prot_P-wetherbeei_contig9962.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig9962.3.1
Unique Nameprot_P-wetherbeei_contig9962.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length130
Homology
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BLAST of mRNA_P-wetherbeei_contig9962.3.1 vs. uniprot
Match: A0A7S4A0V2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A0V2_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 1.440e-6
Identity = 27/53 (50.94%), Postives = 34/53 (64.15%), Query Frame = 0 
Query:    1 LDSRLATASELFNDCAYPYCLFECCLALLASCGSDEPSLVAQLWTSLIFRETP 53
            L+SRL   SEL+ND A  Y +++ CLA L  CG D+  L  +LWTSLI R  P
Sbjct: 1454 LESRLVGVSELYNDVASRYGMWDVCLATLKVCGHDDEPLAVKLWTSLIKRLVP 1506
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BLAST of mRNA_P-wetherbeei_contig9962.3.1 vs. uniprot
Match: F0YFH0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFH0_AURAN)

HSP 1 Score: 55.5 bits (132), Expect = 2.680e-6
Identity = 28/68 (41.18%), Postives = 38/68 (55.88%), Query Frame = 0 
Query:    1 LDSRLATASELFNDCAYPYCLFECCLALLASCGSDEPSLVAQLWTSLIFRETPRPIQYGAGTASAADA 68
            L+ RL   SEL+ND A  Y +++ CL  L  CG D+  L  +LWTSL+ R  PR  +  +  A   DA
Sbjct: 1533 LEERLVGVSELYNDVASRYGMWDLCLVTLKVCGHDDEPLAVKLWTSLLRRLVPRRARDASAQARLGDA 1600
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9962.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S4A0V2_9STRA1.440e-650.94Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
F0YFH0_AURAN2.680e-641.18Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042538Nucleoporin, Nup155-like, C-terminal, subdomain 3GENE3D1.20.120.1880coord: 1..130
e-value: 2.8E-15
score: 58.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9962contigP-wetherbeei_contig9962:1633..2133 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9962.3.1mRNA_P-wetherbeei_contig9962.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig9962 1633..2133 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig9962.3.1 ID=prot_P-wetherbeei_contig9962.3.1|Name=mRNA_P-wetherbeei_contig9962.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=130bp
LDSRLATASELFNDCAYPYCLFECCLALLASCGSDEPSLVAQLWTSLIFR
ETPRPIQYGAGTASAADAWLHEVAVALAAAKIGAAASFVDSGWLRAACVR
VAAAIASLPGPGRDLVLPLPLIVEELEGLA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042538Nucleoporin_Nup155_C_3