mRNA_P-wetherbeei_contig9959.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9959.4.1 vs. uniprot
Match: D7FKR2_ECTSI (Glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKR2_ECTSI) HSP 1 Score: 92.4 bits (228), Expect = 1.910e-21 Identity = 47/105 (44.76%), Postives = 70/105 (66.67%), Query Frame = 1 Query: 13 EITEELIRKTAALAQLEVTDKEVQRLLPRVRSFLGFVESINAVADSGGGGADSAMEAVGVVVGGLLGDKFLQTDTPEKFAGDGDILANMPVEEGGYLRVPRVGEE 327 +IT +L+RKTA LAQ++V+D+EV L PR+ FLGFVE++ VA++ +D A + G FL+ D+ ++F+ I+ NMP+EEG YLRVP+VGE+ Sbjct: 67 DITPDLVRKTAMLAQIQVSDEEVDVLAPRMEEFLGFVETMKEVAEA----SDGAFATLN------CGSDFLREDSADRFSNVAAIMENMPIEEGNYLRVPKVGED 161
BLAST of mRNA_P-wetherbeei_contig9959.4.1 vs. uniprot
Match: A0A836CJS8_9STRA (C subunit of glutamyl-tRNA and/or aspartyl-tRNA amidotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJS8_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.520e-18 Identity = 50/100 (50.00%), Postives = 62/100 (62.00%), Query Frame = 1 Query: 28 LIRKTAALAQLEVTDKEVQRLLPRVRSFLGFVESINAVADSGGGGADSAMEAVGVVVGGLLGDKFLQTDTPEKFAGDGDILANMPVEEGGYLRVPRVGEE 327 LI KTA LAQLEV+D E ++L+PRVRSFLGFV +++ G AD +G GL FL++D KF I ANMP+ EG YLRVP+VG E Sbjct: 57 LILKTARLAQLEVSDAEAEQLVPRVRSFLGFVAAMDEA-----GAADGDAPPMGDSREGLGEGGFLRSDGAVKFENADAIAANMPLREGEYLRVPKVGAE 151
BLAST of mRNA_P-wetherbeei_contig9959.4.1 vs. uniprot
Match: W7TR28_9STRA (Glutamyl-trna amidotransferase subunit c n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TR28_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 3.330e-16 Identity = 42/107 (39.25%), Postives = 60/107 (56.07%), Query Frame = 1 Query: 7 RPEITEELIRKTAALAQLEVTDKEVQRLLPRVRSFLGFVESINAVADSGGGGADSAMEAVGVVVGGLLGDKFLQTDTPEKFAGDGDILANMPVEEGGYLRVPRVGEE 327 +PE+T ELI+ TA LAQL + E+Q ++PR ++FL FV+ + V DS A +M V + L+ D+P F I NM +E +LRVP+VGEE Sbjct: 48 QPEVTPELIKHTATLAQLHFDEDEIQNMIPRFQAFLSFVDRMQDVPDSAAVSAPDSMPTV---------QEVLRPDSPSIFPNQDAIFTNMAEQEDAFLRVPKVGEE 145
BLAST of mRNA_P-wetherbeei_contig9959.4.1 vs. uniprot
Match: A0A0G4EZ16_VITBC (Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EZ16_VITBC) HSP 1 Score: 67.0 bits (162), Expect = 2.180e-11 Identity = 40/105 (38.10%), Postives = 61/105 (58.10%), Query Frame = 1 Query: 16 ITEELIRKTAALAQLEVTDKEVQRLLPRVRSFLGFVESINAVADSGGGGADSAMEAVGVVV--GGLLGDKFLQTDTPEKFAGDGDILANMPVEEGGYLRVPRVGE 324 + E L+RKTAALA L++TD EV ++ + + FL FV+ + A+ D++ + V+ + L+ DT + F I+ANMP EE G+LR+PRVGE Sbjct: 87 VDEALVRKTAALAHLDLTDDEVSEMVHQFKDFLRFVDDMKAI--------DTSQLDIDVMSPRASVPYRDPLREDTVQPFDNREAIVANMPEEEDGFLRIPRVGE 183
BLAST of mRNA_P-wetherbeei_contig9959.4.1 vs. uniprot
Match: A0A0G4IA18_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4IA18_9ALVE) HSP 1 Score: 63.9 bits (154), Expect = 2.790e-10 Identity = 41/104 (39.42%), Postives = 55/104 (52.88%), Query Frame = 1 Query: 13 EITEELIRKTAALAQLEVTDKEVQRLLPRVRSFLGFVESINAVADSGGGGADSAMEAVGVVVGGLLGDKFLQTDTPEKFAGDGDILANMPVEEGGYLRVPRVGE 324 E+T EL++ TA LA L V++ E+ L+P V FL FV+ +N V D G A L L+ DTP +F G I NMP EE L+VP++GE Sbjct: 78 EVTAELLKNTAKLAGLSVSENEITDLIPEVSKFLKFVDQMNQV-DVDAPGVQELPRAD------LPWSDPLRPDTPNRFNNVGAIWDNMPEEEDEMLKVPQLGE 174
BLAST of mRNA_P-wetherbeei_contig9959.4.1 vs. uniprot
Match: A0A6H5KRS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS3_9PHAE) HSP 1 Score: 60.8 bits (146), Expect = 3.970e-10 Identity = 30/76 (39.47%), Postives = 46/76 (60.53%), Query Frame = 1 Query: 100 VRSFLGFVESINAVADSGGGGADSAMEAVGVVVGGLLGDKFLQTDTPEKFAGDGDILANMPVEEGGYLRVPRVGEE 327 + FLGFVE++ VA++ +D A + G FL+ D+ E+F+ ++ NMP+EEG YLRVP+VGE+ Sbjct: 1 MEEFLGFVETMEEVAEA----SDGAFATLN------CGSDFLREDSAERFSNVAAVMENMPIEEGNYLRVPKVGED 66
BLAST of mRNA_P-wetherbeei_contig9959.4.1 vs. uniprot
Match: A0A7S1X181_9CHLO (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X181_9CHLO) HSP 1 Score: 52.4 bits (124), Expect = 6.680e-6 Identity = 28/100 (28.00%), Postives = 54/100 (54.00%), Query Frame = 1 Query: 31 IRKTAALAQLEVTDKEVQRLLPRVRSFLGFVESINAVADSGGGGADSAMEAVGVVVGGLLGDKFLQTDTPEKFAGDGDILANMPVEEGGYLRVPRVGEEA 330 +R+ A +AQ+ +TD+EV+ P++ S + + + V +G + ++ A+G + L+ D P F D+L +P +EG Y++VP++ EA Sbjct: 87 LRELAKMAQIGITDEEVEEWTPQIGSIVEWFGELGKVDVTG---VEPSLRAMGE-------ESTLREDVPVSFPNKEDLLKQVPDKEGVYVKVPKISTEA 176
BLAST of mRNA_P-wetherbeei_contig9959.4.1 vs. uniprot
Match: A0A2V3J5X7_9FLOR (Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5X7_9FLOR) HSP 1 Score: 49.3 bits (116), Expect = 2.930e-5 Identity = 26/108 (24.07%), Postives = 55/108 (50.93%), Query Frame = 1 Query: 13 EITEELIRKTAALAQLEVTDKEVQRLLPRVRSFLGFVESINAVADSGGGGADSAMEAVGVVVGGLLGDKFLQTDTPEKFAGDGDILANMPVEEGGYLRVPRVGEEASD 336 EI+++ ++ A LAQL ++++EV +++P ++ + F ++ + V G SA + V ++ D P +F ++ +P E Y+RVP++ +D Sbjct: 8 EISKQEVQNIAKLAQLRLSEEEVNKVVPEIKKIINFFDTFSEVDVEGIEPMTSAQDVHNV----------MREDEPSRFHNVDGMMQEVPCSEREYIRVPKLSSNPTD 105
BLAST of mRNA_P-wetherbeei_contig9959.4.1 vs. uniprot
Match: A0A2E1X4A5_9BACT (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E1X4A5_9BACT) HSP 1 Score: 49.7 bits (117), Expect = 3.200e-5 Identity = 37/106 (34.91%), Postives = 54/106 (50.94%), Query Frame = 1 Query: 7 RPEITEELIRKTAALAQLEVTDKEVQRLLPRVRSFLGFVESINAVADSGGGGADSAME--AVGVVVGGLLGDKFLQTDTPEKFAGDGDILANMPVEEGGYLRVPRV 318 RP + EL+RKTA LA+LEV+D+EV ++ + L VE++ +V AD +++ A VVV L D+ L+ +P I N P G PRV Sbjct: 24 RPVVDSELVRKTARLARLEVSDEEVPAMVHHMERILDLVETLRSVEIP----ADLSIDDNARTVVVTQLRADESLEESSPGGPRDQESIGKNAPDWRDGTFVTPRV 125
BLAST of mRNA_P-wetherbeei_contig9959.4.1 vs. uniprot
Match: A0A2E8HG09_9BACT (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=2 Tax=root TaxID=1 RepID=A0A2E8HG09_9BACT) HSP 1 Score: 47.8 bits (112), Expect = 9.340e-5 Identity = 33/103 (32.04%), Postives = 52/103 (50.49%), Query Frame = 1 Query: 16 ITEELIRKTAALAQLEVTDKEVQRLLPRVRSFLGFVESINAVADSGGGGADSAMEAVGVVVGGLLGDKFLQTDTPEKFAGDGDILANMPVEEGGYLRVPRVGE 324 +T E +++ AALA+LE T E +RL + S L ++E +N + D+ G S + V + D PE+FA ++ A P GY +VPR+ E Sbjct: 3 VTVEDVKRIAALARLEFTADEEERLTGELNSILHYMEKLNGL-DTDGVEPTSHVAPVA---------NAFREDEPEEFAHVEELRAQAPEMVEGYYKVPRIIE 95 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9959.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9959.4.1 >prot_P-wetherbeei_contig9959.4.1 ID=prot_P-wetherbeei_contig9959.4.1|Name=mRNA_P-wetherbeei_contig9959.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=113bp MARPEITEELIRKTAALAQLEVTDKEVQRLLPRVRSFLGFVESINAVADSback to top mRNA from alignment at P-wetherbeei_contig9959:1648..2199- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9959.4.1 ID=mRNA_P-wetherbeei_contig9959.4.1|Name=mRNA_P-wetherbeei_contig9959.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=552bp|location=Sequence derived from alignment at P-wetherbeei_contig9959:1648..2199- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9959:1648..2199- >mRNA_P-wetherbeei_contig9959.4.1 ID=mRNA_P-wetherbeei_contig9959.4.1|Name=mRNA_P-wetherbeei_contig9959.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=339bp|location=Sequence derived from alignment at P-wetherbeei_contig9959:1648..2199- (Phaeothamnion wetherbeei SAG_119_79)back to top |