mRNA_P-wetherbeei_contig9974.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9974.2.1 vs. uniprot
Match: L1JX35_GUITC (Sterol desaturase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JX35_GUITC) HSP 1 Score: 155 bits (393), Expect = 3.660e-45 Identity = 67/110 (60.91%), Postives = 85/110 (77.27%), Query Frame = 1 Query: 7 MHLPALYSRLHKYHHHYKAPQPFDDMFINPLEAFGYYCILYSPPFVLRMHAGSFVGYMALMGACGILDHCGVRLRLPGGLYDSKDHDRHHEFTEVNYGFPFLWMDMVHGT 336 MHLP Y HK HH YK+PQPFDDM+I+P+EA GYYCILYSPPFV +H FV YMA+MG CGILDH G++ G +Y+++DHD+HHE + N+ FPF+WMD++HGT Sbjct: 137 MHLPFFYKHFHKMHHSYKSPQPFDDMYIHPVEAVGYYCILYSPPFVFPLHVYGFVLYMAIMGVCGILDHSGIKWGFLG-IYNTEDHDKHHEHFDCNFAFPFVWMDILHGT 245
BLAST of mRNA_P-wetherbeei_contig9974.2.1 vs. uniprot
Match: A0A7S1GXN0_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GXN0_HEMAN) HSP 1 Score: 147 bits (372), Expect = 1.610e-41 Identity = 70/110 (63.64%), Postives = 84/110 (76.36%), Query Frame = 1 Query: 7 MHLPALYSRLHKYHHHYKAPQPFDDMFINPLEAFGYYCILYSPPFVLRMHAGSFVGYMALMGACGILDHCGVRLRLPGGLYDSKDHDRHHEFTEVNYGFPFLWMDMVHGT 336 MH YSRLHK HH YK+P+PFDD++I+PLEA GYY ILYSPPF L +HA F YMA+MG CG+LDH GVR+R+PG LY ++DHD HH EVNY FP MD++HGT Sbjct: 176 MHHRFFYSRLHKLHHFYKSPEPFDDLYIHPLEAAGYYAILYSPPFALPIHALGFGFYMAIMGLCGVLDHSGVRVRVPG-LYAAEDHDLHHSKFEVNYAFPHPLMDILHGT 284
BLAST of mRNA_P-wetherbeei_contig9974.2.1 vs. uniprot
Match: A0A482SNF4_9ARCH (Fatty acid hydroxylase family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SNF4_9ARCH) HSP 1 Score: 145 bits (365), Expect = 6.370e-41 Identity = 62/110 (56.36%), Postives = 82/110 (74.55%), Query Frame = 1 Query: 7 MHLPALYSRLHKYHHHYKAPQPFDDMFINPLEAFGYYCILYSPPFVLRMHAGSFVGYMALMGACGILDHCGVRLRLPGGLYDSKDHDRHHEFTEVNYGFPFLWMDMVHGT 336 MHL Y HK HH YKAP+PFDDM+I+P+EAFGYYCILY+PPF+ MH SF+ YM +MG G++DH G++ +P +Y++ DHD HH EVNY FPF ++D++HGT Sbjct: 133 MHLKFFYIAFHKMHHQYKAPEPFDDMYIHPVEAFGYYCILYAPPFLFTMHYVSFIAYMVIMGIFGVMDHSGIKFSIPA-IYNTVDHDSHHAKFEVNYSFPFPYLDILHGT 241
BLAST of mRNA_P-wetherbeei_contig9974.2.1 vs. uniprot
Match: A0A7S3D0N0_9EUKA (Hypothetical protein n=4 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D0N0_9EUKA) HSP 1 Score: 144 bits (363), Expect = 1.270e-40 Identity = 62/110 (56.36%), Postives = 82/110 (74.55%), Query Frame = 1 Query: 7 MHLPALYSRLHKYHHHYKAPQPFDDMFINPLEAFGYYCILYSPPFVLRMHAGSFVGYMALMGACGILDHCGVRLRLPGGLYDSKDHDRHHEFTEVNYGFPFLWMDMVHGT 336 MHL Y HKYHH++K+P+PFDDM+I+PLEA GYY I+YS PF++ MH +F GYM ++G G++DH G++ P Y S+DHD HHE EVNY FPF+WMD++HGT Sbjct: 137 MHLRWFYCTFHKYHHYFKSPEPFDDMYIHPLEALGYYIIMYSTPFLIPMHWTAFAGYMIVVGVAGVMDHSGIKFHFPL-FYASEDHDLHHEKYEVNYSFPFMWMDILHGT 245
BLAST of mRNA_P-wetherbeei_contig9974.2.1 vs. uniprot
Match: C1FEX9_MICCC (C-4 sterol methyl oxidase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FEX9_MICCC) HSP 1 Score: 143 bits (361), Expect = 3.450e-40 Identity = 65/113 (57.52%), Postives = 85/113 (75.22%), Query Frame = 1 Query: 1 QAMHLPALYSRLHKYHHHYKAPQPFDDMFINPLEAFGYYCILYSPPF-VLRMHAGSFVGYMALMGACGILDHCGVRLRLPGGLYDSKDHDRHHEFTEVNYGFPFLWMDMVHGT 336 +AMHLP +Y LHK+HHHYK+PQP+DD+FI+P E+FGY ILYSP F V + +F+ YM +MGACG+LDHCGV++R P G YD++ HD HH + N+ FPF MD +HGT Sbjct: 163 RAMHLPRVYRLLHKFHHHYKSPQPWDDLFIHPAESFGYCLILYSPAFCVPSLPVQAFLLYMTIMGACGVLDHCGVKMRWPFGAYDTQFHDVHHRSFDANFAFPFPTMDRLHGT 275
BLAST of mRNA_P-wetherbeei_contig9974.2.1 vs. uniprot
Match: A0A1V9YQH7_9STRA (Sterol desaturase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YQH7_9STRA) HSP 1 Score: 142 bits (357), Expect = 5.580e-40 Identity = 64/110 (58.18%), Postives = 81/110 (73.64%), Query Frame = 1 Query: 7 MHLPALYSRLHKYHHHYKAPQPFDDMFINPLEAFGYYCILYSPPFVLRMHAGSFVGYMALMGACGILDHCGVRLRLPGGLYDSKDHDRHHEFTEVNYGFPFLWMDMVHGT 336 +H A+Y+R+HK HHHYK P+PFDDM+++P E YY +LY PPFVL MH SFV YM LMG G+LDH GV +R+P +YD++DHD HH NYGFPF +D+VHGT Sbjct: 128 LHTRAMYTRIHKVHHHYKRPRPFDDMYMHPCEGMAYYWVLYGPPFVLPMHLHSFVVYMVLMGTFGLLDHSGVPVRIPF-VYDTRDHDVHHTRVTYNYGFPFQLLDVVHGT 236
BLAST of mRNA_P-wetherbeei_contig9974.2.1 vs. uniprot
Match: A0A835YXK7_9STRA (Fatty acid hydroxylase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXK7_9STRA) HSP 1 Score: 139 bits (350), Expect = 7.260e-40 Identity = 61/109 (55.96%), Postives = 75/109 (68.81%), Query Frame = 1 Query: 10 HLPALYSRLHKYHHHYKAPQPFDDMFINPLEAFGYYCILYSPPFVLRMHAGSFVGYMALMGACGILDHCGVRLRLPGGLYDSKDHDRHHEFTEVNYGFPFLWMDMVHGT 336 H P Y R HKYHH+YK+P PFDD+FI+P+E F YYCIL++P L + +F YM LMG CG+ DH GVR+ L G YDS +HD HH VN+GFPF W D +HGT Sbjct: 52 HTPFFYRRFHKYHHYYKSPSPFDDLFIHPVEGFLYYCILFAPAAALPLRRAAFGAYMTLMGMCGLADHSGVRIAL--GPYDSAEHDLHHSHVNVNFGFPFAWFDRLHGT 158
BLAST of mRNA_P-wetherbeei_contig9974.2.1 vs. uniprot
Match: W7TYR2_9STRA (C-4 sterol methyl oxidase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TYR2_9STRA) HSP 1 Score: 141 bits (356), Expect = 3.230e-39 Identity = 65/110 (59.09%), Postives = 81/110 (73.64%), Query Frame = 1 Query: 7 MHLPALYSRLHKYHHHYKAPQPFDDMFINPLEAFGYYCILYSPPFVLRMHAGSFVGYMALMGACGILDHCGVRLRLPGGLYDSKDHDRHHEFTEVNYGFPFLWMDMVHGT 336 MH +Y R HK+HH YKAP PFDDM+I PLEA GYY ILYSP VL MH SF Y+ L+G CGILDH G+ +RLP +YD++ HD HH +T N+GFPF ++D++HGT Sbjct: 187 MHYGPVYRRFHKHHHFYKAPAPFDDMYIAPLEALGYYFILYSPALVLPMHVLSFAVYLTLLGLCGILDHSGIDVRLPR-VYDTRFHDIHHSYTNANFGFPFPFLDVLHGT 295
BLAST of mRNA_P-wetherbeei_contig9974.2.1 vs. uniprot
Match: A0A5A8E491_CAFRO (Hypothetical protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E491_CAFRO) HSP 1 Score: 136 bits (343), Expect = 1.860e-37 Identity = 61/112 (54.46%), Postives = 78/112 (69.64%), Query Frame = 1 Query: 1 QAMHLPALYSRLHKYHHHYKAPQPFDDMFINPLEAFGYYCILYSPPFVLRMHAGSFVGYMALMGACGILDHCGVRLRLPGGLYDSKDHDRHHEFTEVNYGFPFLWMDMVHGT 336 + MH P LY +H HH K+P+PFDDM I+P+EA GYY ILYSP F+ MH F+ YMA+MG G+LDHCG L LP LYD++ HD HHE +VN+GFP +D++ GT Sbjct: 154 RVMHFPWLYRNVHHLHHFNKSPEPFDDMLIHPVEAVGYYIILYSPAFLFPMHVSVFLAYMAIMGVTGVLDHCGAVLGLPLSLYDTRHHDHHHELVDVNFGFPSAAIDVLCGT 265
BLAST of mRNA_P-wetherbeei_contig9974.2.1 vs. uniprot
Match: A0A485KEW3_9STRA (Aste57867_4084 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KEW3_9STRA) HSP 1 Score: 135 bits (340), Expect = 3.460e-37 Identity = 60/110 (54.55%), Postives = 81/110 (73.64%), Query Frame = 1 Query: 7 MHLPALYSRLHKYHHHYKAPQPFDDMFINPLEAFGYYCILYSPPFVLRMHAGSFVGYMALMGACGILDHCGVRLRLPGGLYDSKDHDRHHEFTEVNYGFPFLWMDMVHGT 336 +H+ ALY R+HK HHHYK PQPFDDM+++P E Y+CILY PPFVL M+ +F+ YM +MG G+LDH G+ +P +Y ++DH HH VNYGFPF+++D+VHGT Sbjct: 130 LHIRALYVRVHKVHHHYKRPQPFDDMYMHPFEGAIYFCILYGPPFVLPMNVHAFILYMVVMGLFGVLDHSGLSFHIPL-VYKAQDHAVHHAKVNVNYGFPFVYLDLVHGT 238 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9974.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9974.2.1 >prot_P-wetherbeei_contig9974.2.1 ID=prot_P-wetherbeei_contig9974.2.1|Name=mRNA_P-wetherbeei_contig9974.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=110bp MHLPALYSRLHKYHHHYKAPQPFDDMFINPLEAFGYYCILYSPPFVLRMHback to top mRNA from alignment at P-wetherbeei_contig9974:1912..2432- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9974.2.1 ID=mRNA_P-wetherbeei_contig9974.2.1|Name=mRNA_P-wetherbeei_contig9974.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=521bp|location=Sequence derived from alignment at P-wetherbeei_contig9974:1912..2432- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9974:1912..2432- >mRNA_P-wetherbeei_contig9974.2.1 ID=mRNA_P-wetherbeei_contig9974.2.1|Name=mRNA_P-wetherbeei_contig9974.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=330bp|location=Sequence derived from alignment at P-wetherbeei_contig9974:1912..2432- (Phaeothamnion wetherbeei SAG_119_79)back to top |