCGSQAYVFQDCPSIVYKEGDQAVLEYRDPNNKWVADVALVN-NGEVRYIFEIKHTHATIST 156          
BLAST of mRNA_P-wetherbeei_contig13341.2.1 vs. uniprot
Match: UPI001680E899 (hypothetical protein n=1 Tax=Pseudanabaena sp. FACHB-1998 TaxID=2692858 RepID=UPI001680E899)

HSP 1 Score: 60.8 bits (146), Expect = 6.120e-8
Identity = 36/139 (25.90%), Postives = 65/139 (46.76%), Query Frame = 1
Query:   73 DGPFLCRDCGNEVILKKGLIKCAHFAHKAREVHGNGGTSCPSESTIHLAAKEIVFQTFSW-------ISTYRKCPSCDEAGPSTRVVGAR-AKKEEPLDGFQIDVAIFDASGVVTTVFEVCHTHESTRTKVAHFKDTLV 465
            D  + C DC    IL+KGL K  HFAHK+         +C  ES +H + K ++     +       ++ + KC  C++      +  A   + E  L   + D+A+ D +G    V EV  TH+ +++ + ++++  V
Sbjct:   26 DSSYYCPDCKQPFILRKGLKKRPHFAHKSVS------PNCTPESALHYSFKTLLHNKIQYHLDQNLPLNIHWKCNICNDVHKGNLLKKATMVRLEHDLGVCRPDIALLDKNGKAIAVIEVVVTHKPSQSAIEYYRNNKV 158          
BLAST of mRNA_P-wetherbeei_contig13341.2.1 vs. uniprot
Match: A0A800E6S0_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800E6S0_9BACT)

HSP 1 Score: 57.0 bits (136), Expect = 1.620e-6
Identity = 37/123 (30.08%), Postives = 52/123 (42.28%), Query Frame = 1
Query:   97 CGNEVILKKGLIKCAHFAHKAREVHGNGGTSCPSESTIHLAAKEIVFQTFSWISTYRKCPSCDEA--------GPSTRVVGARAKKEEPLDGFQIDVAIFDASGVVTTVFEVCHTHESTRTKV 441
            C + V++K+G +  AHFAHKA      G      ES +H+A KE +    S    +R   SC E         G S          +     + ID      SG V+  FEV HTH++   K+
Sbjct:   21 CDDPVVVKRGTVNVAHFAHKANSTCAGG------ESVVHIATKEWIASLVS-SDNFRITASCYECYDQFTAFRGGSENAGATEVPYDSSEGRYVIDAVALLKSGRVSAAFEVYHTHKTDTVKM 136          
BLAST of mRNA_P-wetherbeei_contig13341.2.1 vs. uniprot
Match: A0A1M5FBY0_9THEO (Competence protein CoiA-like family protein n=1 Tax=Caldanaerobius fijiensis DSM 17918 TaxID=1121256 RepID=A0A1M5FBY0_9THEO)

HSP 1 Score: 55.8 bits (133), Expect = 3.580e-6
Identity = 47/172 (27.33%), Postives = 76/172 (44.19%), Query Frame = 1
Query:    7 VLIPLAFTSSGELKLPNHCHKIDGPFLCRDCGNEVILKKGLIKCAHFAHKAREVHGNGGTSCPSESTIHLAAKEIVFQTF--------SWISTYRKCPSCDEAGPS---TRVVGARAKKEEPLDGFQIDVAIFDASGVVTTVFEVCHTHESTRTKVAHFKDTLVEVDASAIL 489
            +LIP A     +L       K D  + C  CG +VIL+KG I+ AHFAHK         ++C  E+ IH  AK ++ +          ++    R+C  C          ++  A  + + P +G  +DVA+   + VV  V ++   H   + K  + K   +EVD   I+
Sbjct:    1 MLIPYAIDKEYKLYKAEEAKK-DKYYFCPSCGEQVILRKGTIRTAHFAHKP-------DSTCSKETVIHKTAKLLIQEVIQSCEKDKTNFPIILRECKICRNLVKRRLPNQIEKAILEYKLP-EGHIVDVALIANNKVVAAV-KIKVFHSVNKEKEDNLKIPFIEVDGYDIV 162          
BLAST of mRNA_P-wetherbeei_contig13341.2.1 vs. uniprot
Match: A0A083ZVQ2_9GAMM (Competence protein n=1 Tax=Serratia sp. DD3 TaxID=1410619 RepID=A0A083ZVQ2_9GAMM)

HSP 1 Score: 55.5 bits (132), Expect = 3.980e-6
Identity = 30/87 (34.48%), Postives = 43/87 (49.43%), Query Frame = 1
Query:    7 VLIPLAFTSSGELKLPNHCHKIDGPFLCRDCGNEVILKKGLIKCAHFAHKAREVHGNGGTSCPSESTIHLAAKEIVFQTFSWISTYR 267
            +L  +   ++G++   N C K DGPF C  C  E++LKKG+IK  HFAHK       G      E+  H   KE ++     +S  R
Sbjct:    1 MLTGMRSATNGKVFAKN-CEKKDGPFFCIGCQKELVLKKGMIKVHHFAHKPPSSCTRG----QGETEKHRECKESIYNMLLTMSNVR 82          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13341.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A7C3C5A0_9BACT1.250e-1433.33Uncharacterized protein (Fragment) n=1 Tax=Bryobac... [more]
A0A7Y2L5X6_9THEO1.590e-1029.14Uncharacterized protein n=1 Tax=Caldanaerobacter s... [more]
A0A6C0C0J5_9ZZZZ2.410e-1027.78Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6B1EUC1_9BACT1.510e-928.65Uncharacterized protein n=1 Tax=Candidatus Poribac... [more]
A0A7C6RF56_9FIRM3.810e-930.67Uncharacterized protein n=1 Tax=Clostridia bacteri... [more]
A0A6C0K9A6_9ZZZZ2.110e-832.45Uncharacterized protein n=1 Tax=viral metagenome T... [more]
UPI001680E8996.120e-825.90hypothetical protein n=1 Tax=Pseudanabaena sp. FAC... [more]
A0A800E6S0_9BACT1.620e-630.08Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A1M5FBY0_9THEO3.580e-627.33Competence protein CoiA-like family protein n=1 Ta... [more]
A0A083ZVQ2_9GAMM3.980e-634.48Competence protein n=1 Tax=Serratia sp. DD3 TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13341contigP-wetherbeei_contig13341:1117..1605 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1410619.SRDD_39490
Preferred namecoiA
PFAMsCoiA
Model size489
Max annot lvl2|Bacteria
KEGG koko:K06198
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.53e-07
EggNOG OGsCOG4469@1|root,COG4469@2|Bacteria
Cds size489
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185982.0434139-CDS-P-wetherbeei_contig13341:1116..16051683185982.0434139-CDS-P-wetherbeei_contig13341:1116..1605Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13341 1117..1605 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13341.2.1prot_P-wetherbeei_contig13341.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13341 1117..1605 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13341.2.1

>prot_P-wetherbeei_contig13341.2.1 ID=prot_P-wetherbeei_contig13341.2.1|Name=mRNA_P-wetherbeei_contig13341.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=163bp
MVVLIPLAFTSSGELKLPNHCHKIDGPFLCRDCGNEVILKKGLIKCAHFA
HKAREVHGNGGTSCPSESTIHLAAKEIVFQTFSWISTYRKCPSCDEAGPS
TRVVGARAKKEEPLDGFQIDVAIFDASGVVTTVFEVCHTHESTRTKVAHF
KDTLVEVDASAIL
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mRNA from alignment at P-wetherbeei_contig13341:1117..1605+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13341.2.1 ID=mRNA_P-wetherbeei_contig13341.2.1|Name=mRNA_P-wetherbeei_contig13341.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=489bp|location=Sequence derived from alignment at P-wetherbeei_contig13341:1117..1605+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGTGGTTCTCATTCCCCTCGCGTTCACGTCGTCCGGTGAGCTCAAGTT ACCCAATCATTGTCACAAGATTGATGGTCCCTTCTTGTGCAGAGATTGCG GGAACGAGGTCATACTCAAGAAGGGTTTGATAAAATGCGCGCATTTTGCA CACAAAGCCAGAGAAGTACATGGCAACGGTGGCACATCGTGTCCTTCCGA GAGTACGATTCACCTCGCGGCAAAAGAAATTGTGTTCCAAACTTTTTCTT GGATCAGCACGTACAGGAAGTGCCCTTCGTGTGACGAGGCTGGGCCCTCG ACTCGTGTGGTCGGTGCCCGTGCAAAGAAAGAAGAGCCCCTGGACGGCTT TCAAATTGACGTTGCCATATTTGATGCAAGCGGTGTGGTGACGACAGTCT TTGAAGTTTGTCACACGCATGAATCCACGCGCACAAAAGTGGCTCACTTC AAAGATACACTGGTGGAAGTGGATGCGTCTGCGATACTA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13341:1117..1605+

>mRNA_P-wetherbeei_contig13341.2.1 ID=mRNA_P-wetherbeei_contig13341.2.1|Name=mRNA_P-wetherbeei_contig13341.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=489bp|location=Sequence derived from alignment at P-wetherbeei_contig13341:1117..1605+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGTGGTTCTCATTCCCCTCGCGTTCACGTCGTCCGGTGAGCTCAAGTT
ACCCAATCATTGTCACAAGATTGATGGTCCCTTCTTGTGCAGAGATTGCG
GGAACGAGGTCATACTCAAGAAGGGTTTGATAAAATGCGCGCATTTTGCA
CACAAAGCCAGAGAAGTACATGGCAACGGTGGCACATCGTGTCCTTCCGA
GAGTACGATTCACCTCGCGGCAAAAGAAATTGTGTTCCAAACTTTTTCTT
GGATCAGCACGTACAGGAAGTGCCCTTCGTGTGACGAGGCTGGGCCCTCG
ACTCGTGTGGTCGGTGCCCGTGCAAAGAAAGAAGAGCCCCTGGACGGCTT
TCAAATTGACGTTGCCATATTTGATGCAAGCGGTGTGGTGACGACAGTCT
TTGAAGTTTGTCACACGCATGAATCCACGCGCACAAAAGTGGCTCACTTC
AAAGATACACTGGTGGAAGTGGATGCGTCTGCGATACTA
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