mRNA_P-wetherbeei_contig9966.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9966.3.1
Unique NamemRNA_P-wetherbeei_contig9966.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig9966.3.1 vs. uniprot
Match: A0A836CMV2_9STRA (Protein arginine methyltransferase NDUFAF7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMV2_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 6.800e-17
Identity = 38/54 (70.37%), Postives = 44/54 (81.48%), Query Frame = 1 
Query:    1 EDGGGALFVDYGENHAQQDTLRAFKGHAEVPLLAEPGLADITADVDFGTLRRVA 162
            E GGGALF+DYGE+H   DT+RAF+ H EV +LAEPG+ADITADVDF  LRR A
Sbjct:  311 EHGGGALFIDYGEDHPAGDTVRAFRSHQEVHVLAEPGMADITADVDFAALRRCA 364
[Close]
BLAST of mRNA_P-wetherbeei_contig9966.3.1 vs. uniprot
Match: D8LD00_ECTSI (Protein arginine methyltransferase NDUFAF7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD00_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 1.360e-16
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 1 
Query:    1 EDGGGALFVDYGENHAQQDTLRAFKGHAEVPLLAEPGLADITADVDFGTLRRV 159
            +D GGALFVDYGE HA  D+LR FKGH EVP+L++PG AD+TADV+FG LRRV
Sbjct:  353 QDRGGALFVDYGEAHALGDSLRCFKGHEEVPVLSDPGEADMTADVNFGLLRRV 405
[Close]
BLAST of mRNA_P-wetherbeei_contig9966.3.1 vs. uniprot
Match: A0A7S3GPT7_9STRA (Protein arginine methyltransferase NDUFAF7 (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GPT7_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 6.010e-14
Identity = 33/55 (60.00%), Postives = 42/55 (76.36%), Query Frame = 1 
Query:    7 GGGALFVDYGENHAQQDTLRAFKGHAEVPLLAEPGLADITADVDFGTLRRVAGQK 171
            GG AL  DYGE+ AQ+D+LRAFK H +V +L++PGL D+TADVDF   RR A +K
Sbjct:  169 GGAALLFDYGEDFAQEDSLRAFKKHQQVSVLSQPGLVDVTADVDFALCRRAAERK 223
[Close]
BLAST of mRNA_P-wetherbeei_contig9966.3.1 vs. uniprot
Match: I3KR05_ORENI (Protein arginine methyltransferase NDUFAF7 n=13 Tax=Pseudocrenilabrinae TaxID=318546 RepID=I3KR05_ORENI)

HSP 1 Score: 72.0 bits (175), Expect = 2.450e-13
Identity = 34/55 (61.82%), Postives = 39/55 (70.91%), Query Frame = 1 
Query:    1 EDGGGALFVDYGENHAQQDTLRAFKGHAEVPLLAEPGLADITADVDFGTLRRVAG 165
            EDGG AL +DYG N  + DT R FKGH    +LA PG AD+TADVDF  LRR+AG
Sbjct:  304 EDGGAALIIDYGHNGTKTDTFRGFKGHQLHDVLASPGSADLTADVDFNYLRRMAG 358
[Close]
BLAST of mRNA_P-wetherbeei_contig9966.3.1 vs. uniprot
Match: A0A8C4FM35_9TELE (Protein arginine methyltransferase NDUFAF7 n=5 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4FM35_9TELE)

HSP 1 Score: 71.2 bits (173), Expect = 4.570e-13
Identity = 34/57 (59.65%), Postives = 40/57 (70.18%), Query Frame = 1 
Query:    1 EDGGGALFVDYGENHAQQDTLRAFKGHAEVPLLAEPGLADITADVDFGTLRRVAGQK 171
            EDGG AL +DYG +  + DT R FK H    +LAEPG AD+TADVDF  LRRVAG +
Sbjct:  298 EDGGAALIMDYGHDGVKTDTFRGFKAHKIHDVLAEPGTADLTADVDFSYLRRVAGDR 354
[Close]
BLAST of mRNA_P-wetherbeei_contig9966.3.1 vs. uniprot
Match: A0A3Q1HBM3_ANATE (Protein arginine methyltransferase NDUFAF7 n=6 Tax=Anabas testudineus TaxID=64144 RepID=A0A3Q1HBM3_ANATE)

HSP 1 Score: 70.9 bits (172), Expect = 6.170e-13
Identity = 34/55 (61.82%), Postives = 39/55 (70.91%), Query Frame = 1 
Query:    1 EDGGGALFVDYGENHAQQDTLRAFKGHAEVPLLAEPGLADITADVDFGTLRRVAG 165
            EDGG AL  DYG +  + DT RAFKGH    +LA PG AD+TADVDF  LRR+AG
Sbjct:  278 EDGGAALIADYGHDGTKTDTFRAFKGHQLHDVLASPGTADLTADVDFSYLRRMAG 332
[Close]
BLAST of mRNA_P-wetherbeei_contig9966.3.1 vs. uniprot
Match: UPI001B3ACDD7 (protein arginine methyltransferase NDUFAF7, mitochondrial n=1 Tax=Toxotes jaculatrix TaxID=941984 RepID=UPI001B3ACDD7)

HSP 1 Score: 70.9 bits (172), Expect = 6.240e-13
Identity = 34/55 (61.82%), Postives = 38/55 (69.09%), Query Frame = 1 
Query:    1 EDGGGALFVDYGENHAQQDTLRAFKGHAEVPLLAEPGLADITADVDFGTLRRVAG 165
            EDGG AL  DYG N  + DT R FKGH    +LA PG AD+TADVDF  LRR+AG
Sbjct:  294 EDGGAALIADYGHNGTKTDTFRGFKGHQLHDVLASPGSADLTADVDFSYLRRMAG 348
[Close]
BLAST of mRNA_P-wetherbeei_contig9966.3.1 vs. uniprot
Match: B8JLT4_DANRE (Protein arginine methyltransferase NDUFAF7 (Fragment) n=1 Tax=Danio rerio TaxID=7955 RepID=B8JLT4_DANRE)

HSP 1 Score: 69.7 bits (169), Expect = 7.930e-13
Identity = 33/57 (57.89%), Postives = 40/57 (70.18%), Query Frame = 1 
Query:    1 EDGGGALFVDYGENHAQQDTLRAFKGHAEVPLLAEPGLADITADVDFGTLRRVAGQK 171
            EDGG AL VDYG +  + DT R FKGH    +L  PGLAD+TADVDF  LR++AG +
Sbjct:  150 EDGGAALIVDYGHDGTKTDTFRGFKGHQIHDVLEAPGLADLTADVDFSYLRKMAGDQ 206
[Close]
BLAST of mRNA_P-wetherbeei_contig9966.3.1 vs. uniprot
Match: NDUF7_DANRE (Protein arginine methyltransferase NDUFAF7, mitochondrial n=1 Tax=Danio rerio TaxID=7955 RepID=NDUF7_DANRE)

HSP 1 Score: 69.7 bits (169), Expect = 1.570e-12
Identity = 33/57 (57.89%), Postives = 40/57 (70.18%), Query Frame = 1 
Query:    1 EDGGGALFVDYGENHAQQDTLRAFKGHAEVPLLAEPGLADITADVDFGTLRRVAGQK 171
            EDGG AL VDYG +  + DT R FKGH    +L  PGLAD+TADVDF  LR++AG +
Sbjct:  278 EDGGAALIVDYGHDGTKTDTFRGFKGHQIHDVLEAPGLADLTADVDFSYLRKMAGDQ 334
[Close]
BLAST of mRNA_P-wetherbeei_contig9966.3.1 vs. uniprot
Match: UPI0009B357A0 (LOW QUALITY PROTEIN: protein arginine methyltransferase NDUFAF7, mitochondrial n=1 Tax=Labrus bergylta TaxID=56723 RepID=UPI0009B357A0)

HSP 1 Score: 69.7 bits (169), Expect = 1.600e-12
Identity = 33/55 (60.00%), Postives = 38/55 (69.09%), Query Frame = 1 
Query:    1 EDGGGALFVDYGENHAQQDTLRAFKGHAEVPLLAEPGLADITADVDFGTLRRVAG 165
            EDGG AL  DYG N  + DT R FKGH    +L+ PG AD+TADVDF  LRR+AG
Sbjct:  297 EDGGAALIADYGHNGTKTDTFRGFKGHQLHDVLSSPGSADLTADVDFSYLRRMAG 351
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9966.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CMV2_9STRA6.800e-1770.37Protein arginine methyltransferase NDUFAF7 n=1 Tax... [more]
D8LD00_ECTSI1.360e-1671.70Protein arginine methyltransferase NDUFAF7 n=2 Tax... [more]
A0A7S3GPT7_9STRA6.010e-1460.00Protein arginine methyltransferase NDUFAF7 (Fragme... [more]
I3KR05_ORENI2.450e-1361.82Protein arginine methyltransferase NDUFAF7 n=13 Ta... [more]
A0A8C4FM35_9TELE4.570e-1359.65Protein arginine methyltransferase NDUFAF7 n=5 Tax... [more]
A0A3Q1HBM3_ANATE6.170e-1361.82Protein arginine methyltransferase NDUFAF7 n=6 Tax... [more]
UPI001B3ACDD76.240e-1361.82protein arginine methyltransferase NDUFAF7, mitoch... [more]
B8JLT4_DANRE7.930e-1357.89Protein arginine methyltransferase NDUFAF7 (Fragme... [more]
NDUF7_DANRE1.570e-1257.89Protein arginine methyltransferase NDUFAF7, mitoch... [more]
UPI0009B357A01.600e-1260.00LOW QUALITY PROTEIN: protein arginine methyltransf... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9966contigP-wetherbeei_contig9966:1426..1879 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LD00
PFAMsMethyltransf_28
Model size174
Max annot lvl2759|Eukaryota
KEGG koko:K18164
KEGG Pathwayko04714,map04714
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005975,GO:0005976,GO:0005977,GO:0006073,GO:0006082,GO:0006091,GO:0006112,GO:0006139,GO:0006163,GO:0006520,GO:0006536,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006907,GO:0006909,GO:0006996,GO:0007005,GO:0008150,GO:0008152,GO:0009064,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009266,GO:0009314,GO:0009416,GO:0009453,GO:0009605,GO:0009628,GO:0009653,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010257,GO:0010506,GO:0010507,GO:0010638,GO:0010821,GO:0010822,GO:0015980,GO:0016043,GO:0016192,GO:0017144,GO:0019222,GO:0019637,GO:0019693,GO:0019752,GO:0022603,GO:0022607,GO:0030154,GO:0030435,GO:0030587,GO:0031154,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0032502,GO:0032981,GO:0033043,GO:0033108,GO:0034622,GO:0034641,GO:0040011,GO:0042330,GO:0042331,GO:0043052,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043933,GO:0043934,GO:0044042,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046034,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051703,GO:0051704,GO:0055086,GO:0055114,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0072521,GO:0090140,GO:0090141,GO:0090702,GO:0098657,GO:0099120,GO:1901135,GO:1901360,GO:1901564,GO:1901605
Exons2
Evalue2.23e-17
EggNOG OGsCOG1565@1|root,KOG2901@2759|Eukaryota
Descriptionprotein-arginine omega-N symmetric methyltransferase activity
Cds size171
COG categoryH
BRITEko00000,ko00001,ko03029
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187119.186676-CDS-P-wetherbeei_contig9966:1427..15111683187119.186676-CDS-P-wetherbeei_contig9966:1427..1511Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9966 1428..1511 -
1683187119.197951-CDS-P-wetherbeei_contig9966:1792..18791683187119.197951-CDS-P-wetherbeei_contig9966:1792..1879Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9966 1793..1879 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9966.3.1prot_P-wetherbeei_contig9966.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9966 1428..1879 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9966.3.1

>prot_P-wetherbeei_contig9966.3.1 ID=prot_P-wetherbeei_contig9966.3.1|Name=mRNA_P-wetherbeei_contig9966.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=57bp
EDGGGALFVDYGENHAQQDTLRAFKGHAEVPLLAEPGLADITADVDFGTL
RRVAGQK
back to top

mRNA from alignment at P-wetherbeei_contig9966:1426..1879-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9966.3.1 ID=mRNA_P-wetherbeei_contig9966.3.1|Name=mRNA_P-wetherbeei_contig9966.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=454bp|location=Sequence derived from alignment at P-wetherbeei_contig9966:1426..1879- (Phaeothamnion wetherbeei SAG_119_79)
GAGGACGGCGGGGGCGCGCTGTTCGTCGACTACGGGGAGAACCACGCCCA
GCAGGACACACTCCGCGCTTTTAAGGGGCACGCCGAGGTCGGTCGTGTTT
TTGTTTTTGTTCACTCTGTATAGATCGTTTGAGAGCTACAGCGCGAGGAT
AGAGGGGTCAGAACCGTGCATCGTGTGCCTTGTGTGCGTTGGCGATGGCT
TGCGGGTTTAAACTCTTTATTCCGACATTTCCTGCTGATGCTAGGCTGTC
TTGGTGTTTTCATGCCGTCTTCTTTTCTTTGGACAACGCAGAGTTTCCAG
CATGTACAGTGGAAGCTCTTCTTCATCCAGCCTAAACCGTCCTGATCGCT
CCTTTTGAACCGGCGAAGGTGCCGTTGCTCGCTGAGCCGGGGCTGGCCGA
CATAACAGCCGACGTGGACTTCGGGACGCTCCGGCGCGTGGCGGGGCAGA
AGCC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig9966:1426..1879-

>mRNA_P-wetherbeei_contig9966.3.1 ID=mRNA_P-wetherbeei_contig9966.3.1|Name=mRNA_P-wetherbeei_contig9966.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=171bp|location=Sequence derived from alignment at P-wetherbeei_contig9966:1426..1879- (Phaeothamnion wetherbeei SAG_119_79)
GAGGACGGCGGGGGCGCGCTGTTCGTCGACTACGGGGAGAACCACGCCCA
GCAGGACACACTCCGCGCTTTTAAGGGGCACGCCGAGGTGCCGTTGCTCG
CTGAGCCGGGGCTGGCCGACATAACAGCCGACGTGGACTTCGGGACGCTC
CGGCGCGTGGCGGGGCAGAAG
back to top