mRNA_P-wetherbeei_contig13307.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13307.1.2 vs. uniprot
Match: A0A7S2UWP2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWP2_9STRA) HSP 1 Score: 249 bits (636), Expect = 6.360e-77 Identity = 135/271 (49.82%), Postives = 165/271 (60.89%), Query Frame = 1
Query: 10 PAIAYGIMVYVRPGHDLEAVFRQFNRMFSALYDARNTYVVHVDIKSDKRLQELIEERFKDLPNAFLIESASASWAGITVVERTLALMQAALEADGDGGXXXXXXXXXXKDCGNGDHSXXXXXXXXXGWRYFVNIGHEDYPLVPQAAASARLAAFPDGTNFIKCWNIEGHDFFGQWEHHKTRVHAVYVDDFTGTTHDTRFRRPSMSDPSRSPYKFFKSLQQTVLSRNFVRHAVRSAAARRLLVYMATAQAPDELFFPTLLQLDPKFAA--TC 816
P+IAYGIMVY R G++++ V++QF R+F ALY +N Y +HVDIKSDK L + I K L N I S S SWAGITVVERTLA MQ ALE++ D W+YFVN+GHEDYPL Q S L + GTNFIKCW +EGH+FFGQWEHH+ RV + D FTG HD RR M KF+KSLQQTVLSR F ++ + ARR+L+Y+A ++APDELFFPT LQ + AA TC
Sbjct: 70 PSIAYGIMVYQREGYEVDWVYKQFERLFWALYHPQNFYAIHVDIKSDKELHQRISLLLKGLENVKEIYSVSISWAGITVVERTLAQMQTALESNED-------------------------------WQYFVNLGHEDYPLATQNDMSRLLGEYAPGTNFIKCWPVEGHNFFGQWEHHEKRVEELTFDTFTGEAHDVHIRREHMPTLG---MKFYKSLQQTVLSREFCEYSCYALEARRILLYLANSKAPDELFFPTALQTNADMAAKATC 306
BLAST of mRNA_P-wetherbeei_contig13307.1.2 vs. uniprot
Match: A0A6T5PXW9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5PXW9_HETAK) HSP 1 Score: 241 bits (614), Expect = 1.290e-73 Identity = 137/275 (49.82%), Postives = 162/275 (58.91%), Query Frame = 1
Query: 10 PAIAYGIMVYVRPGHDLEAVFRQFNRMFSALYDARNTYVVHVDIKSDKRLQELIEERFKDLPNAFLIESASASWAGITVVERTLALMQAALEADGDGGXXXXXXXXXXKDCGNGDHSXXXXXXXXXGWRYFVNIGHEDYPLVPQAAASARLAAFPDGT----NFIKCWNIEGHDFFGQWEHHKTRVHAVYVDDFTGTTHDTRFRRPSMSDPSRSPYKFFKSLQQTVLSRNFVRHAVRSAAARRLLVYMATAQAPDELFFPTLLQLDPKFA--ATC 816
P IAYGIMVY R G ++AV RQF R+F ALY NTYV+HVD+KSD L E ++ N + S SWAGITVVERTLALMQ ALE D W YFVNIGHEDYP + Q SA L T NFIKCW+I GHDFFGQWEHH+ RV V +D+F G T DT + RP D R KF+KSLQQT L R+FV +AV +RR+L++MA ++APDE+FFPT+LQ P A ATC
Sbjct: 49 PKIAYGIMVYQRQGRTVDAVLRQFERLFEALYHPENTYVIHVDVKSDPHLIEEMDRYLDFFENTHQLHPVSVSWAGITVVERTLALMQVALEQDPT-------------------------------WGYFVNIGHEDYPAMGQGQMSAWLGRHEVETGGPVNFIKCWDILGHDFFGQWEHHERRVEVVTIDNFVGGTEDTSYTRPR--DDLRG-IKFYKSLQQTTLHRDFVDYAVYGIESRRILLFMANSKAPDEIFFPTVLQTRPDLAETATC 289
BLAST of mRNA_P-wetherbeei_contig13307.1.2 vs. uniprot
Match: A0A4D9D7W1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7W1_9STRA) HSP 1 Score: 228 bits (581), Expect = 5.040e-68 Identity = 139/279 (49.82%), Postives = 163/279 (58.42%), Query Frame = 1
Query: 1 PTTPAIAYGIMVYVRPGHDLEAVFRQFNRMFSALYDARNTYVVHVDIKSDKRLQELIEERFKD-LPNAFLIESASASWAGITVVERTLALMQAALEADGDGGXXXXXXXXXXKDCGNGDHSXXXXXXXXXGWRYFVNIGHEDYPLVPQAAASARLA-AFPDGTNFIKCWNIEGHDFFGQWEHHKTRVHAVYVDDFTGTTHDTR-FRRPSMSDPSRSPYKFFKSLQQTVLSRNFVRHAVRSAAARRLLVYMATAQAPDELFFPTLLQLDPKFA----ATC 816
P+ +AYG+MVY R + VF QF R+F A+Y T VVHVDIKS+ L E I + K P A I S S SW GITVVERTLALMQAALE+D + W YFVNIG EDYPL AA LA A P TNFI CW++ GHDFFGQWEHH+ RV V+VD F G + + R F R S P Y F+KSLQQTVLSR FV AV + +RRLL+Y+AT++APDE+FFPTLL L A ATC
Sbjct: 69 PSPGKVAYGVMVYQRQNKTVSDVFDQFTRLFDAIYSPNFTCVVHVDIKSEPALIEKITDYVKKHAPQASTIPSVSVSWGGITVVERTLALMQAALESDPE-------------------------------WEYFVNIGQEDYPLQSPAAIQEYLAHAVPPATNFIYCWDLRGHDFFGQWEHHEGRVSKVFVDMFDGRSREVRGFPR---SPPKE--YTFYKSLQQTVLSRVFVESAVHAPESRRLLLYLATSEAPDEIFFPTLLHLPSNRAHAARATC 311
BLAST of mRNA_P-wetherbeei_contig13307.1.2 vs. uniprot
Match: A0A835YXC2_9STRA (Core-2/I-branching enzyme-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXC2_9STRA) HSP 1 Score: 221 bits (562), Expect = 6.010e-66 Identity = 123/266 (46.24%), Postives = 151/266 (56.77%), Query Frame = 1
Query: 16 IAYGIMVYVRPGHDLEAVFRQFNRMFSALYDARNTYVVHVDIKSDKRLQELIEERFKDLPNAFLIESASASWAGITVVERTLALMQAALEADGDGGXXXXXXXXXXKDCGNGDHSXXXXXXXXXGWRYFVNIGHEDYPLVPQAAASARLAAFPDGTNFIKCWNIEGHDFFGQWEHHKTRVHAVYVDDFTGTTHDTRFRRPSMSDPSRSPYKFFKSLQQTVLSRNFVRHAVRSAAARRLLVYMATAQAPDELFFPTLLQLDPKFAAT 813
+A+GIMVY R G E+ QF R+ LYD NTY +HVD KSD L I + LPNA ++ES S +W GI+VVERTLAL QAALE D W YFVNIGHEDYP L A P G N++KCW++ HDFFGQ E H + V VDDF G H T F +P+ S + ++F+KSLQQ V+SR+F RHAV SA ARRLL+ A+ APDE+FFPTLLQ + +T
Sbjct: 38 VAFGIMVYQRQGVSAESALMQFQRLLRTLYDPVNTYAIHVDSKSDPTLIAGINRILQRLPNAVMLESTSVAWGGISVVERTLALAQAALELD-------------------------------QRWSYFVNIGHEDYPNASPREIRKALTAMPAGRNYMKCWHLAEHDFFGQIERHGPKARKVVVDDFAGMVHPTGFSKPADSMRALG-FQFYKSLQQMVISRDFCRHAVYSADARRLLLVTASLLAPDEVFFPTLLQQSDSYRST 271
BLAST of mRNA_P-wetherbeei_contig13307.1.2 vs. uniprot
Match: D8LSR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSR7_ECTSI) HSP 1 Score: 188 bits (477), Expect = 2.220e-53 Identity = 113/273 (41.39%), Postives = 134/273 (49.08%), Query Frame = 1
Query: 10 PAIAYGIMVYVRPGHDLEAVFRQFNRMFSALYDARNTYVVHVDIKSDKRLQELIEERFKDLPNAFLIESASASWAGITVVERTLALMQAALEADGDGGXXXXXXXXXXKDCGNGDHSXXXXXXXXXGWRYFVNIGHEDYPLVPQAAASARLAAFPDGTNFIKCWNIEGHDFFGQWEHHKTRVHAVYVDDFTGTTHDTRFRRPSMSDPSR--SPYKFFKSLQQTVLSRNFVRHAVRSAAARRLLVYMATAQAPDELFFPTLLQLDPKFA--ATC 816
P +AYGIMVY R G+ + QF RM ALYD NTYV+HVDIKSDK L + I KDLPN + EDYP QA L DGTNFIKCW IEGHDFFGQ E H+ RV V VDDF G + R + R + YKFFKSLQQT+LSR +A+ S+ ARRLL+YMAT++APDEL+FPTL QLD +++ ATC
Sbjct: 64 PRLAYGIMVYQRKGYSPQTTLDQFGRMLKALYDEENTYVIHVDIKSDKALLDAISHHIKDLPNVY----------------------------------------------------------------------EEDYPSASQAEMRRWLKDQKDGTNFIKCWPIEGHDFFGQMERHEQRVQDVNVDDFMGGVKEYRTMSGNTGSQERPKTDYKFFKSLQQTMLSRQLTEYAIHSSEARRLLLYMATSKAPDELYFPTLTQLDERYSSMATC 266
BLAST of mRNA_P-wetherbeei_contig13307.1.2 vs. uniprot
Match: W7UCA6_9STRA (Core-2 i-branching enzyme n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UCA6_9STRA) HSP 1 Score: 169 bits (429), Expect = 7.580e-47 Identity = 97/203 (47.78%), Postives = 113/203 (55.67%), Query Frame = 1
Query: 1 PTTPAIAYGIMVYVRPGHDLEAVFRQFNRMFSALYDARNTYVVHVDIKSDKRLQELIEERFKD-LPNAFLIESASASWAGITVVERTLALMQAALEADGDGGXXXXXXXXXXKDCGNGDHSXXXXXXXXXGWRYFVNIGHEDYPLVPQAAASARLA-AFPDGTNFIKCWNIEGHDFFGQWEHHKTRVHAVYVDDFTGTTHDTR 603
P+ +AYG+MVY R + VF QF R+F A+Y T VVHVDIKS+ L E I + K P A I S S SW GITVVERTLALMQAALE+D + W YFVNIG EDYPL AA LA A P TNFI CW++ GHDFFGQWEHH+ RV V+VD F G + + R
Sbjct: 69 PSPGKVAYGVMVYQRQNKTVSDVFDQFTRLFDAIYSPNFTCVVHVDIKSEPALIEKITDYVKKHAPQASTIPSVSVSWGGITVVERTLALMQAALESDPE-------------------------------WEYFVNIGQEDYPLQSPAAIQEYLAHAVPPATNFIYCWDLRGHDFFGQWEHHEGRVSKVFVDMFDGRSREVR 240
BLAST of mRNA_P-wetherbeei_contig13307.1.2 vs. uniprot
Match: A0A7S1U3N2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3N2_9STRA) HSP 1 Score: 142 bits (359), Expect = 1.170e-38 Identity = 84/205 (40.98%), Postives = 103/205 (50.24%), Query Frame = 1
Query: 58 LEAVFRQFNRMFSALYDARNTYVVHVDIKSDKRLQELIEERFKDLPNAFLIESASASWAGITVVERTLALMQAALEADGDGGXXXXXXXXXXKDCGNGDHSXXXXXXXXXGWRYFVNIGHEDYPLVPQAAASARLAAFPDGTNFIKCWNIEGHDFFGQWEHHKTRVHAVYVDDFTGTTHD-TRFRRPSMSDPSRSPYKFFKSLQQ 669
L V QF+R FSA+ + Y +HVD KS + + N ++ES S SWAG+TVVERTLAL Q LEA G W +FVN+GHEDYP+V A L A P TNFIKCW I H+FFGQ E H RV ++VDDF G HD T RP + +KF+K+LQQ
Sbjct: 12 LSDVELQFHRSFSAVLSDDHFYALHVDRKSSSAFLAAVRRNYSAAANVEILESVSVSWAGVTVVERTLALAQTCLEAFGH-------------------------------WDFFVNLGHEDYPVVGMEEMQAWLGAHPRETNFIKCWPIGRHNFFGQVESHGHRVRQIHVDDFAGDVHDITDVERPKFKE-----FKFYKALQQ 180
BLAST of mRNA_P-wetherbeei_contig13307.1.2 vs. uniprot
Match: A0A6H5JPB4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB4_9PHAE) HSP 1 Score: 144 bits (363), Expect = 1.030e-37 Identity = 76/143 (53.15%), Postives = 93/143 (65.03%), Query Frame = 1
Query: 400 FVNIGHEDYPLVPQAAASARLAAFPDGTNFIKCWNIEGHDFFGQWEHHKTRVHAVYVDDFTGTTHDTRF--RRPSMSDPSRSPYKFFKSLQQTVLSRNFVRHAVRSAAARRLLVYMATAQAPDELFFPTLLQLDPKFA--ATC 816
F EDYP QA L DGTNFIKCW IEGHDFFGQ E H+ RV V VDDF G + R + + ++ YKFFKSLQQT+LSR +A+ S+ ARRLL+YMAT++APDEL+FPTL QLD +++ ATC
Sbjct: 9 FCRCRQEDYPSASQAEMRRWLKDQKDGTNFIKCWPIEGHDFFGQMERHEQRVQDVNVDDFMGGVKEYRTVSGKTGSQERPKTDYKFFKSLQQTMLSRQLTEYAIHSSEARRLLLYMATSKAPDELYFPTLTQLDERYSSMATC 151
BLAST of mRNA_P-wetherbeei_contig13307.1.2 vs. uniprot
Match: A0A1L3ZQA3_RHILE (Glycosyl transferase n=1 Tax=Rhizobium leguminosarum TaxID=384 RepID=A0A1L3ZQA3_RHILE) HSP 1 Score: 74.3 bits (181), Expect = 8.150e-12 Identity = 49/154 (31.82%), Postives = 70/154 (45.45%), Query Frame = 1
Query: 16 IAYGIMVYVRPGHDLEAVFRQFNRMFSALYDARNTYVVHVDIKSDKRLQELIEERFKDLPNAFLIESASASWAGITVVERTLALMQAALEADGDGGXXXXXXXXXXKDCGNGDHSXXXXXXXXXGWRYFVNIGHEDYPLVPQAAASARLAAFPD 477
I Y I+V+ P QF R+F A+YD RN+YVVHVD S + L I + + PNA ++E +A W G ++V+ L MQ L DG+ W +F+N+ +D+PL QA A L A P+
Sbjct: 2 IGYLILVHRFP--------EQFKRLFKAIYDPRNSYVVHVDKNSGETLDADIRDFLQPYPNAEVMEGHAAVWGGYSLVDAELRGMQHLLTMDGN-------------------------------WSHFINLSGQDFPLKTQAQIMAHLRAHPN 116
BLAST of mRNA_P-wetherbeei_contig13307.1.2 vs. uniprot
Match: A0A0D0L3H0_RHIRD (Glycosyl transferase n=3 Tax=Rhizobium/Agrobacterium group TaxID=227290 RepID=A0A0D0L3H0_RHIRD) HSP 1 Score: 70.9 bits (172), Expect = 1.360e-10 Identity = 50/165 (30.30%), Postives = 74/165 (44.85%), Query Frame = 1
Query: 16 IAYGIMVYVRPGHDLEAVFRQFNRMFSALYDARNTYVVHVDIKSDKRLQELIEERFKDLPNAFLIESASASWAGITVVERTLALMQAALEADGDGGXXXXXXXXXXKDCGNGDHSXXXXXXXXXGWRYFVNIGHEDYPLVPQAAASARLAAFPDGTNFIKCWNIE 510
I Y I+V+ P +QF R+F A+YD RN+YVVHVD S + L I K NA ++E +A W G ++V+ L M+ L +G+ W +F+N+ +D+PL QA A L P G +IK ++ E
Sbjct: 2 IGYLILVHRFP--------KQFKRLFKAIYDPRNSYVVHVDKNSGEALNADISNFLKPYSNAEVMEGHAALWGGYSLVDAELRGMEHLLAMNGE-------------------------------WSHFINLSGQDFPLKTQAQIMAYLMDHP-GREYIKAFDQE 126 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13307.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13307.1.2 >prot_P-wetherbeei_contig13307.1.2 ID=prot_P-wetherbeei_contig13307.1.2|Name=mRNA_P-wetherbeei_contig13307.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=262bp MVYVRPGHDLEAVFRQFNRMFSALYDARNTYVVHVDIKSDKRLQELIEERback to top mRNA from alignment at P-wetherbeei_contig13307:255..1659+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13307.1.2 ID=mRNA_P-wetherbeei_contig13307.1.2|Name=mRNA_P-wetherbeei_contig13307.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1405bp|location=Sequence derived from alignment at P-wetherbeei_contig13307:255..1659+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13307:255..1659+ >mRNA_P-wetherbeei_contig13307.1.2 ID=mRNA_P-wetherbeei_contig13307.1.2|Name=mRNA_P-wetherbeei_contig13307.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=786bp|location=Sequence derived from alignment at P-wetherbeei_contig13307:255..1659+ (Phaeothamnion wetherbeei SAG_119_79)back to top |