mRNA_P-wetherbeei_contig13295.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13295.1.1 vs. uniprot
Match: A0A1F6VI37_9PROT (Uncharacterized protein n=1 Tax=Candidatus Muproteobacteria bacterium RBG_16_60_9 TaxID=1817755 RepID=A0A1F6VI37_9PROT) HSP 1 Score: 177 bits (448), Expect = 4.750e-52 Identity = 82/146 (56.16%), Postives = 111/146 (76.03%), Query Frame = 1
Query: 1 MTGTEIIHIPYKGGAPALSDLLGGQIPALVTGLPAGLGAARSGRARALGVTTARRAAQLPDVPTIAEAGVPGYEVSSWVGLCAPAGVPKAIVAKLNADIVKAIGMPDTRQRLEDQGVEAAPNTPEQFGEFIVAEIAKWAKVAKSAG 438
+TG +++HIPYKG APA++DLLGGQ+ + LP+ L ++G+ RALGVT+++RA LPD PTIAEAGVPG+E +SW G+ APAG PK +VA+L+ +IVKA+ PDT++RL QG + NTPEQF +I AE KWAKV K++G
Sbjct: 179 LTGVDMVHIPYKGSAPAITDLLGGQVNLMFDNLPSALPHIKTGKLRALGVTSSKRAPALPDAPTIAEAGVPGFEATSWFGVFAPAGTPKEVVARLHKEIVKALNSPDTKERLSGQGADLIGNTPEQFAAYIAAETTKWAKVVKASG 324
BLAST of mRNA_P-wetherbeei_contig13295.1.1 vs. uniprot
Match: A0A536YAM9_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536YAM9_9PROT) HSP 1 Score: 173 bits (438), Expect = 1.100e-50 Identity = 82/150 (54.67%), Postives = 110/150 (73.33%), Query Frame = 1
Query: 1 MTGTEIIHIPYKGGAPALSDLLGGQIPALVTGLPAGLGAARSGRARALGVTTARRAAQLPDVPTIAEAGVPGYEVSSWVGLCAPAGVPKAIVAKLNADIVKAIGMPDTRQRLEDQGVEAAPNTPEQFGEFIVAEIAKWAKVAKSAGIAPE 450
MTG I+H+PYKGGA + +DL GGQ+ ++T +P + RSGR RALGV+TA+RA Q PDVP+I+E VPGYEV+ W GLC P G+ +A+V ++NAD+V+A+ P+T QRL G+E P TPEQF +F+ E+AKWAKV + AGI E
Sbjct: 168 MTGVNIVHVPYKGGAASSADLAGGQVQLVITNMPEQVAYIRSGRTRALGVSTAKRAPQFPDVPSISET-VPGYEVTVWYGLCGPGGMARALVERINADLVRAVTAPETTQRLSAVGIEPTPGTPEQFTDFVRGELAKWAKVIRDAGIPAE 316
BLAST of mRNA_P-wetherbeei_contig13295.1.1 vs. uniprot
Match: A0A1F4E460_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4E460_9PROT) HSP 1 Score: 170 bits (431), Expect = 5.000e-50 Identity = 86/151 (56.95%), Postives = 111/151 (73.51%), Query Frame = 1
Query: 1 MTGTEIIHIPYKGGAPALSDLLGGQIPALVTGLPAG-LGAARSGRARALGVTTARRAAQLPDVPTIAEAGVPGYEVSSWVGLCAPAGVPKAIVAKLNADIVKAIGMPDTRQRLEDQGVEAAPNTPEQFGEFIVAEIAKWAKVAKSAGIAPE 450
MTG I+H+PYKG APAL+D++ G + + V L G LGA ++GR RALGVT+A+R Q+PDVPT AE+GVPGYEV+ W G+C + VP+ I+AKLNADI K +G P ++RLEDQG+E AP T E F + AEIAKW KV + AG+A E
Sbjct: 133 MTGINIVHVPYKGAAPALTDVMSGHMESSVGNLAGGPLGAIKAGRVRALGVTSAKRNVQIPDVPTFAESGVPGYEVTGWYGICTQSKVPQPILAKLNADINKLLGGP-LKKRLEDQGIEVAPATSEAFAAHVKAEIAKWTKVVREAGLAAE 282
BLAST of mRNA_P-wetherbeei_contig13295.1.1 vs. uniprot
Match: UPI0019BD658F (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019BD658F) HSP 1 Score: 171 bits (432), Expect = 8.790e-50 Identity = 79/147 (53.74%), Postives = 108/147 (73.47%), Query Frame = 1
Query: 1 MTGTEIIHIPYKGGAPALSDLLGGQIPALVTGLPAGLGAARSGRARALGVTTARRAAQLPDVPTIAEAGVPGYEVSSWVGLCAPAGVPKAIVAKLNADIVKAIGMPDTRQRLEDQGVEAAPNTPEQFGEFIVAEIAKWAKVAKSAGI 441
MT T ++HIPYKG AP +SDL+ GQ+ + +P +G R+G+ RAL VTTA+R+ Q P++PT+AEAGVPGYE ++W G+ APAG P+ IV + NA+IVK + PD ++R QGVE +TPEQFGEF+ AE+A+W KV + AGI
Sbjct: 167 MTRTYMLHIPYKGSAPVVSDLIAGQVDVMFDNMPNVIGHVRAGKLRALAVTTAQRSPQAPEIPTVAEAGVPGYEQTAWFGVLAPAGTPREIVNRYNAEIVKVLNSPDVKERFGKQGVEVRTSTPEQFGEFLRAEVARWGKVIREAGI 313
BLAST of mRNA_P-wetherbeei_contig13295.1.1 vs. uniprot
Match: A0A1F4DWR9_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DWR9_9PROT) HSP 1 Score: 170 bits (431), Expect = 1.690e-49 Identity = 77/146 (52.74%), Postives = 110/146 (75.34%), Query Frame = 1
Query: 1 MTGTEIIHIPYKGGAPALSDLLGGQIPALVTGLPAGLGAARSGRARALGVTTARRAAQLPDVPTIAEAGVPGYEVSSWVGLCAPAGVPKAIVAKLNADIVKAIGMPDTRQRLEDQGVEAAPNTPEQFGEFIVAEIAKWAKVAKSAG 438
M G +++H+PYKG PA++DL+GGQ+ ++TG+ A + +SG+ R LGVT+A+R A LPD+PTIAE+G+PG++VSSW G+ P G PK IVAK+NA+I K + +P+ RQRL QG + A NTPE+F ++ AE+AKW KVA+ G
Sbjct: 179 MAGIDVVHVPYKGTGPAITDLIGGQVQMMITGVVALMPHIKSGKLRGLGVTSAKRVAALPDLPTIAESGIPGFDVSSWFGVFLPGGTPKPIVAKMNAEIRKILEVPEVRQRLISQGADPASNTPEEFAAYVKAEMAKWGKVARDTG 324
BLAST of mRNA_P-wetherbeei_contig13295.1.1 vs. uniprot
Match: F4GGM7_ALIDK (Uncharacterized protein n=5 Tax=Alicycliphilus TaxID=201096 RepID=F4GGM7_ALIDK) HSP 1 Score: 170 bits (431), Expect = 1.780e-49 Identity = 79/146 (54.11%), Postives = 105/146 (71.92%), Query Frame = 1
Query: 1 MTGTEIIHIPYKGGAPALSDLLGGQIPALVTGLPAGLGAARSGRARALGVTTARRAAQLPDVPTIAEAGVPGYEVSSWVGLCAPAGVPKAIVAKLNADIVKAIGMPDTRQRLEDQGVEAAPNTPEQFGEFIVAEIAKWAKVAKSAG 438
MTGT+++H+PYKG APA++DLLGGQI + +P+ + RSG+ R + VTTARR+ +LPDVPTIAEAGVPGYE SW G+ APA PK ++ KLNA +VK + PD ++++ +QG + TP QF FI AE AKW KV K +G
Sbjct: 181 MTGTDLLHVPYKGSAPAMTDLLGGQISIMFDNMPSAIQHVRSGKLRPIAVTTARRSPELPDVPTIAEAGVPGYEAMSWFGMFAPAATPKPVLDKLNAALVKVLNQPDVKKKIAEQGGDVVAETPAQFAAFIKAESAKWGKVVKESG 326
BLAST of mRNA_P-wetherbeei_contig13295.1.1 vs. uniprot
Match: A0A1F4E5F3_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4E5F3_9PROT) HSP 1 Score: 170 bits (430), Expect = 2.050e-49 Identity = 79/145 (54.48%), Postives = 109/145 (75.17%), Query Frame = 1
Query: 4 TGTEIIHIPYKGGAPALSDLLGGQIPALVTGLPAGLGAARSGRARALGVTTARRAAQLPDVPTIAEAGVPGYEVSSWVGLCAPAGVPKAIVAKLNADIVKAIGMPDTRQRLEDQGVEAAPNTPEQFGEFIVAEIAKWAKVAKSAG 438
TG ++ H+PYKG +PA++ LLGG+I V+ +P L ++GR +ALGVT+A+R A LPDVPTIAE+G+PGYEV++W G+ PAGVPK I+A+L+ +IV+ + +PD RQR +G + APNTPEQF FI +EIAKW K K +G
Sbjct: 174 TGVKMTHVPYKGASPAITGLLGGEIAIYVSSIPPALPFMKAGRLKALGVTSAKRTATLPDVPTIAESGLPGYEVTNWYGVMVPAGVPKDILARLHTEIVRILQLPDVRQRFAGEGGDVAPNTPEQFAAFIRSEIAKWGKAVKDSG 318
BLAST of mRNA_P-wetherbeei_contig13295.1.1 vs. uniprot
Match: A0A5C8NZ61_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Burkholderiaceae TaxID=119060 RepID=A0A5C8NZ61_9BURK) HSP 1 Score: 169 bits (429), Expect = 3.740e-49 Identity = 83/146 (56.85%), Postives = 105/146 (71.92%), Query Frame = 1
Query: 1 MTGTEIIHIPYKGGAPALSDLLGGQIPALVTGLPAGLGAARSGRARALGVTTARRAAQLPDVPTIAEAGVPGYEVSSWVGLCAPAGVPKAIVAKLNADIVKAIGMPDTRQRLEDQGVEAAPNTPEQFGEFIVAEIAKWAKVAKSAG 438
MTGT + HIPY+G APA++DLL GQ+ + LP+ + RSG+ RAL VT+A+RA LPDVPTIAEAGVPGYE SSW G+ APAG P+ IV KL I K++ PD R++L QG N PE+F ++I AEIAKWAKV K++G
Sbjct: 183 MTGTFMTHIPYRGSAPAVADLLAGQVELMFDNLPSAMPHIRSGKLRALAVTSAKRAPALPDVPTIAEAGVPGYEASSWFGIVAPAGTPRPIVDKLQQQIAKSLAQPDVREKLLGQGANPVGNMPEEFAKYIQAEIAKWAKVVKASG 328
BLAST of mRNA_P-wetherbeei_contig13295.1.1 vs. uniprot
Match: A0A328Z5E7_9BURK (Tripartite-type tricarboxylate transporter receptor subunit TctC n=1 Tax=Acidovorax anthurii TaxID=78229 RepID=A0A328Z5E7_9BURK) HSP 1 Score: 168 bits (426), Expect = 1.320e-48 Identity = 79/146 (54.11%), Postives = 104/146 (71.23%), Query Frame = 1
Query: 1 MTGTEIIHIPYKGGAPALSDLLGGQIPALVTGLPAGLGAARSGRARALGVTTARRAAQLPDVPTIAEAGVPGYEVSSWVGLCAPAGVPKAIVAKLNADIVKAIGMPDTRQRLEDQGVEAAPNTPEQFGEFIVAEIAKWAKVAKSAG 438
M +++H+PYKG APA+SDLLG QI + +P+ + R+G+ R L VTTARR+ +LPDVPTIAEAGVPGYE +SW G+ APAG P ++A+LNA IVK + PDT+++L +QG EA TP QF +FI E KW KV K +G
Sbjct: 192 MARVDMVHVPYKGSAPAVSDLLGNQIAIMFDNMPSAIPHVRAGKLRPLAVTTARRSPELPDVPTIAEAGVPGYEATSWFGMFAPAGTPAPVIARLNATIVKVLAQPDTKKKLAEQGAEAYGETPAQFADFIQKESVKWGKVVKESG 337
BLAST of mRNA_P-wetherbeei_contig13295.1.1 vs. uniprot
Match: A0A2S5SU24_9BURK (MFS transporter n=1 Tax=Zhizhongheella caldifontis TaxID=1452508 RepID=A0A2S5SU24_9BURK) HSP 1 Score: 168 bits (425), Expect = 1.340e-48 Identity = 78/146 (53.42%), Postives = 110/146 (75.34%), Query Frame = 1
Query: 1 MTGTEIIHIPYKGGAPALSDLLGGQIPALVTGLPAGLGAARSGRARALGVTTARRAAQLPDVPTIAEAGVPGYEVSSWVGLCAPAGVPKAIVAKLNADIVKAIGMPDTRQRLEDQGVEAAPNTPEQFGEFIVAEIAKWAKVAKSAG 438
MTG ++ H+PY+G APA+SDL+GGQ+ ++ +P+ L + G+ RAL VT+A+R+A PDVPT+AEAGVPGY+V SW GL AP G PKAIV KLNA++ KA+ +PD ++RL + G A+P +P + +FI AE+AKWA V K++G
Sbjct: 179 MTGVDMTHVPYRGSAPAISDLIGGQVQSMFDNMPSALPHVQGGKLRALAVTSAQRSAAAPDVPTLAEAGVPGYDVQSWFGLNAPKGTPKAIVDKLNAEVNKALALPDVQKRLAELGAVASPMSPAAYDKFIKAEVAKWAPVVKASG 324 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13295.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13295.1.1 >prot_P-wetherbeei_contig13295.1.1 ID=prot_P-wetherbeei_contig13295.1.1|Name=mRNA_P-wetherbeei_contig13295.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=151bp MTGTEIIHIPYKGGAPALSDLLGGQIPALVTGLPAGLGAARSGRARALGVback to top mRNA from alignment at P-wetherbeei_contig13295:197..649+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13295.1.1 ID=mRNA_P-wetherbeei_contig13295.1.1|Name=mRNA_P-wetherbeei_contig13295.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=453bp|location=Sequence derived from alignment at P-wetherbeei_contig13295:197..649+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13295:197..649+ >mRNA_P-wetherbeei_contig13295.1.1 ID=mRNA_P-wetherbeei_contig13295.1.1|Name=mRNA_P-wetherbeei_contig13295.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=453bp|location=Sequence derived from alignment at P-wetherbeei_contig13295:197..649+ (Phaeothamnion wetherbeei SAG_119_79)back to top |