mRNA_P-wetherbeei_contig13265.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13265.1.1
Unique NamemRNA_P-wetherbeei_contig13265.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13265.1.1 vs. uniprot
Match: A0A835YWD1_9STRA (Putative death-associated protein kinase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWD1_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.880e-57
Identity = 86/126 (68.25%), Postives = 106/126 (84.13%), Query Frame = 1
Query:   28 GSGASGTVWKCTKRTTGEVFAAKIIDLRPFKLRERFSMARVRREVEVMQCLRHPSIIALLDAFESEDQLILVLEYAPGVELFDAILAKNRYTEDEARPIFVQVTRALQYMHGLRIVHRDVKPENVM 405
            G GAS TVW+C +R  G+  AAK++DLRP K RERFSM R+RREV++M+ LRHP+I+ L D FE++DQL+LVLEYA GVELFDAIL + RYTED+ARPIF+QV RAL Y+H L+IVHRDVKPEN+M
Sbjct:    1 GKGASSTVWRCARRADGDALAAKVMDLRPLKFRERFSMERLRREVDIMRQLRHPNIVRLEDVFETDDQLVLVLEYARGVELFDAILTRGRYTEDDARPIFLQVARALYYLHSLQIVHRDVKPENIM 126          
BLAST of mRNA_P-wetherbeei_contig13265.1.1 vs. uniprot
Match: A0A835YLX8_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLX8_9STRA)

HSP 1 Score: 177 bits (448), Expect = 9.160e-53
Identity = 81/126 (64.29%), Postives = 105/126 (83.33%), Query Frame = 1
Query:   28 GSGASGTVWKCTKRTTGEVFAAKIIDLRPFKLRERFSMARVRREVEVMQCLRHPSIIALLDAFESEDQLILVLEYAPGVELFDAILAKNRYTEDEARPIFVQVTRALQYMHGLRIVHRDVKPENVM 405
            G GAS TVW+C  R +G  +AAK+IDLRP K RERF++ R+RREV +M+ L HPSI+ + +AFE+EDQLILVLE+A GVELFDAILA+ RY+ED+ARP+F+QV RAL Y+H + ++HRDVKPEN+M
Sbjct:    1 GKGASSTVWRCVDRRSGVAYAAKVIDLRPLKFRERFNVERLRREVNIMRKLHHPSIVNMENAFETEDQLILVLEFAQGVELFDAILARKRYSEDDARPVFLQVARALYYLHSMNVLHRDVKPENIM 126          
BLAST of mRNA_P-wetherbeei_contig13265.1.1 vs. uniprot
Match: D7G8N3_ECTSI (Calcium/ calmodulin-dependent protein kinase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8N3_ECTSI)

HSP 1 Score: 180 bits (457), Expect = 7.720e-50
Identity = 97/163 (59.51%), Postives = 119/163 (73.01%), Query Frame = 1
Query:    1 SAFALETQLGSGASGTVWKCT--------KRT----------TGEVFAAKIIDLRPFKLRERFSMARVRREVEVMQCLRHPSIIALLDAFESEDQLILVLEYAPGVELFDAILAKNRYTEDEARPIFVQVTRALQYMHGLRIVHRDVKPENVMCMVRRKMPHG 435
            S + L  Q+GSGASGTVWKC         KR            G ++AAKIIDLRPFKLRERFSM R+ REV++M+ LRHP+II L++A ++ +QL+L+LEYAPGVELFDAIL+K  ++E EARP+FVQV RALQYMH   IVHRDVKPENVM ++ R  P G
Sbjct:   38 SRYELLEQVGSGASGTVWKCRLAPGNGPPKRAGGPVAGEDPVPGRIYAAKIIDLRPFKLRERFSMQRLMREVDIMRRLRHPNIIHLVEALDTPEQLVLILEYAPGVELFDAILSKASFSESEARPVFVQVARALQYMHSKSIVHRDVKPENVM-IIDRTAPDG 199          
BLAST of mRNA_P-wetherbeei_contig13265.1.1 vs. uniprot
Match: W7TL39_9STRA (Protein serine threonine kinase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TL39_9STRA)

HSP 1 Score: 168 bits (426), Expect = 2.650e-49
Identity = 84/135 (62.22%), Postives = 99/135 (73.33%), Query Frame = 1
Query:    7 FALETQLGSGASGTVWKCTKRTTGEVFAAKIIDLRPFKLRERFSMARVRREVEVMQCLRHPSIIALLDAFESEDQLILVLEYAPGVELFDAILAKNRYTEDEARPIFVQVTRALQYMHGLRIVHRDVKPENVMCM 411
            +AL  ++G GA   V +CT R TGE FA K++DLRP +LRE F  AR+RREVE+MQ L HP II L   FE    L+LVLEYA G ELFD+IL K RYTE+EARPIFVQV  AL Y+H L IVHRDVKPENV+ +
Sbjct:   70 YALHEEIGRGAFSVVHRCTNRITGEDFAVKLMDLRPLQLRENFDQARLRREVEIMQRLEHPHIIRLEGVFEDASTLVLVLEYARGTELFDSILQKKRYTEEEARPIFVQVAHALAYLHRLHIVHRDVKPENVILL 204          
BLAST of mRNA_P-wetherbeei_contig13265.1.1 vs. uniprot
Match: A0A4D9CU84_9STRA (Protein kinase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU84_9STRA)

HSP 1 Score: 166 bits (421), Expect = 7.060e-46
Identity = 83/135 (61.48%), Postives = 98/135 (72.59%), Query Frame = 1
Query:    7 FALETQLGSGASGTVWKCTKRTTGEVFAAKIIDLRPFKLRERFSMARVRREVEVMQCLRHPSIIALLDAFESEDQLILVLEYAPGVELFDAILAKNRYTEDEARPIFVQVTRALQYMHGLRIVHRDVKPENVMCM 411
            +AL  ++G GA   V +CT R TGE FA K++DLRP +LRE F  AR+RREVE+MQ L HP II L   FE    L+LVLEYA G ELFD+IL K RYTE+ ARPIFVQV  AL Y+H L IVHRDVKPENV+ +
Sbjct:   70 YALHEEIGRGAFSVVHRCTNRVTGEDFAVKLMDLRPLQLRENFDQARLRREVEIMQRLEHPHIIRLEGVFEDASTLVLVLEYARGTELFDSILQKKRYTEETARPIFVQVAHALAYLHRLHIVHRDVKPENVILL 204          
BLAST of mRNA_P-wetherbeei_contig13265.1.1 vs. uniprot
Match: A0A7S2WFE1_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFE1_9STRA)

HSP 1 Score: 158 bits (399), Expect = 3.530e-42
Identity = 73/135 (54.07%), Postives = 98/135 (72.59%), Query Frame = 1
Query:    7 FALETQLGSGASGTVWKCTKRTTGEVFAAKIIDLRPFKLRERFSMARVRREVEVMQCLRHPSIIALLDAFESEDQLILVLEYAPGVELFDAILAKNRYTEDEARPIFVQVTRALQYMHGLRIVHRDVKPENVMCM 411
            +A    LG GA  TV +C +  TGE  A K+IDLRP +LR+ F   R+ REV +M+ L HP+I+ L D FE  D L+LV+E  PGVELFD+IL+K+RYTEDEARP+F+Q+  AL+Y+H   IVHRD+KPEN++ +
Sbjct:   55 YARHELLGKGAFSTVHRCVRHDTGEACAVKVIDLRPLRLRQHFDAHRLLREVTIMRRLDHPNIVKLYDVFEEPDSLLLVMELVPGVELFDSILSKSRYTEDEARPVFIQIASALKYLHDQNIVHRDIKPENIVLV 189          
BLAST of mRNA_P-wetherbeei_contig13265.1.1 vs. uniprot
Match: A0A7S2HPJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HPJ7_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.850e-41
Identity = 69/142 (48.59%), Postives = 101/142 (71.13%), Query Frame = 1
Query:    7 FALETQLGSGASGTVWKCTKRTTGEVFAAKIIDLRPFKLRERFSMARVRREVEVMQCLRHPSIIALLDAFESEDQLILVLEYAPGVELFDAILAKNRYTEDEARPIFVQVTRALQYMHGLRIVHRDVKPENVMCMVRRKMPH 432
            + ++ +LG GA   V +C++R  G +FA K+I++RP +LR++F M+R+ REV++M  + HP II L + FE  + ++LV+EYA GV+LFD+IL +  Y+E  ARPIF Q+T AL Y+H   IVHRDVKPENV+ +   K PH
Sbjct:   20 YIMDAKLGQGAFSVVHRCSRRKDGLIFAVKLINIRPLRLRQQFDMSRLHREVDIMSRISHPGIIKLYEVFEDSETMMLVMEYADGVDLFDSILQEKSYSEITARPIFHQLTTALAYLHSNSIVHRDVKPENVLIV---KSPH 158          
BLAST of mRNA_P-wetherbeei_contig13265.1.1 vs. uniprot
Match: A0A7S3HNC2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNC2_9STRA)

HSP 1 Score: 152 bits (383), Expect = 7.080e-40
Identity = 70/128 (54.69%), Postives = 96/128 (75.00%), Query Frame = 1
Query:   22 QLGSGASGTVWKCTKRTTGEVFAAKIIDLRPFKLRERFSMARVRREVEVMQCLRHPSIIALLDAFESEDQLILVLEYAPGVELFDAILAKNRYTEDEARPIFVQVTRALQYMHGLRIVHRDVKPENVM 405
            ++G G   TV++   R TG+ +A KI+DLRP +LRERF+  R+RREV++M+ L HP+II  +D FE  D L++V+EY PG ELFD IL +  + E++ARPIFVQ+ RAL Y+H L I+HRDVKPENV+
Sbjct:   73 EIGKGGFSTVYQTKDRRTGKDYAVKIVDLRPLRLRERFNPLRLRREVDIMKRLHHPNIIQFVDVFEDNDNLMMVMEYCPGQELFDVILDRKFFHEEDARPIFVQIARALYYLHSLNILHRDVKPENVL 200          
BLAST of mRNA_P-wetherbeei_contig13265.1.1 vs. uniprot
Match: A0A7S3XLU5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLU5_HETAK)

HSP 1 Score: 136 bits (343), Expect = 1.750e-36
Identity = 64/137 (46.72%), Postives = 94/137 (68.61%), Query Frame = 1
Query:    7 FALETQLGSGASGTVWKCTKRTTGEVFAAKIIDLRPFKLRERFSMARVRREVEVMQCLRHPSIIALLDAFESEDQLILVLEYAPGVELFDAIL--AKNRYTEDEARPIFVQVTRALQYMHGLRIVHRDVKPENVMCM 411
            + L  Q+GSGAS  V+ CT    G  +A K++D+RP K R  FS +++  EV ++Q  +HP+I+ L+D     D+L L++EYAPG ELFD IL   +  YTE++ARPIF QV +AL Y+H + I+HRD+KPEN++ +
Sbjct:   38 YILGEQIGSGASSIVYTCTNMKNGVEYAVKVMDIRPLKFRADFSKSKMINEVHILQKAKHPNIVQLVDTILEGDRLYLIMEYAPGEELFDGILNQPEGHYTEEKARPIFHQVAQALVYLHSVGIIHRDIKPENILLL 174          
BLAST of mRNA_P-wetherbeei_contig13265.1.1 vs. uniprot
Match: A0A7S1UJ38_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJ38_9STRA)

HSP 1 Score: 141 bits (356), Expect = 2.900e-36
Identity = 71/133 (53.38%), Postives = 93/133 (69.92%), Query Frame = 1
Query:    7 FALETQLGSGASGTVWKCTKRTTGEVFAAKIIDLRPFKLRERFSMARVRREVEVMQCLRHPSIIALLDAFESEDQLILVLEYAPGVELFDAILAKNRYTEDEARPIFVQVTRALQYMHGLRIVHRDVKPENVM 405
            + L  +LG GA  TV+KC  R TG  FAAK+IDLRP +LR+ F + R+RRE E+M+ L++P II L + FE+ D LILV+EY PGVELFDAI+A+    E  A  IF Q   AL Y+H   I+HRD+KPEN++
Sbjct:   23 YDLREELGRGAFSTVYKCGHRGTGMEFAAKVIDLRPLRLRQAFKIDRLRREYEIMRKLKNPHIIQLEEVFETADTLILVMEYCPGVELFDAIIAQRSCPEPAAAIIFYQCLVALSYLHRKHIIHRDIKPENIL 155          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13265.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YWD1_9STRA1.880e-5768.25Putative death-associated protein kinase (Fragment... [more]
A0A835YLX8_9STRA9.160e-5364.29Kinase-like domain-containing protein (Fragment) n... [more]
D7G8N3_ECTSI7.720e-5059.51Calcium/ calmodulin-dependent protein kinase 1 n=1... [more]
W7TL39_9STRA2.650e-4962.22Protein serine threonine kinase n=1 Tax=Nannochlor... [more]
A0A4D9CU84_9STRA7.060e-4661.48Protein kinase domain-containing protein n=1 Tax=N... [more]
A0A7S2WFE1_9STRA3.530e-4254.07Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S2HPJ7_9STRA1.850e-4148.59Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S3HNC2_9STRA7.080e-4054.69Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S3XLU5_HETAK1.750e-3646.72Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S1UJ38_9STRA2.900e-3653.38Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13265contigP-wetherbeei_contig13265:578..1386 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G8N3
PFAMsFHA,Pkinase
Model size435
Max annot lvl2759|Eukaryota
KEGG koko:K05869
KEGG Pathwayko04020,ko04024,ko04211,ko04371,ko04380,ko04720,ko04722,ko04725,ko04921,ko04925,ko05031,ko05034,map04020,map04024,map04211,map04371,map04380,map04720,map04722,map04725,map04921,map04925,map05031,map05034
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.27e-50
EggNOG OGsKOG0032@1|root,KOG0032@2759|Eukaryota
EC2.7.11.17
Descriptionprotein serine/threonine kinase activity
Cds size435
COG categoryT
BRITEko00000,ko00001,ko01000,ko01001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185979.349962-CDS-P-wetherbeei_contig13265:577..6791683185979.349962-CDS-P-wetherbeei_contig13265:577..679Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13265 578..679 -
1683185979.3583074-CDS-P-wetherbeei_contig13265:806..9081683185979.3583074-CDS-P-wetherbeei_contig13265:806..908Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13265 807..908 -
1683185979.3652449-CDS-P-wetherbeei_contig13265:1155..13861683185979.3652449-CDS-P-wetherbeei_contig13265:1155..1386Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13265 1156..1386 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13265.1.1prot_P-wetherbeei_contig13265.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13265 578..1386 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13265.1.1

>prot_P-wetherbeei_contig13265.1.1 ID=prot_P-wetherbeei_contig13265.1.1|Name=mRNA_P-wetherbeei_contig13265.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=145bp
SAFALETQLGSGASGTVWKCTKRTTGEVFAAKIIDLRPFKLRERFSMARV
RREVEVMQCLRHPSIIALLDAFESEDQLILVLEYAPGVELFDAILAKNRY
TEDEARPIFVQVTRALQYMHGLRIVHRDVKPENVMCMVRRKMPHG
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mRNA from alignment at P-wetherbeei_contig13265:578..1386-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13265.1.1 ID=mRNA_P-wetherbeei_contig13265.1.1|Name=mRNA_P-wetherbeei_contig13265.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=809bp|location=Sequence derived from alignment at P-wetherbeei_contig13265:578..1386- (Phaeothamnion wetherbeei SAG_119_79)
AGCGCTTTCGCCCTGGAGACCCAGCTCGGTTCGGGTGCATCAGGCACCGT GTGGAAGTGCACGAAGCGGACTACCGGAGAAGTGTTCGCCGCGAAGATAA TCGACCTTCGGCCGTTCAAGCTCCGCGAGCGCTTCAGCATGGCTCGGGTC CGGCGGGAGGTGGAGGTCATGCAGTGCCTCCGCCACCCTAGCATTATTGC GCTCCTCGACGCTTTTGAATCGGAAGACCAGGTGAGGAAAATGATTTTTT CTTTTTCTATCACCGGATTGCCAAATGCAAGTCCTAACACTGACGCTGAA TTCGATTTTTCGCCTTCCGCCAGCGGCATTCTGCGCTGTATTTTGCGTGT GCCTCTTCGATGTCATAGTATTTAAAAGTCTAAATGGCGCCTTACCCTGA TGCCAAAACGACTGAATCCTCGATTGCAACTCTCTCTCTGGCGGCGCTCC TCCGTTACTTGGGTTGGGGCCGCCGCAGCTGATTCTTGTGCTCGAGTACG CTCCGGGAGTCGAGCTCTTCGACGCCATCCTGGCTAAAAACCGCTACACG GAGGACGAGGCCCGGCCCATCTTTGTGCAGGTGCGGCAAAATGAAACTGA TCCGGGAACAATGTAGCCGAGTTTGCTGTTTTCAACCATTGCCTTCTTGA ACCAAGAGGTCTTGATATACCTGTTCTTCCAACGGCGGTCTCCCCGCCTG CCCGCAGGTGACGAGGGCGCTGCAGTACATGCACGGGCTGCGGATCGTCC ACCGCGACGTCAAGCCCGAGAACGTCATGTGCATGGTGAGAAGGAAAATG CCGCATGGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13265:578..1386-

>mRNA_P-wetherbeei_contig13265.1.1 ID=mRNA_P-wetherbeei_contig13265.1.1|Name=mRNA_P-wetherbeei_contig13265.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=435bp|location=Sequence derived from alignment at P-wetherbeei_contig13265:578..1386- (Phaeothamnion wetherbeei SAG_119_79)
AGCGCTTTCGCCCTGGAGACCCAGCTCGGTTCGGGTGCATCAGGCACCGT
GTGGAAGTGCACGAAGCGGACTACCGGAGAAGTGTTCGCCGCGAAGATAA
TCGACCTTCGGCCGTTCAAGCTCCGCGAGCGCTTCAGCATGGCTCGGGTC
CGGCGGGAGGTGGAGGTCATGCAGTGCCTCCGCCACCCTAGCATTATTGC
GCTCCTCGACGCTTTTGAATCGGAAGACCAGCTGATTCTTGTGCTCGAGT
ACGCTCCGGGAGTCGAGCTCTTCGACGCCATCCTGGCTAAAAACCGCTAC
ACGGAGGACGAGGCCCGGCCCATCTTTGTGCAGGTGACGAGGGCGCTGCA
GTACATGCACGGGCTGCGGATCGTCCACCGCGACGTCAAGCCCGAGAACG
TCATGTGCATGGTGAGAAGGAAAATGCCGCATGGA
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