mRNA_P-wetherbeei_contig13322.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13322.1.1 vs. uniprot
Match: A0A835YNU8_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNU8_9STRA) HSP 1 Score: 111 bits (278), Expect = 3.100e-26 Identity = 59/107 (55.14%), Postives = 75/107 (70.09%), Query Frame = 1
Query: 31 MFVVLWIWSTQPLQLGVTLVTVAVAFSFVFGQSVRQSVTAC---FVTRAYDVGDRIFFVDDSNVEQNYTVSRINMLTTIFKRFDDMNVCYPNKKLAGKEIKNQRRSG 342
+FV LWI+ L LGVT V++ VAFSF+FG S +C FVTRAYDVGDR++ D+ N E NY V RINMLTT+F+R+DD PN++LA +EI+N RRSG
Sbjct: 919 LFVFLWIFDQNILGLGVTWVSLVVAFSFLFGSSAANFFESCVFIFVTRAYDVGDRVYIKDELNDEANYVVQRINMLTTVFRRWDDHYTILPNQQLAKREIRNMRRSG 1025
BLAST of mRNA_P-wetherbeei_contig13322.1.1 vs. uniprot
Match: A0A835YTT2_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTT2_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 7.860e-19 Identity = 52/116 (44.83%), Postives = 75/116 (64.66%), Query Frame = 1
Query: 4 IACGLAVLLMFVVLWIWSTQPLQLGVTLVTVAVAFSFVFGQSVR---QSVTACFVTRAYDVGDRIFFVDDSNVEQNYTVSRINMLTTIFKRFDDMNVCYPNKKLAGKEIKNQRRSG 342
++ G AV L+FV LWI+ + LGV+ V++ +A SFVF S + +S FVTR +DVGD + F DD + + V RIN+L+T+ KR+D V +PN+ LA +EI+N RRSG
Sbjct: 436 LSVGFAVFLLFVCLWIFGQGVVGLGVSWVSLLLAGSFVFSTSAQGLCESFVFIFVTRPFDVGDGVHFRDDMGQDNVFVVHRINLLSTVLKRWDGQYVVWPNRFLALREIRNMRRSG 551
BLAST of mRNA_P-wetherbeei_contig13322.1.1 vs. uniprot
Match: A0A6H5JSR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR3_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 3.360e-17 Identity = 52/110 (47.27%), Postives = 71/110 (64.55%), Query Frame = 1
Query: 19 AVLLMFVVLWIWSTQPLQLGVTLVTVAVAFSFVFGQSVR---QSVTACFVTRAYDVGDRIFFVDDSNVEQNYTVSRINMLTTIFKRFDDMNVCYPNKKLAGKEIKNQRRS 339
AV++ FV L I L +T +++AVAFSF+FG S +S+ FVT+AYDVGD ++FVDD+ E Y V+RINMLTT+F+R+D N +A K I+NQ RS
Sbjct: 786 AVVVFFVALRILGYDIGSLVLTWLSLAVAFSFLFGSSASAFFESIVFVFVTKAYDVGDPVYFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRS 895
BLAST of mRNA_P-wetherbeei_contig13322.1.1 vs. uniprot
Match: D7FX37_ECTSI (Small Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX37_ECTSI) HSP 1 Score: 73.9 bits (180), Expect = 5.170e-13 Identity = 45/120 (37.50%), Postives = 68/120 (56.67%), Query Frame = 1
Query: 1 VIACGLAVLLMFVVLWIWSTQPLQLGVTLVTVAVAFSFVFGQSVRQSVTAC---FVTRAYDVGDRIFFVDDSNVE----QNYTVSRINMLTTIFKRFDDMNVCYPNKKLAGKEIKNQRRS 339
+I C + +L FV L IW + L VT + +AFSF+ G + ++A FV+R YDVGDR+ SN + N TV +++++TT+FKR+D+ PN LA K I N +R+
Sbjct: 903 IIMCVILFILFFVWLSIWGADVVSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSGSNTQGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRT 1022
BLAST of mRNA_P-wetherbeei_contig13322.1.1 vs. uniprot
Match: A0A2H9TJT1_9FUNG (EF-hand domain-containing protein n=1 Tax=Paramicrosporidium saccamoebae TaxID=1246581 RepID=A0A2H9TJT1_9FUNG) HSP 1 Score: 68.9 bits (167), Expect = 2.810e-11 Identity = 43/109 (39.45%), Postives = 64/109 (58.72%), Query Frame = 1
Query: 28 LMFVVLWIWSTQPL-QLGVTLVTVAVAFSFVFGQSVRQ---SVTACFVTRAYDVGDRIFFVDDSNVEQNYTVSRINMLTTIFKRFDDMNVCYPNKKLAGKEIKNQRRSG 342
L+F V+ T+ L LGV++ VA + +FG+S++ ++ F T YDVGDR++ S Y V +I +L+TIF+R+D VCYPN L+ K I N RR+G
Sbjct: 405 LIFPVVGFSPTEALVPLGVSITPTIVACTLIFGESIKSIFAAIVFLFATHPYDVGDRVYMDQGS-----YFVRKIELLSTIFERWDGFTVCYPNSVLSTKSICNVRRTG 508
BLAST of mRNA_P-wetherbeei_contig13322.1.1 vs. uniprot
Match: A0A0D2U9P5_CAPO3 (EF-hand domain-containing protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2U9P5_CAPO3) HSP 1 Score: 66.6 bits (161), Expect = 1.890e-10 Identity = 44/113 (38.94%), Postives = 65/113 (57.52%), Query Frame = 1
Query: 22 VLLMFVVLWIW----STQPLQLGVTLVTVAVAFSFVFGQSVRQ---SVTACFVTRAYDVGDRIFFVDDSNVEQNYTVSRINMLTTIFKRFDDMNVCYPNKKLAGKEIKNQRRS 339
VLL F++L++W +TL T +AF+FVFG SV++ SV FV +DV DR+FF ++ N V+ I+++ T+F R+D M + YPN L I+N RRS
Sbjct: 782 VLLCFILLFVWLAILGVDVTNFFLTLSTFLLAFTFVFGNSVKELYESVVFLFVNHPFDVQDRVFFNNE-----NCFVTEIHLMNTVFTRWDGMVISYPNAVLNKLPIQNARRS 889
BLAST of mRNA_P-wetherbeei_contig13322.1.1 vs. uniprot
Match: A0A6H5JDS1_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS1_9PHAE) HSP 1 Score: 66.2 bits (160), Expect = 2.590e-10 Identity = 37/99 (37.37%), Postives = 57/99 (57.58%), Query Frame = 1
Query: 1 VIACGLAVLLMFVVLWIWSTQPLQLGVTLVTVAVAFSFVFGQSVRQSVTAC---FVTRAYDVGDRIFFVDDSNVE----QNYTVSRINMLTTIFKRFDD 276
+I C + +L FV L IW + L VT + +AFSF+ G + ++A FV+R YDVGDR+ SN N TV +++++TT+FKR+D+
Sbjct: 951 IIMCVILFILFFVWLSIWGADVVSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSGSNTRGEEPTNVTVVKVDLMTTVFKRWDE 1049
BLAST of mRNA_P-wetherbeei_contig13322.1.1 vs. uniprot
Match: D8LMN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN4_ECTSI) HSP 1 Score: 63.2 bits (152), Expect = 8.530e-10 Identity = 32/59 (54.24%), Postives = 41/59 (69.49%), Query Frame = 1
Query: 163 RAYDVGDRIFFVDDSNVEQNYTVSRINMLTTIFKRFDDMNVCYPNKKLAGKEIKNQRRS 339
RAYDVGD ++FVDD+ E Y V+RINMLTT+F+R+D N +A K I+NQ RS
Sbjct: 11 RAYDVGDPVYFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRS 69
BLAST of mRNA_P-wetherbeei_contig13322.1.1 vs. uniprot
Match: A0A835ZCG5_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCG5_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 1.460e-9 Identity = 34/93 (36.56%), Postives = 53/93 (56.99%), Query Frame = 1
Query: 70 QLGVTLVTVAVAFSFVFGQSVR---QSVTACFVTRAYDVGDRIFFVDDSNVEQNYTVSRINMLTTIFKRFDDMNVCYPNKKLAGKEIKNQRRS 339
Q G T +T+A+AFSF FG +V+ + + FV Y + DR+F DD+ VE N V++IN+L T F R D N + ++++N R+
Sbjct: 60 QAGTTWLTLALAFSFCFGDTVKRLFEGLVLVFVWNPYGISDRVFINDDNKVEMNLVVTKINLLNTEFIRSDGQLCIISNSIIQQRDVRNASRA 152
BLAST of mRNA_P-wetherbeei_contig13322.1.1 vs. uniprot
Match: A0A6H5JBC1_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC1_9PHAE) HSP 1 Score: 63.2 bits (152), Expect = 3.120e-9 Identity = 42/116 (36.21%), Postives = 67/116 (57.76%), Query Frame = 1
Query: 25 LLMFVVLWIWST----QPLQLGVTLVTVAVAFSFVFGQSVRQSVTAC---FVTRAYDVGDRIFFVDD---SNVE-QNYTVSRINMLTTIFKRFDDMNVCYPNKKLAGKEIKNQRRS 339
L++F++ ++W + L L VT + +AFSF+ G + +TA FV+R YDVGDR+ DD + VE N V+++++ TT F+R+D+ PN LA K I N +R+
Sbjct: 940 LILFILAFVWLSILGFDVLSLSVTFASFLIAFSFMIGTAASNLMTAVLFIFVSRLYDVGDRVHIYDDVQTAGVEPMNVVVTKVDLRTTSFRRWDEQIFYIPNHLLAEKTIVNIQRT 1055 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13322.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13322.1.1 >prot_P-wetherbeei_contig13322.1.1 ID=prot_P-wetherbeei_contig13322.1.1|Name=mRNA_P-wetherbeei_contig13322.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=104bp MFVVLWIWSTQPLQLGVTLVTVAVAFSFVFGQSVRQSVTACFVTRAYDVGback to top mRNA from alignment at P-wetherbeei_contig13322:307..1208+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13322.1.1 ID=mRNA_P-wetherbeei_contig13322.1.1|Name=mRNA_P-wetherbeei_contig13322.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=902bp|location=Sequence derived from alignment at P-wetherbeei_contig13322:307..1208+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13322:307..1208+ >mRNA_P-wetherbeei_contig13322.1.1 ID=mRNA_P-wetherbeei_contig13322.1.1|Name=mRNA_P-wetherbeei_contig13322.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=312bp|location=Sequence derived from alignment at P-wetherbeei_contig13322:307..1208+ (Phaeothamnion wetherbeei SAG_119_79)back to top |