mRNA_P-wetherbeei_contig1329.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1329.1.1 vs. uniprot
Match: A0A397B5B3_9STRA (2-oxogl_dehyd_N domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397B5B3_9STRA) HSP 1 Score: 115 bits (288), Expect = 3.920e-30 Identity = 61/116 (52.59%), Postives = 83/116 (71.55%), Query Frame = 1
Query: 31 ARALSSAATSPDTFMQGSNSLYVEEMYHAWRKDPSSVHKSWDVYFQAMDRGLLPEHSFVPPPRVLEVPTAVPAAAGQVALPAAADAMASDSLGIAYLIRAYQVRGHEKANLDPLGI 378
ARA SS+ ++F+ G+N++YVEEMY W KDP+SVHKSWDVYF+ +D+G +P +F+PPP V T V A + A+ A+ D + +LG++YLIRAYQ RGHE A LDPLG+
Sbjct: 27 ARAFSSSPHPSESFLSGTNNVYVEEMYKTWSKDPTSVHKSWDVYFRQVDQGAVPGEAFIPPPTVQSGVTPV-ARSAAAAVNASTDI--NHALGLSYLIRAYQSRGHEVAKLDPLGL 139
BLAST of mRNA_P-wetherbeei_contig1329.1.1 vs. uniprot
Match: A0A2P4XIG5_9STRA (Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component (Fragment) n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XIG5_9STRA) HSP 1 Score: 120 bits (301), Expect = 4.320e-30 Identity = 61/115 (53.04%), Postives = 81/115 (70.43%), Query Frame = 1
Query: 34 RALSSAATSPDTFMQGSNSLYVEEMYHAWRKDPSSVHKSWDVYFQAMDRGLLPEHSFVPPPRVLEVPTAVPAAAGQVALPAAADAMASDSLGIAYLIRAYQVRGHEKANLDPLGI 378
RA SS +TFM G+N+ YVEEMY W+ +PSSVHKSWDVYF+ ++ G +P +F+PPP + + T V + G VA + +D+LG++YLIRAYQVRGHE ANLDPLG+
Sbjct: 40 RAFSSTPHPSETFMTGTNNAYVEEMYSNWKSNPSSVHKSWDVYFRQIESGSVPGEAFIPPPTIQQGVTPVRSVGGAVA----SSTEQNDALGLSYLIRAYQVRGHEAANLDPLGL 150
BLAST of mRNA_P-wetherbeei_contig1329.1.1 vs. uniprot
Match: A0A835Z9M1_9STRA (Oxoglutarate dehydrogenase (succinyl-transferring) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9M1_9STRA) HSP 1 Score: 123 bits (308), Expect = 4.380e-30 Identity = 64/102 (62.75%), Postives = 77/102 (75.49%), Query Frame = 1
Query: 76 QGSNSLYVEEMYHAWRKDPSSVHKSWDVYFQAMDRG-LLPEHSFVPPPRVLEVPTAVPAAAGQVALPAAADAMASDSLGIAYLIRAYQVRGHEKANLDPLGI 378
QG NS+YVE MY AW+ DPSSVHKSWD YF+++D+G + + +FV PPRVLEVPTA AAA P+ SDSLG++YLIRAYQVRGHE A LDPLG+
Sbjct: 20 QGPNSIYVESMYSAWKSDPSSVHKSWDAYFKSIDKGQVASQGAFVAPPRVLEVPTAHTAAA-----PSGTPQTVSDSLGLSYLIRAYQVRGHEAAKLDPLGL 116
BLAST of mRNA_P-wetherbeei_contig1329.1.1 vs. uniprot
Match: A0A7S0SWS4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWS4_9STRA) HSP 1 Score: 114 bits (286), Expect = 1.690e-29 Identity = 56/108 (51.85%), Postives = 76/108 (70.37%), Query Frame = 1
Query: 55 TSPDTFMQGSNSLYVEEMYHAWRKDPSSVHKSWDVYFQAMDRGLLPEHSFVPPPRVLEVPTAVPAAAGQVALPAAADAMASDSLGIAYLIRAYQVRGHEKANLDPLGI 378
T D+F+ GSNS+YVE+MY +WR DP+SVH SW YF+ +D G+ +F PPP ++ + + V L A + +ASDSLG++YLI +YQVRGHEKANLDPLG+
Sbjct: 36 TKTDSFLSGSNSVYVEQMYESWRNDPNSVHSSWSSYFKNLDSGIEASSAFTPPPTLVGSISNI----ANVKLAADSSPIASDSLGLSYLIHSYQVRGHEKANLDPLGL 139
BLAST of mRNA_P-wetherbeei_contig1329.1.1 vs. uniprot
Match: D7FKZ0_ECTSI (Oxoglutarate dehydrogenase (succinyl-transferring) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKZ0_ECTSI) HSP 1 Score: 120 bits (300), Expect = 5.180e-29 Identity = 62/102 (60.78%), Postives = 73/102 (71.57%), Query Frame = 1
Query: 73 MQGSNSLYVEEMYHAWRKDPSSVHKSWDVYFQAMDRGLLPEHSFVPPPRVLEVPTAVPAAAGQVALPAAADAMASDSLGIAYLIRAYQVRGHEKANLDPLGI 378
MQGSNSLYVEEMY AW+ DP SVHKSWDVYF+ D G +F PPRVLEVP+ + A P+ + SDSL ++YLIRAYQV+GHE ANLDPLG+
Sbjct: 1 MQGSNSLYVEEMYEAWKVDPGSVHKSWDVYFRHSDAGKDATAAFTAPPRVLEVPSMAASLPAVAAAPSVGEQ--SDSLSVSYLIRAYQVQGHEAANLDPLGL 100
BLAST of mRNA_P-wetherbeei_contig1329.1.1 vs. uniprot
Match: A0A2D4CF32_PYTIN (Purple acid phosphatase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CF32_PYTIN) HSP 1 Score: 119 bits (298), Expect = 9.760e-29 Identity = 63/123 (51.22%), Postives = 86/123 (69.92%), Query Frame = 1
Query: 19 PMAVARALSSAATSP---DTFMQGSNSLYVEEMYHAWRKDPSSVHKSWDVYFQAMDRGLLPEHSFVPPPRVLEVPTAVPAAAGQVALPAAADAMASDSLGIAYLIRAYQVRGHEKANLDPLGI 378
P+A + S+AT+P + F+ G+N+ YVEEMY +W+ DPSSVHKSWDVYF+ ++RG +P +F+PPP + T V + A AA +D+LG++YLIRAYQVRGHE ANLDPLG+
Sbjct: 7 PVASSLRTFSSATTPHASEMFLTGTNNAYVEEMYSSWKTDPSSVHKSWDVYFRQIERGAVPGEAFIPPPTIQSGVTPVVSTAAS-----AASLDHNDALGLSYLIRAYQVRGHEAANLDPLGL 124
BLAST of mRNA_P-wetherbeei_contig1329.1.1 vs. uniprot
Match: A0A2D4BHY1_PYTIN (Oxoglutarate dehydrogenase (succinyl-transferring) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BHY1_PYTIN) HSP 1 Score: 119 bits (298), Expect = 1.010e-28 Identity = 63/123 (51.22%), Postives = 86/123 (69.92%), Query Frame = 1
Query: 19 PMAVARALSSAATSP---DTFMQGSNSLYVEEMYHAWRKDPSSVHKSWDVYFQAMDRGLLPEHSFVPPPRVLEVPTAVPAAAGQVALPAAADAMASDSLGIAYLIRAYQVRGHEKANLDPLGI 378
P+A + S+AT+P + F+ G+N+ YVEEMY +W+ DPSSVHKSWDVYF+ ++RG +P +F+PPP + T V + A AA +D+LG++YLIRAYQVRGHE ANLDPLG+
Sbjct: 31 PVASSLRTFSSATTPHASEMFLTGTNNAYVEEMYSSWKTDPSSVHKSWDVYFRQIERGAVPGEAFIPPPTIQSGVTPVVSTAAS-----AASLDHNDALGLSYLIRAYQVRGHEAANLDPLGL 148
BLAST of mRNA_P-wetherbeei_contig1329.1.1 vs. uniprot
Match: A0A485LMZ0_9STRA (Oxoglutarate dehydrogenase (succinyl-transferring) n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LMZ0_9STRA) HSP 1 Score: 118 bits (295), Expect = 2.480e-28 Identity = 62/115 (53.91%), Postives = 81/115 (70.43%), Query Frame = 1
Query: 34 RALSSAATSPDTFMQGSNSLYVEEMYHAWRKDPSSVHKSWDVYFQAMDRGLLPEHSFVPPPRVLEVPTAVPAAAGQVALPAAADAMASDSLGIAYLIRAYQVRGHEKANLDPLGI 378
RA SS+ +TF+ G+N++YVEEMY W KDP SVHKSWDVYF+ +D+G +P +F+PPP V T P A A+ ++ D + SLG++YLIRAYQ RGHE ANLDPLG+
Sbjct: 24 RAFSSSPHPSETFLSGTNNVYVEEMYKTWTKDPKSVHKSWDVYFRQIDQGAVPGEAFIPPPTVQTGVT--PVARSTSAVASSTDV--NHSLGLSYLIRAYQSRGHEVANLDPLGL 134
BLAST of mRNA_P-wetherbeei_contig1329.1.1 vs. uniprot
Match: A0A3R7B999_9STRA (2-oxogl_dehyd_N domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7B999_9STRA) HSP 1 Score: 115 bits (288), Expect = 4.120e-28 Identity = 61/116 (52.59%), Postives = 83/116 (71.55%), Query Frame = 1
Query: 31 ARALSSAATSPDTFMQGSNSLYVEEMYHAWRKDPSSVHKSWDVYFQAMDRGLLPEHSFVPPPRVLEVPTAVPAAAGQVALPAAADAMASDSLGIAYLIRAYQVRGHEKANLDPLGI 378
ARA SS+ ++F+ G+N++YVEEMY W KDP+SVHKSWDVYF+ +D+G +P +F+PPP V T V A + A+ A+ D + +LG++YLIRAYQ RGHE A LDPLG+
Sbjct: 27 ARAFSSSPHPSESFLSGTNNVYVEEMYKTWSKDPTSVHKSWDVYFRQVDQGAVPGEAFIPPPTVQSGVTPV-ARSAAAAVNASTDI--NHALGLSYLIRAYQSRGHEVAKLDPLGL 139
BLAST of mRNA_P-wetherbeei_contig1329.1.1 vs. uniprot
Match: A0A3L6VYH6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A3L6VYH6_9STRA) HSP 1 Score: 115 bits (288), Expect = 5.250e-28 Identity = 61/116 (52.59%), Postives = 83/116 (71.55%), Query Frame = 1
Query: 31 ARALSSAATSPDTFMQGSNSLYVEEMYHAWRKDPSSVHKSWDVYFQAMDRGLLPEHSFVPPPRVLEVPTAVPAAAGQVALPAAADAMASDSLGIAYLIRAYQVRGHEKANLDPLGI 378
ARA SS+ ++F+ G+N++YVEEMY W KDP+SVHKSWDVYF+ +D+G +P +F+PPP V T V A + A+ A+ D + +LG++YLIRAYQ RGHE A LDPLG+
Sbjct: 27 ARAFSSSPHPSESFLSGTNNVYVEEMYKTWSKDPTSVHKSWDVYFRQVDQGAVPGEAFIPPPTVQSGVTPV-ARSAAAAVNASTDI--NHALGLSYLIRAYQSRGHEVAKLDPLGL 139 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1329.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1329.1.1 >prot_P-wetherbeei_contig1329.1.1 ID=prot_P-wetherbeei_contig1329.1.1|Name=mRNA_P-wetherbeei_contig1329.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=119bp MAVARALSSAATSPDTFMQGSNSLYVEEMYHAWRKDPSSVHKSWDVYFQAback to top mRNA from alignment at P-wetherbeei_contig1329:2932..4317+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1329.1.1 ID=mRNA_P-wetherbeei_contig1329.1.1|Name=mRNA_P-wetherbeei_contig1329.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1386bp|location=Sequence derived from alignment at P-wetherbeei_contig1329:2932..4317+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1329:2932..4317+ >mRNA_P-wetherbeei_contig1329.1.1 ID=mRNA_P-wetherbeei_contig1329.1.1|Name=mRNA_P-wetherbeei_contig1329.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=357bp|location=Sequence derived from alignment at P-wetherbeei_contig1329:2932..4317+ (Phaeothamnion wetherbeei SAG_119_79)back to top |