mRNA_P-wetherbeei_contig13304.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13304.1.1
Unique NamemRNA_P-wetherbeei_contig13304.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13304.1.1 vs. uniprot
Match: A0A7C4XKY1_9HYPH (FAD-binding oxidoreductase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XKY1_9HYPH)

HSP 1 Score: 404 bits (1037), Expect = 4.710e-137
Identity = 205/269 (76.21%), Postives = 232/269 (86.25%), Query Frame = 1
Query:    1 MTADGSRPPLNAPTPDLIRRLSEIVGREHALVDPDQQLPFLREMRDLYIGKSPLVLRPADTDQVARCMALCNEARVAVVPQAGNTGLVGGQVPWERGDEIVLSIARLNKVRHVDAAGYNMTVEAGLTLAECQGEADKAGRYFPLSLPSEGSCRIGGNMGTNAGGVAVLAYGNTRQLIMGVEVVLADGRIVPGLKALKKDNTGYDLRDLFIGSEGTLGIITAAVLKLFPRPAEKATAFIALPKLESALDLFTLAQNTSLTNLTAFEFLSR 807
            MTA  +R  L APTP+LI R SEIVG EHAL DPDQQLPFLREMRDLY G+SPLVLRP   +QV R M L NEARVA+VPQAGNTGLVG Q+P+E G E+VLS ARL+K+R +DAAG +MTVEAG+TLAECQ  A++AGR FPLSLPSEGSCRIGGN+ TNAGGVAVLAYGNTRQL++G+EVVLADGR+  GLKALKKDNTGYDLRDLFIGSEGTLGIITAAVLKLFPRPAEKATAF+ALP +E+ L LFT A   + TNLTA+EF++R
Sbjct:    1 MTAPPARSRLLAPTPELIARFSEIVGAEHALTDPDQQLPFLREMRDLYYGRSPLVLRPGTVEQVQRIMGLANEARVAIVPQAGNTGLVGAQIPYESGTEVVLSTARLSKLRGIDAAGLSMTVEAGMTLAECQAAAERAGRLFPLSLPSEGSCRIGGNIATNAGGVAVLAYGNTRQLVLGLEVVLADGRLWNGLKALKKDNTGYDLRDLFIGSEGTLGIITAAVLKLFPRPAEKATAFVALPSIEATLHLFTRALTAAGTNLTAYEFMAR 269          
BLAST of mRNA_P-wetherbeei_contig13304.1.1 vs. uniprot
Match: A0A2W4MXK4_9PROT (Hydroxyacid dehydrogenase (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4MXK4_9PROT)

HSP 1 Score: 392 bits (1008), Expect = 5.960e-136
Identity = 192/251 (76.49%), Postives = 226/251 (90.04%), Query Frame = 1
Query:   19 RPPLNAPTPDLIRRLSEIVGREHALVDPDQQLPFLREMRDLYIGKSPLVLRPADTDQVARCMALCNEARVAVVPQAGNTGLVGGQVPWERGDEIVLSIARLNKVRHVDAAGYNMTVEAGLTLAECQGEADKAGRYFPLSLPSEGSCRIGGNMGTNAGGVAVLAYGNTRQLIMGVEVVLADGRIVPGLKALKKDNTGYDLRDLFIGSEGTLGIITAAVLKLFPRPAEKATAFIALPKLESALDLFTLAQNTS 771
            RPPL APTP+LI RL+EIVG EHAL DPDQQLP+LRE RDLYIG++PLVLRPA+T+QV+R +ALCNEARV VVPQAGNTGLVGGQVP+E G+EIVLS++RL ++R ++ A Y+MTVEAGLTLAEC+  A++A R FPLSLPSEG+C+IGGN+ TNAGGV VLAYGN RQL++G+EVVLADGRIVPGLKALKKDNTGYDL+DLFIGSEGTLG+ITAAVLKLFPRPAE ATA +AL ++  ALDLF+LAQ T+
Sbjct:    6 RPPLAAPTPELIARLTEIVGPEHALTDPDQQLPYLREWRDLYIGRTPLVLRPANTEQVSRILALCNEARVGVVPQAGNTGLVGGQVPFESGNEIVLSVSRLKQIREINPAAYSMTVEAGLTLAECRAAAERADRLFPLSLPSEGTCQIGGNLATNAGGVGVLAYGNARQLVLGLEVVLADGRIVPGLKALKKDNTGYDLKDLFIGSEGTLGVITAAVLKLFPRPAESATAMVALAEISHALDLFSLAQETA 256          
BLAST of mRNA_P-wetherbeei_contig13304.1.1 vs. uniprot
Match: A0A2W4RL02_9PROT (Hydroxyacid dehydrogenase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4RL02_9PROT)

HSP 1 Score: 388 bits (996), Expect = 7.430e-131
Identity = 191/267 (71.54%), Postives = 229/267 (85.77%), Query Frame = 1
Query:    7 ADGSRPPLNAPTPDLIRRLSEIVGREHALVDPDQQLPFLREMRDLYIGKSPLVLRPADTDQVARCMALCNEARVAVVPQAGNTGLVGGQVPWERGDEIVLSIARLNKVRHVDAAGYNMTVEAGLTLAECQGEADKAGRYFPLSLPSEGSCRIGGNMGTNAGGVAVLAYGNTRQLIMGVEVVLADGRIVPGLKALKKDNTGYDLRDLFIGSEGTLGIITAAVLKLFPRPAEKATAFIALPKLESALDLFTLAQNTSLTNLTAFEFLSR 807
            A  SR PL APTP+LI R  EIVG EH L DPDQQLP+LRE RDL+IG++P+VLRP  T++V+R +ALCNEARV VVPQAGNTGLVGGQ+P+E G+EIV+S++RL ++R ++ A Y MTVEAGLTLAEC+  A++  R FPLSLPSEGSC+IGGN+ TNAGGV VLAYGN RQL++G+EVVLADGRIVPGLKALKKDNTGYDL+DLFIGSEGTLGIITAAVL+LFPRPAE ATA +AL ++  ALDLF+LAQ T+  ++TAFEF+ R
Sbjct:    2 AQQSRSPLAAPTPELIDRFREIVGAEHTLTDPDQQLPYLREWRDLFIGRAPVVLRPGSTEEVSRILALCNEARVGVVPQAGNTGLVGGQIPFETGNEIVVSVSRLKRIREINPAAYVMTVEAGLTLAECRAAAERVDRLFPLSLPSEGSCQIGGNLATNAGGVGVLAYGNARQLVLGLEVVLADGRIVPGLKALKKDNTGYDLKDLFIGSEGTLGIITAAVLRLFPRPAETATAMVALAEISHALDLFSLAQETAGRSVTAFEFIPR 268          
BLAST of mRNA_P-wetherbeei_contig13304.1.1 vs. uniprot
Match: A0A1E4CV71_9HYPH (Hydroxyacid dehydrogenase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1E4CV71_9HYPH)

HSP 1 Score: 355 bits (912), Expect = 3.590e-118
Identity = 177/256 (69.14%), Postives = 214/256 (83.59%), Query Frame = 1
Query:   40 TPDLIRRLSEIVGREHALVDPDQQLPFLREMRDLYIGKSPLVLRPADTDQVARCMALCNEARVAVVPQAGNTGLVGGQVPWERGDEIVLSIARLNKVRHVDAAGYNMTVEAGLTLAECQGEADKAGRYFPLSLPSEGSCRIGGNMGTNAGGVAVLAYGNTRQLIMGVEVVLADGRIVPGLKALKKDNTGYDLRDLFIGSEGTLGIITAAVLKLFPRPAEKATAFIALPKLESALDLFTLAQNTSLTNLTAFEFLSR 807
            +P+++ R + IVG+ HALVDPDQQLP+L+E+RD Y+G+S LVLRP  T++V+R MAL NE  +AVVPQAGNTGLVGGQ+P     EIV+S+AR+NKVRHVD  G +MTVEAGLTL ECQ  A+KAGR FPL+LPS+GSCRIGGN+GTNAGGV VLAYGN RQ ++G+EVVLADGR+  GL+ALKKDNTGYDLRDLFIGSEGTLGIITAAVL+L PRPAE ATA + LP +E+AL L + AQ  + + LTAFEF+ R
Sbjct:   13 SPEIVERFAAIVGKAHALVDPDQQLPYLKELRDKYVGRSALVLRPGSTEEVSRIMALANELNLAVVPQAGNTGLVGGQIPQH--GEIVVSVARMNKVRHVDPVGTSMTVEAGLTLQECQDVAEKAGRLFPLALPSQGSCRIGGNLGTNAGGVGVLAYGNARQQVLGLEVVLADGRVWNGLRALKKDNTGYDLRDLFIGSEGTLGIITAAVLRLLPRPAEMATAMVTLPSIENALTLLSEAQARAGSTLTAFEFIPR 266          
BLAST of mRNA_P-wetherbeei_contig13304.1.1 vs. uniprot
Match: A0A7C2LT28_9HYPH (FAD-binding oxidoreductase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2LT28_9HYPH)

HSP 1 Score: 347 bits (891), Expect = 5.050e-115
Identity = 180/255 (70.59%), Postives = 209/255 (81.96%), Query Frame = 1
Query:   40 TPDLIRRLSEIVGREHALVDPDQQLPFLREMRDLYIGKSPLVLRPADTDQVARCMALCNEARVAVVPQAGNTGLVGGQVPWERGDEIVLSIARLNKVRHVDAAGYNMTVEAGLTLAECQGEADKAGRYFPLSLPSEGSCRIGGNMGTNAGGVAVLAYGNTRQLIMGVEVVLADGRIVPGLKALKKDNTGYDLRDLFIGSEGTLGIITAAVLKLFPRPAEKATAFIALPKLESALDLFTLAQNTSLTNLTAFEFLS 804
            T DLI RL+ IVG EHAL DP++QLP+LRE RD+Y G++ LVLRP  T++V+R MAL  E  + VVPQAGNTGLVGGQ P +   E++LS+ RL++VR VDA  Y MTVEAGLTLAE Q  AD+AGR FPLSLPSEGSCRIGGN+ TNAGGV+VLAYGN RQL +G+EVVLADGR+  GLK LKKDNTGYDL+DLFIGSEGTLGIITAAVLKLFPRP EKATAF ALP + SAL LF+LAQ  +  +LTAFE +S
Sbjct:   11 TADLIARLAAIVGPEHALADPERQLPYLREWRDMYRGRAALVLRPGTTEEVSRIMALAGEHAIPVVPQAGNTGLVGGQTPMQ--GELLLSVERLDRVRAVDAQAYTMTVEAGLTLAEAQAVADRAGRLFPLSLPSEGSCRIGGNLATNAGGVSVLAYGNARQLTLGLEVVLADGRVWNGLKGLKKDNTGYDLKDLFIGSEGTLGIITAAVLKLFPRPVEKATAFAALPDIASALPLFSLAQEVAGHSLTAFEVMS 263          
BLAST of mRNA_P-wetherbeei_contig13304.1.1 vs. uniprot
Match: A0A6N6SUQ3_9HYPH (FAD-binding oxidoreductase n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6SUQ3_9HYPH)

HSP 1 Score: 346 bits (887), Expect = 2.030e-114
Identity = 176/256 (68.75%), Postives = 210/256 (82.03%), Query Frame = 1
Query:   40 TPDLIRRLSEIVGREHALVDPDQQLPFLREMRDLYIGKSPLVLRPADTDQVARCMALCNEARVAVVPQAGNTGLVGGQVPWERGDEIVLSIARLNKVRHVDAAGYNMTVEAGLTLAECQGEADKAGRYFPLSLPSEGSCRIGGNMGTNAGGVAVLAYGNTRQLIMGVEVVLADGRIVPGLKALKKDNTGYDLRDLFIGSEGTLGIITAAVLKLFPRPAEKATAFIALPKLESALDLFTLAQNTSLTNLTAFEFLSR 807
            TP LI RL  IVG  HAL DPDQQLP+LRE RD+Y G++ +VLRP   ++V++ +AL +   + VVPQAGNTGLVGGQ+P     EI+LS+ RL +VR+VDA GY MTVE+GLTLAE Q  A+ A R+FPLSLPSEG+C+IGGN+GTNAGGV VLAYGN RQL++G+EVVLADGRI  GL ALKKDNTGYDL+DLFIGSEGTLGIITAAVLKLFPRP EKATA +ALP + +AL LF+LAQ T+ T+LTAFEF+ R
Sbjct:   11 TPALIERLRAIVGPAHALTDPDQQLPYLREWRDMYEGRAGVVLRPGSAEEVSKILALAHAHAIPVVPQAGNTGLVGGQMPMN--GEILLSVGRLKRVRNVDAIGYTMTVESGLTLAEAQAAAEAANRFFPLSLPSEGTCQIGGNLGTNAGGVGVLAYGNARQLVLGLEVVLADGRIWNGLNALKKDNTGYDLKDLFIGSEGTLGIITAAVLKLFPRPVEKATALLALPDIGAALSLFSLAQETAGTSLTAFEFMPR 264          
BLAST of mRNA_P-wetherbeei_contig13304.1.1 vs. uniprot
Match: A0A2S5PCZ7_HYPSQ (Hydroxyacid dehydrogenase n=2 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5PCZ7_HYPSQ)

HSP 1 Score: 342 bits (877), Expect = 7.220e-113
Identity = 171/260 (65.77%), Postives = 207/260 (79.62%), Query Frame = 1
Query:   25 PLNAPTPDLIRRLSEIVGREHALVDPDQQLPFLREMRDLYIGKSPLVLRPADTDQVARCMALCNEARVAVVPQAGNTGLVGGQVPWERGDEIVLSIARLNKVRHVDAAGYNMTVEAGLTLAECQGEADKAGRYFPLSLPSEGSCRIGGNMGTNAGGVAVLAYGNTRQLIMGVEVVLADGRIVPGLKALKKDNTGYDLRDLFIGSEGTLGIITAAVLKLFPRPAEKATAFIALPKLESALDLFTLAQNTSLTNLTAFEFLS 804
            PLN PTP+LIRRL+EI G  HAL +PD Q P+L E RD Y+G+SPL+LRP   D+V++ +ALC+ ARV VVPQAGNTGLVGGQ+P+E G EIV+S+ RL ++R  DAAG +M  EAG+TLA+   EA+  GR FPLS+ SEGSCRIGGN+ TNAGG AVLAYGN RQL+ G+EVVLADGR+  GL+ LKKDNTGYDL+ LFIGSEGTLGIITAA LKL PRPAE ATA  A+P +E+  +LF LA+  +  +LTAFEFLS
Sbjct:    7 PLNPPTPELIRRLAEITGPAHALTNPDLQRPYLIEWRDKYVGRSPLILRPGKVDEVSKILALCHSARVGVVPQAGNTGLVGGQIPFEHGHEIVISVERLTRIRRTDAAGGSMVAEAGVTLADVHTEAEGIGRLFPLSMGSEGSCRIGGNLATNAGGTAVLAYGNARQLVYGLEVVLADGRVWDGLRTLKKDNTGYDLKQLFIGSEGTLGIITAAALKLAPRPAETATALSAVPTIEAVGELFRLAEARARQSLTAFEFLS 266          
BLAST of mRNA_P-wetherbeei_contig13304.1.1 vs. uniprot
Match: A0A537NTV2_9PROT (FAD-binding oxidoreductase (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NTV2_9PROT)

HSP 1 Score: 316 bits (809), Expect = 2.040e-105
Identity = 151/257 (58.75%), Postives = 205/257 (79.77%), Query Frame = 1
Query:   37 PTPDLIRRLSEIVGREHALVDPDQQLPFLREMRDLYIGKSPLVLRPADTDQVARCMALCNEARVAVVPQAGNTGLVGGQVPWERGDEIVLSIARLNKVRHVDAAGYNMTVEAGLTLAECQGEADKAGRYFPLSLPSEGSCRIGGNMGTNAGGVAVLAYGNTRQLIMGVEVVLADGRIVPGLKALKKDNTGYDLRDLFIGSEGTLGIITAAVLKLFPRPAEKATAFIALPKLESALDLFTLAQNTSLTNLTAFEFLSR 807
            P+   + RL+ +VG ++A+ DP Q   ++ E R+++IGKSPLVLRPA TD+V++ +A+ +E   A+VPQ+GNTGLVGGQ+P+E GDE+VLS+ R+ ++R+VD    ++TV+AG+TL   Q EA+KA R FPLSL SEGSCRIGGN+ TNAGG+ VLAYGN+R L +G+EVVLADGRI  GLK+L+KDNTGYDL++LFIG+EGTLG+IT  V+KLFPRP+ +ATAF+ALP +++ALDL TLA+  S + +TA E   R
Sbjct:    5 PSAQTLARLAAVVGDKYAITDPTQMTAYMTEWREIWIGKSPLVLRPAATDEVSKILAIAHEMETAIVPQSGNTGLVGGQIPYETGDEVVLSLNRMTRIRNVDPVNNSITVDAGVTLKSVQDEAEKADRLFPLSLESEGSCRIGGNLSTNAGGLGVLAYGNSRDLCLGLEVVLADGRIWNGLKSLRKDNTGYDLKNLFIGAEGTLGVITGVVMKLFPRPSNRATAFVALPSIKAALDLLTLARQRSSSPVTAIELFPR 261          
BLAST of mRNA_P-wetherbeei_contig13304.1.1 vs. uniprot
Match: A0A431NTP7_9HYPH (FAD-binding oxidoreductase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A431NTP7_9HYPH)

HSP 1 Score: 322 bits (826), Expect = 3.020e-105
Identity = 162/256 (63.28%), Postives = 202/256 (78.91%), Query Frame = 1
Query:   40 TPDLIRRLSEIVGREHALVDPDQQLPFLREMRDLYIGKSPLVLRPADTDQVARCMALCNEARVAVVPQAGNTGLVGGQVPWERGDEIVLSIARLNKVRHVDAAGYNMTVEAGLTLAECQGEADKAGRYFPLSLPSEGSCRIGGNMGTNAGGVAVLAYGNTRQLIMGVEVVLADGRIVPGLKALKKDNTGYDLRDLFIGSEGTLGIITAAVLKLFPRPAEKATAFIALPKLESALDLFTLAQNTSLTNLTAFEFLSR 807
            TPDLI   ++IVG  HAL+DPD QLP+LREMRD + G+S LVLRPA TD+V+R MAL +  ++AVVPQ+GNTGLVGGQVP +   EI+LS++R+  VR +D  G+ MTVEAGLTL   Q  A    R+FPL+LPS+GSC+IGGN+ TNAGGV VLAYGN R  ++G+EVVLADGRI  GL ALKKDNTGY L+DLF+G+EGTLGIITAAVL++FPRPAE  TA +A+P +E+A  LF  AQ+ + + LTAFEF+ R
Sbjct:    8 TPDLIAAFTDIVGASHALLDPDAQLPYLREMRDQWKGRSALVLRPASTDEVSRIMALAHRHKIAVVPQSGNTGLVGGQVPMQ--GEILLSLSRMKAVRALDPVGFTMTVEAGLTLEAAQAAAQSVDRFFPLTLPSQGSCQIGGNLSTNAGGVGVLAYGNARAFVLGLEVVLADGRIWNGLTALKKDNTGYALKDLFVGAEGTLGIITAAVLRIFPRPAETVTALVAIPSIEAARTLFVAAQDRAGSALTAFEFMPR 261          
BLAST of mRNA_P-wetherbeei_contig13304.1.1 vs. uniprot
Match: A0A101VKX4_9PROT (Hydroxyacid dehydrogenase n=1 Tax=Alphaproteobacteria bacterium BRH_c36 TaxID=1734406 RepID=A0A101VKX4_9PROT)

HSP 1 Score: 320 bits (819), Expect = 3.650e-104
Identity = 166/259 (64.09%), Postives = 201/259 (77.61%), Query Frame = 1
Query:   28 LNAPTPDLIRRLSEIVGREHALVDPDQQLPFLREMRDLYIGKSPLVLRPADTDQVARCMALCNEARVAVVPQAGNTGLVGGQVPWERGDEIVLSIARLNKVRHVDAAGYNMTVEAGLTLAECQGEADKAGRYFPLSLPSEGSCRIGGNMGTNAGGVAVLAYGNTRQLIMGVEVVLADGRIVPGLKALKKDNTGYDLRDLFIGSEGTLGIITAAVLKLFPRPAEKATAFIALPKLESALDLFTLAQNTSLTNLTAFEFLS 804
            LN PT  LI  LS IVG  +A+ DP  Q P+L E RD Y GK+ LVLRP    +V++ +   N+ARV +VPQ GNTGLVGGQ+P+E G EIV+S+ RLN+VRHVDAAG +M VEAG+TL++ Q  AD+AG  FPLSL SEGSCRIGGN+ +NAGGV VLAYGN R L +G+EVVLADGRI  GL+ALKKDNTGYDL+ LF+GSEGTLGIITAAVLKLF +PAE ATA +A+  L++ L LF  A+  + T+LTAFEFLS
Sbjct:    4 LNHPTAALIDTLSAIVGERYAVRDPQAQAPYLSEWRDKYFGKTSLVLRPGTAREVSQIIKSANDARVGIVPQGGNTGLVGGQIPFESGHEIVVSLERLNRVRHVDAAGGSMVVEAGVTLSDVQKAADEAGALFPLSLGSEGSCRIGGNLASNAGGVQVLAYGNARDLTLGLEVVLADGRIWDGLRALKKDNTGYDLKQLFVGSEGTLGIITAAVLKLFAKPAEHATALVAVGDLDATLALFERAREVAGTSLTAFEFLS 262          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13304.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4XKY1_9HYPH4.710e-13776.21FAD-binding oxidoreductase n=1 Tax=Hyphomicrobiale... [more]
A0A2W4MXK4_9PROT5.960e-13676.49Hydroxyacid dehydrogenase (Fragment) n=1 Tax=Prote... [more]
A0A2W4RL02_9PROT7.430e-13171.54Hydroxyacid dehydrogenase n=1 Tax=Proteobacteria b... [more]
A0A1E4CV71_9HYPH3.590e-11869.14Hydroxyacid dehydrogenase n=3 Tax=Alphaproteobacte... [more]
A0A7C2LT28_9HYPH5.050e-11570.59FAD-binding oxidoreductase n=1 Tax=Hyphomicrobiale... [more]
A0A6N6SUQ3_9HYPH2.030e-11468.75FAD-binding oxidoreductase n=1 Tax=Hyphomicrobiace... [more]
A0A2S5PCZ7_HYPSQ7.220e-11365.77Hydroxyacid dehydrogenase n=2 Tax=Hyphomicrobium s... [more]
A0A537NTV2_9PROT2.040e-10558.75FAD-binding oxidoreductase (Fragment) n=1 Tax=Alph... [more]
A0A431NTP7_9HYPH3.020e-10563.28FAD-binding oxidoreductase n=1 Tax=Hyphomicrobiale... [more]
A0A101VKX4_9PROT3.650e-10464.09Hydroxyacid dehydrogenase n=1 Tax=Alphaproteobacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13304contigP-wetherbeei_contig13304:1040..1846 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1267005.KB911256_gene1650
Preferred nameMA20_42035
PFAMsFAD-oxidase_C,FAD_binding_4
Model size807
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00044
KEGG koko:K00102
KEGG ReactionR00197
KEGG Pathwayko00620,map00620
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0003674,GO:0003824,GO:0004457,GO:0004458,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006089,GO:0006091,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016053,GO:0016491,GO:0016614,GO:0016898,GO:0019249,GO:0019516,GO:0019752,GO:0022900,GO:0022904,GO:0030447,GO:0032787,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046394,GO:0048037,GO:0050660,GO:0050662,GO:0051990,GO:0055114,GO:0071704,GO:0071949,GO:0072330,GO:0097159,GO:0099615,GO:1901265,GO:1901363,GO:1901576,GO:1901615,GO:1901617
Exons1
Evalue4.61e-103
EggNOG OGsCOG0277@1|root,COG0277@2|Bacteria,1MU6Y@1224|Proteobacteria,2TRYI@28211|Alphaproteobacteria,3N6DU@45401|Hyphomicrobiaceae
EC1.1.2.4
DescriptionFAD linked oxidases, C-terminal domain
Cds size807
COG categoryC
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185980.8508744-CDS-P-wetherbeei_contig13304:1039..18461683185980.8508744-CDS-P-wetherbeei_contig13304:1039..1846Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13304 1040..1846 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13304.1.1prot_P-wetherbeei_contig13304.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13304 1040..1846 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13304.1.1

>prot_P-wetherbeei_contig13304.1.1 ID=prot_P-wetherbeei_contig13304.1.1|Name=mRNA_P-wetherbeei_contig13304.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=269bp
MTADGSRPPLNAPTPDLIRRLSEIVGREHALVDPDQQLPFLREMRDLYIG
KSPLVLRPADTDQVARCMALCNEARVAVVPQAGNTGLVGGQVPWERGDEI
VLSIARLNKVRHVDAAGYNMTVEAGLTLAECQGEADKAGRYFPLSLPSEG
SCRIGGNMGTNAGGVAVLAYGNTRQLIMGVEVVLADGRIVPGLKALKKDN
TGYDLRDLFIGSEGTLGIITAAVLKLFPRPAEKATAFIALPKLESALDLF
TLAQNTSLTNLTAFEFLSR
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mRNA from alignment at P-wetherbeei_contig13304:1040..1846+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13304.1.1 ID=mRNA_P-wetherbeei_contig13304.1.1|Name=mRNA_P-wetherbeei_contig13304.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=807bp|location=Sequence derived from alignment at P-wetherbeei_contig13304:1040..1846+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACCGCAGATGGCAGCCGTCCGCCGCTCAATGCCCCCACCCCGGACCT GATCCGCCGCCTCAGCGAGATCGTCGGCCGCGAGCACGCGCTCGTCGATC CCGACCAGCAACTTCCCTTCCTTCGCGAGATGCGCGACCTCTATATCGGC AAGTCGCCGCTGGTGCTGCGGCCGGCCGATACCGATCAGGTCGCGCGCTG CATGGCGCTGTGCAACGAGGCGCGCGTTGCAGTCGTCCCGCAGGCGGGCA ATACCGGACTGGTCGGGGGACAGGTGCCGTGGGAGCGCGGCGACGAGATC GTGCTTTCGATTGCCCGGCTGAACAAGGTCCGCCACGTCGATGCGGCCGG TTACAATATGACGGTAGAGGCCGGCCTGACGCTCGCGGAGTGCCAGGGGG AAGCCGACAAGGCCGGGCGATATTTCCCGCTGTCGTTGCCGTCGGAAGGC AGCTGCCGGATCGGCGGCAACATGGGCACCAATGCCGGCGGCGTGGCGGT TCTGGCCTATGGCAATACGCGACAGCTCATCATGGGCGTCGAGGTGGTGC TGGCCGACGGGCGCATCGTCCCCGGCCTGAAGGCGCTCAAGAAGGACAAT ACGGGCTACGACCTGCGCGACCTGTTCATCGGCTCGGAAGGCACGCTCGG CATCATCACGGCGGCCGTGCTCAAGCTATTTCCAAGACCAGCCGAGAAAG CGACGGCCTTCATCGCGTTGCCCAAGCTCGAGTCCGCCCTCGACCTCTTC ACGCTTGCGCAGAACACCTCGCTGACCAATCTGACGGCGTTCGAGTTCCT CTCGCGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13304:1040..1846+

>mRNA_P-wetherbeei_contig13304.1.1 ID=mRNA_P-wetherbeei_contig13304.1.1|Name=mRNA_P-wetherbeei_contig13304.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=807bp|location=Sequence derived from alignment at P-wetherbeei_contig13304:1040..1846+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACCGCAGATGGCAGCCGTCCGCCGCTCAATGCCCCCACCCCGGACCT
GATCCGCCGCCTCAGCGAGATCGTCGGCCGCGAGCACGCGCTCGTCGATC
CCGACCAGCAACTTCCCTTCCTTCGCGAGATGCGCGACCTCTATATCGGC
AAGTCGCCGCTGGTGCTGCGGCCGGCCGATACCGATCAGGTCGCGCGCTG
CATGGCGCTGTGCAACGAGGCGCGCGTTGCAGTCGTCCCGCAGGCGGGCA
ATACCGGACTGGTCGGGGGACAGGTGCCGTGGGAGCGCGGCGACGAGATC
GTGCTTTCGATTGCCCGGCTGAACAAGGTCCGCCACGTCGATGCGGCCGG
TTACAATATGACGGTAGAGGCCGGCCTGACGCTCGCGGAGTGCCAGGGGG
AAGCCGACAAGGCCGGGCGATATTTCCCGCTGTCGTTGCCGTCGGAAGGC
AGCTGCCGGATCGGCGGCAACATGGGCACCAATGCCGGCGGCGTGGCGGT
TCTGGCCTATGGCAATACGCGACAGCTCATCATGGGCGTCGAGGTGGTGC
TGGCCGACGGGCGCATCGTCCCCGGCCTGAAGGCGCTCAAGAAGGACAAT
ACGGGCTACGACCTGCGCGACCTGTTCATCGGCTCGGAAGGCACGCTCGG
CATCATCACGGCGGCCGTGCTCAAGCTATTTCCAAGACCAGCCGAGAAAG
CGACGGCCTTCATCGCGTTGCCCAAGCTCGAGTCCGCCCTCGACCTCTTC
ACGCTTGCGCAGAACACCTCGCTGACCAATCTGACGGCGTTCGAGTTCCT
CTCGCGG
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