mRNA_P-wetherbeei_contig9957.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9957.3.1
Unique NamemRNA_P-wetherbeei_contig9957.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9957.3.1 vs. uniprot
Match: A0A6I3F593_9ACTN (Thioredoxin-dependent thiol peroxidase n=2 Tax=root TaxID=1 RepID=A0A6I3F593_9ACTN)

HSP 1 Score: 219 bits (557), Expect = 6.480e-71
Identity = 103/148 (69.59%), Postives = 118/148 (79.73%), Query Frame = 1
Query:    1 MLTDGSTAPDFTLLNQDSESVGLTTLRGKSVLVYFYPRADTPGCTQQACGLRDIAADIGDTVVLGISPDKPSAQLKFAQKYSLGFDLLSDPDHAVAEAFDVWQEKKNYGKTYMGIVRSAFLIGEDGKVRHAWYKISPKDTPTKLLAAL 444
            MLT GS AP  +L +Q   +V L    G+ VLV+FYPRA+TPGCTQQACGLRD+AA +GDTV++GISPDKP AQLKF +KY LG+ LL+D +HAVAEAF VW+ KKNYGK YMGI RSAFLIG DGKV H WYKISPKDTP  LL AL
Sbjct:    1 MLTPGSAAPAVSLSDQHGNTVTLKDFTGRRVLVFFYPRANTPGCTQQACGLRDVAAQVGDTVIIGISPDKPGAQLKFDEKYELGYPLLADTEHAVAEAFGVWKLKKNYGKEYMGIERSAFLIGADGKVEHTWYKISPKDTPLNLLKAL 148          
BLAST of mRNA_P-wetherbeei_contig9957.3.1 vs. uniprot
Match: A0A3C2B0S3_9ACTN (Thioredoxin-dependent thiol peroxidase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B0S3_9ACTN)

HSP 1 Score: 215 bits (548), Expect = 1.470e-69
Identity = 98/149 (65.77%), Postives = 115/149 (77.18%), Query Frame = 1
Query:    1 MLTDGSTAPDFTLLNQDSESVGLTTLRGKSVLVYFYPRADTPGCTQQACGLRDIAADIGDTVVLGISPDKPSAQLKFAQKYSLGFDLLSDPDHAVAEAFDVWQEKKNYGKTYMGIVRSAFLIGEDGKVRHAWYKISPKDTPTKLLAALA 447
            ML  G  APD  L NQ  E V L    G+ V+++FYP+A+TPGCTQQAC LRDIA  +GDTV+LGISPDKP+AQ KF  KYSLG+ LL+D +H VAE++ VWQEK NYGK YMGIVRSAFL+G DG + HAWYK+SP DTP KLL ALA
Sbjct:    1 MLAPGQPAPDIRLTNQHGEVVDLAAFSGRRVMIFFYPKANTPGCTQQACNLRDIAGQVGDTVILGISPDKPAAQKKFDDKYSLGYSLLADTEHEVAESYGVWQEKVNYGKRYMGIVRSAFLVGADGTIEHAWYKVSPADTPRKLLEALA 149          
BLAST of mRNA_P-wetherbeei_contig9957.3.1 vs. uniprot
Match: A0A6C7E7R1_ILUCY (Hydroperoxide peroxidase n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7E7R1_ILUCY)

HSP 1 Score: 215 bits (548), Expect = 1.920e-69
Identity = 104/147 (70.75%), Postives = 117/147 (79.59%), Query Frame = 1
Query:   10 DGSTAPDFTLLNQDSESVGLTTLRGKSVLVYFYPRADTPGCTQQACGLRDIAADIGDTVVLGISPDKPSAQLKFAQKYSLGFDLLSDPDHAVAEAFDVWQEKKNYGKTYMGIVRSAFLIGEDGKVRHAWYKISPKDTPTKLLAALAE 450
            +G  AP FTLL+Q+   V L+ L G+  LVYFYPRA TPGCT QACGLRDIA +IGDTV+LGISPDKP++  KF  KY LGF LLSD DHA+AE + VW EKKNYGKTYMG+ RSAFL+ EDGKV  AW KISPKDTPT LLAALAE
Sbjct:   10 EGKKAPAFTLLDQNETKVQLSKLAGRKRLVYFYPRASTPGCTTQACGLRDIAGEIGDTVILGISPDKPASLKKFDDKYDLGFTLLSDLDHAIAEKYGVWVEKKNYGKTYMGVQRSAFLLDEDGKVIKAWPKISPKDTPTNLLAALAE 156          
BLAST of mRNA_P-wetherbeei_contig9957.3.1 vs. uniprot
Match: A0A6N7FLR6_9ACTN (Thioredoxin-dependent thiol peroxidase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N7FLR6_9ACTN)

HSP 1 Score: 214 bits (545), Expect = 4.810e-69
Identity = 102/148 (68.92%), Postives = 114/148 (77.03%), Query Frame = 1
Query:    4 LTDGSTAPDFTLLNQDSESVGLTTLRGKSVLVYFYPRADTPGCTQQACGLRDIAADIGDTVVLGISPDKPSAQLKFAQKYSLGFDLLSDPDHAVAEAFDVWQEKKNYGKTYMGIVRSAFLIGEDGKVRHAWYKISPKDTPTKLLAALA 447
            L  G  AP F+LL+QD   V L    G+ VLVYFYPRADTPGCT QACGLRD+  D+GD  VLGISPDKP+AQ +F QKY LGF LLSDPD AVA+AF  + EKK YGK  MGI+RSAFL+GEDG +   WYKISPKDTPTKLLAALA
Sbjct:    5 LEPGQPAPAFSLLDQDGNEVSLQGFAGRKVLVYFYPRADTPGCTTQACGLRDVLGDLGDVAVLGISPDKPAAQKRFDQKYGLGFPLLSDPDKAVAQAFGAFGEKKMYGKVTMGIIRSAFLVGEDGNLEQTWYKISPKDTPTKLLAALA 152          
BLAST of mRNA_P-wetherbeei_contig9957.3.1 vs. uniprot
Match: UPI000E35662E (thioredoxin-dependent thiol peroxidase n=1 Tax=Desertimonas flava TaxID=2064846 RepID=UPI000E35662E)

HSP 1 Score: 213 bits (541), Expect = 1.830e-68
Identity = 100/148 (67.57%), Postives = 116/148 (78.38%), Query Frame = 1
Query:    4 LTDGSTAPDFTLLNQDSESVGLTTLRGKSVLVYFYPRADTPGCTQQACGLRDIAADIGDTVVLGISPDKPSAQLKFAQKYSLGFDLLSDPDHAVAEAFDVWQEKKNYGKTYMGIVRSAFLIGEDGKVRHAWYKISPKDTPTKLLAALA 447
            L+ G  AP   LL+Q    V L++ +G+ VLVYFYP+ADTPGCT Q+C LRD+  +IGDT VLGISPD P+ QLKF +KYSLGF LLSD DHAVAEA+ VW EKKNYG+TYMGI+RSAFLI E GK+   WYKISP DTP KLLAALA
Sbjct:    3 LSPGDKAPAINLLDQHENKVKLSSFKGRKVLVYFYPKADTPGCTTQSCALRDVLGEIGDTAVLGISPDLPAKQLKFDEKYSLGFPLLSDADHAVAEAYGVWGEKKNYGRTYMGIIRSAFLIDEKGKLAEVWYKISPADTPKKLLAALA 150          
BLAST of mRNA_P-wetherbeei_contig9957.3.1 vs. uniprot
Match: A0A7W1CM90_9ACTN (Thioredoxin-dependent thiol peroxidase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1CM90_9ACTN)

HSP 1 Score: 212 bits (540), Expect = 2.510e-68
Identity = 102/149 (68.46%), Postives = 115/149 (77.18%), Query Frame = 1
Query:    1 MLTDGSTAPDFTLLNQDSESVGLTTLRGKSVLVYFYPRADTPGCTQQACGLRDIAADIGDTVVLGISPDKPSAQLKFAQKYSLGFDLLSDPDHAVAEAFDVWQEKKNYGKTYMGIVRSAFLIGEDGKVRHAWYKISPKDTPTKLLAALA 447
            MLT G  APDF LL+Q  + V L  LRG++VLVYFYPRADTPGCT QACGL +I  DIG+T VLGISPD P+ Q KFA KYSLGF LL+D DHAVAEAF VW+EK  YG+TYMGI RSAFLI  DG VR AWY +   DTP KL+AAL+
Sbjct:    1 MLTPGDEAPDFELLDQHEQIVSLRALRGRNVLVYFYPRADTPGCTTQACGLNEILGDIGETAVLGISPDNPANQRKFADKYSLGFPLLADIDHAVAEAFGVWKEKSMYGRTYMGIERSAFLIDPDGMVREAWYNVKAADTPMKLVAALS 149          
BLAST of mRNA_P-wetherbeei_contig9957.3.1 vs. uniprot
Match: A0A538D2U5_9ACTN (Thioredoxin-dependent thiol peroxidase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538D2U5_9ACTN)

HSP 1 Score: 211 bits (537), Expect = 8.770e-68
Identity = 97/149 (65.10%), Postives = 115/149 (77.18%), Query Frame = 1
Query:    1 MLTDGSTAPDFTLLNQDSESVGLTTLRGKSVLVYFYPRADTPGCTQQACGLRDIAADIGDTVVLGISPDKPSAQLKFAQKYSLGFDLLSDPDHAVAEAFDVWQEKKNYGKTYMGIVRSAFLIGEDGKVRHAWYKISPKDTPTKLLAALA 447
            +L  G  AP F L +Q  ++V L++ +G+ V+++FYP+ADTPGCT QACGLRD+A D+GDT +LGISPD P  Q KF  KYSLGF LLSDPDHAVAEAF VW EKK YGK YMGIVRSAFL+ E GK+   WYK+SPKDTP  LL ALA
Sbjct:    6 VLKAGDKAPAFALKDQSGKTVKLSSYKGRKVMIFFYPKADTPGCTAQACGLRDVAGDVGDTAILGISPDLPEKQKKFDTKYSLGFPLLSDPDHAVAEAFGVWGEKKLYGKAYMGIVRSAFLVDESGKLSEVWYKVSPKDTPKNLLTALA 154          
BLAST of mRNA_P-wetherbeei_contig9957.3.1 vs. uniprot
Match: A0A6I2XDZ2_9ACTN (Thioredoxin-dependent thiol peroxidase n=2 Tax=root TaxID=1 RepID=A0A6I2XDZ2_9ACTN)

HSP 1 Score: 210 bits (534), Expect = 2.680e-67
Identity = 100/149 (67.11%), Postives = 114/149 (76.51%), Query Frame = 1
Query:    4 LTDGSTAPDFTLLNQDSESVGLTTLRGKSVLVYFYPRADTPGCTQQACGLRDIAADIGDTVVLGISPDKPSAQLKFAQKYSLGFDLLSDPDHAVAEAFDVWQEKKNYGKTYMGIVRSAFLIGEDGKVRHAWYKISPKDTPTKLLAALAE 450
            LT GS AP   LL+Q+ ++V  T  +G+ VLVYFYP+ADTPGCT Q+CGLRDIA  +GDTV++GISPD P+   KF  KYSLGF LLSD +H VAEAF VW EK  YGK YMGIVRSAFLI E GK+   WYKISPKDTP  LLAALAE
Sbjct:   10 LTPGSKAPSIKLLDQNGDTVSHTEFKGRKVLVYFYPKADTPGCTTQSCGLRDIADQVGDTVIIGISPDLPAKLKKFDDKYSLGFTLLSDSEHTVAEAFGVWAEKSMYGKKYMGIVRSAFLIDEKGKLEQVWYKISPKDTPANLLAALAE 158          
BLAST of mRNA_P-wetherbeei_contig9957.3.1 vs. uniprot
Match: A0A7W1UTL9_9ACTN (Thioredoxin-dependent thiol peroxidase n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1UTL9_9ACTN)

HSP 1 Score: 209 bits (533), Expect = 3.130e-67
Identity = 100/149 (67.11%), Postives = 116/149 (77.85%), Query Frame = 1
Query:    1 MLTDGSTAPDFTLLNQDSESVGLTTLRGKSVLVYFYPRADTPGCTQQACGLRDIAADIGDTVVLGISPDKPSAQLKFAQKYSLGFDLLSDPDHAVAEAFDVWQEKKNYGKTYMGIVRSAFLIGEDGKVRHAWYKISPKDTPTKLLAALA 447
            M + G  AP+F+LL+Q  ++  LT L G+ VL+YFYP+ADTPGCT QACGLRDIAA+IGDTVVLGISPDKP+   KF  KYSLGF LLSDPDH +AE + VW EK  Y +TYMGI RSAFLI E G++  AW KISPKDTPT LL ALA
Sbjct:    1 MPSSGDRAPEFSLLDQRGDTTKLTDLAGRKVLLYFYPKADTPGCTTQACGLRDIAAEIGDTVVLGISPDKPARLAKFDDKYSLGFTLLSDPDHEMAEQYGVWTEKSMYARTYMGIQRSAFLIDERGRIEQAWPKISPKDTPTNLLTALA 149          
BLAST of mRNA_P-wetherbeei_contig9957.3.1 vs. uniprot
Match: UPI001C6295A0 (thioredoxin-dependent thiol peroxidase n=1 Tax=Iamia sp. SCSIO 61187 TaxID=2722752 RepID=UPI001C6295A0)

HSP 1 Score: 209 bits (531), Expect = 6.730e-67
Identity = 96/144 (66.67%), Postives = 112/144 (77.78%), Query Frame = 1
Query:   13 GSTAPDFTLLNQDSESVGLTTLRGKSVLVYFYPRADTPGCTQQACGLRDIAADIGDTVVLGISPDKPSAQLKFAQKYSLGFDLLSDPDHAVAEAFDVWQEKKNYGKTYMGIVRSAFLIGEDGKVRHAWYKISPKDTPTKLLAAL 444
            G  AP  TLL+Q+ E V L    G  VLVYFYP+ADTPGCT Q+CGLRD+A DIGDT ++GISPD P+   +F +KY LGF LLSDPDH VAE + VW EKKNYG+TYMGI+RSAFL+G DG++  AW KISPKDTPTKLL AL
Sbjct:    7 GKKAPPITLLDQNGEKVKLADHAGHPVLVYFYPKADTPGCTTQSCGLRDVAGDIGDTAIIGISPDPPAKLARFDEKYGLGFTLLSDPDHVVAERYGVWGEKKNYGRTYMGIIRSAFLVGADGRIVEAWPKISPKDTPTKLLKAL 150          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9957.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I3F593_9ACTN6.480e-7169.59Thioredoxin-dependent thiol peroxidase n=2 Tax=roo... [more]
A0A3C2B0S3_9ACTN1.470e-6965.77Thioredoxin-dependent thiol peroxidase n=1 Tax=Aci... [more]
A0A6C7E7R1_ILUCY1.920e-6970.75Hydroperoxide peroxidase n=1 Tax=Ilumatobacter coc... [more]
A0A6N7FLR6_9ACTN4.810e-6968.92Thioredoxin-dependent thiol peroxidase n=1 Tax=Aci... [more]
UPI000E35662E1.830e-6867.57thioredoxin-dependent thiol peroxidase n=1 Tax=Des... [more]
A0A7W1CM90_9ACTN2.510e-6868.46Thioredoxin-dependent thiol peroxidase n=1 Tax=Aci... [more]
A0A538D2U5_9ACTN8.770e-6865.10Thioredoxin-dependent thiol peroxidase n=1 Tax=Act... [more]
A0A6I2XDZ2_9ACTN2.680e-6767.11Thioredoxin-dependent thiol peroxidase n=2 Tax=roo... [more]
A0A7W1UTL9_9ACTN3.130e-6767.11Thioredoxin-dependent thiol peroxidase n=2 Tax=Aci... [more]
UPI001C6295A06.730e-6766.67thioredoxin-dependent thiol peroxidase n=1 Tax=Iam... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9957contigP-wetherbeei_contig9957:1397..1849 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1313172.YM304_17780
PFAMsAhpC-TSA
Model size453
Max annot lvl84992|Acidimicrobiia
KEGG koko:K03564
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.14e-70
EggNOG OGsCOG1225@1|root,COG1225@2|Bacteria,2IHZ6@201174|Actinobacteria,4CN8N@84992|Acidimicrobiia
EC1.11.1.15
DescriptionRedoxin
Cds size453
COG categoryO
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187118.7838016-CDS-P-wetherbeei_contig9957:1396..18491683187118.7838016-CDS-P-wetherbeei_contig9957:1396..1849Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9957 1397..1849 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9957.3.1prot_P-wetherbeei_contig9957.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9957 1397..1849 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9957.3.1

>prot_P-wetherbeei_contig9957.3.1 ID=prot_P-wetherbeei_contig9957.3.1|Name=mRNA_P-wetherbeei_contig9957.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=151bp
MLTDGSTAPDFTLLNQDSESVGLTTLRGKSVLVYFYPRADTPGCTQQACG
LRDIAADIGDTVVLGISPDKPSAQLKFAQKYSLGFDLLSDPDHAVAEAFD
VWQEKKNYGKTYMGIVRSAFLIGEDGKVRHAWYKISPKDTPTKLLAALAE
*
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mRNA from alignment at P-wetherbeei_contig9957:1397..1849+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9957.3.1 ID=mRNA_P-wetherbeei_contig9957.3.1|Name=mRNA_P-wetherbeei_contig9957.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=453bp|location=Sequence derived from alignment at P-wetherbeei_contig9957:1397..1849+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTCACGGATGGTAGCACTGCACCGGATTTCACCTTACTGAACCAAGA CAGTGAGAGCGTCGGTCTCACCACGTTGCGTGGGAAATCGGTGTTGGTCT ACTTCTATCCACGTGCTGACACGCCCGGATGCACCCAGCAGGCCTGCGGG TTGCGCGACATCGCCGCCGACATCGGCGACACGGTCGTCCTCGGCATCAG CCCGGACAAGCCGTCGGCGCAGCTCAAGTTCGCCCAGAAGTACTCGCTCG GCTTCGATCTGCTGTCCGACCCCGATCACGCGGTGGCCGAGGCGTTCGAC GTGTGGCAGGAGAAGAAGAACTACGGCAAGACGTACATGGGGATCGTCCG CTCGGCGTTCCTGATCGGCGAGGATGGCAAGGTGCGCCACGCCTGGTACA AGATCAGCCCGAAGGACACCCCGACCAAGCTGCTTGCTGCACTGGCCGAA TGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9957:1397..1849+

>mRNA_P-wetherbeei_contig9957.3.1 ID=mRNA_P-wetherbeei_contig9957.3.1|Name=mRNA_P-wetherbeei_contig9957.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=453bp|location=Sequence derived from alignment at P-wetherbeei_contig9957:1397..1849+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTCACGGATGGTAGCACTGCACCGGATTTCACCTTACTGAACCAAGA
CAGTGAGAGCGTCGGTCTCACCACGTTGCGTGGGAAATCGGTGTTGGTCT
ACTTCTATCCACGTGCTGACACGCCCGGATGCACCCAGCAGGCCTGCGGG
TTGCGCGACATCGCCGCCGACATCGGCGACACGGTCGTCCTCGGCATCAG
CCCGGACAAGCCGTCGGCGCAGCTCAAGTTCGCCCAGAAGTACTCGCTCG
GCTTCGATCTGCTGTCCGACCCCGATCACGCGGTGGCCGAGGCGTTCGAC
GTGTGGCAGGAGAAGAAGAACTACGGCAAGACGTACATGGGGATCGTCCG
CTCGGCGTTCCTGATCGGCGAGGATGGCAAGGTGCGCCACGCCTGGTACA
AGATCAGCCCGAAGGACACCCCGACCAAGCTGCTTGCTGCACTGGCCGAA
TGA
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