mRNA_P-wetherbeei_contig9946.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9946.1.1
Unique NamemRNA_P-wetherbeei_contig9946.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig9946.1.1 vs. uniprot
Match: L1J2R5_GUITC (TPM_phosphatase domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J2R5_GUITC)

HSP 1 Score: 166 bits (419), Expect = 3.570e-48
Identity = 73/104 (70.19%), Postives = 94/104 (90.38%), Query Frame = 1 
Query:  154 PEGVNKPELLPPGPKTNIIDLERFLTRGQRDRIDRMLGALERDTGFRVRVLCQRYPQTPGLAVKDYWAVDEKTVVLVADKGSGKAGGANLLNFNVGEGLKFALP 465
            PEGVN+P+LLPPGPK N+IDLE+FLT+GQ  ++D++L  LE DTG+++RVLCQRYPQTPGLA+KDYW VD+KT+V+V D+GSGKAG AN+LNFNVG+G++ ALP
Sbjct:  108 PEGVNRPDLLPPGPKVNVIDLEKFLTKGQVAKMDKLLAKLEEDTGYKMRVLCQRYPQTPGLAIKDYWGVDDKTIVMVVDRGSGKAGQANILNFNVGQGVELALP 211
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BLAST of mRNA_P-wetherbeei_contig9946.1.1 vs. uniprot
Match: A0A7S1DXX3_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DXX3_HEMAN)

HSP 1 Score: 149 bits (376), Expect = 1.360e-41
Identity = 68/104 (65.38%), Postives = 86/104 (82.69%), Query Frame = 1 
Query:  154 PEGVNKPELLPPGPKTNIIDLERFLTRGQRDRIDRMLGALERDTGFRVRVLCQRYPQTPGLAVKDYWAVDEKTVVLVADKGSGKAGGANLLNFNVGEGLKFALP 465
            PEGVNKPELLP G K NIIDLE+FL++GQ  +ID  L  LE+DTGF+ RVLCQRYPQTPGLA+KDYW +D+K++V++ D+G+ K+G AN+LNFNVG G+   LP
Sbjct:  115 PEGVNKPELLPEGDKVNIIDLEKFLSKGQVKKIDAKLAKLEQDTGFKFRVLCQRYPQTPGLAIKDYWGLDDKSIVMIVDRGTSKSGMANILNFNVGAGVDLTLP 218
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BLAST of mRNA_P-wetherbeei_contig9946.1.1 vs. uniprot
Match: A0A7S0Q6K1_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q6K1_9EUKA)

HSP 1 Score: 147 bits (371), Expect = 1.750e-41
Identity = 70/108 (64.81%), Postives = 89/108 (82.41%), Query Frame = 1 
Query:  148 ARPEGVNKPELLPPGPKTNIIDLERFLTRGQRDRIDRMLGALERDTGFRVRVLCQRYPQTPGLAVKDYWAVDEKTVVLVADKGSGKAGGANLLNFNVGEGLKFALPNT 471
            ARPEGVNKPELLP   +TN+IDLER+LT G+   +D+ L ALE++TGF++R+LCQRYP TPGLA+KDYW +D+ ++V+VADKG+ K   AN+LNFNVGEG K  LPNT
Sbjct:   55 ARPEGVNKPELLPTE-QTNVIDLERYLTTGEVKNLDKQLAALEKETGFKLRILCQRYPNTPGLAIKDYWGLDDNSIVMVADKGT-KGNSANILNFNVGEGAKLMLPNT 160
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BLAST of mRNA_P-wetherbeei_contig9946.1.1 vs. uniprot
Match: A0A7S0YWZ2_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YWZ2_9CRYP)

HSP 1 Score: 147 bits (372), Expect = 5.270e-41
Identity = 67/104 (64.42%), Postives = 85/104 (81.73%), Query Frame = 1 
Query:  154 PEGVNKPELLPPGPKTNIIDLERFLTRGQRDRIDRMLGALERDTGFRVRVLCQRYPQTPGLAVKDYWAVDEKTVVLVADKGSGKAGGANLLNFNVGEGLKFALP 465
            PEGVNKPELLP G K NIIDLE+FL++GQ  +ID  L  LE+DTGF+ RVLCQRYPQTPGLA+KDYW +DEK++V++ D+G+ K+G +N+LNFNVG  +   LP
Sbjct:  114 PEGVNKPELLPEGEKVNIIDLEKFLSKGQAKKIDAKLAKLEQDTGFKFRVLCQRYPQTPGLAIKDYWGLDEKSIVMIVDRGTSKSGMSNILNFNVGPAVDLTLP 217
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BLAST of mRNA_P-wetherbeei_contig9946.1.1 vs. uniprot
Match: R1DRQ1_EMIHU (TPM_phosphatase domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DRQ1_EMIHU)

HSP 1 Score: 145 bits (367), Expect = 7.000e-41
Identity = 68/108 (62.96%), Postives = 87/108 (80.56%), Query Frame = 1 
Query:  148 ARPEGVNKPELLPPGPKTNIIDLERFLTRGQRDRIDRMLGALERDTGFRVRVLCQRYPQTPGLAVKDYWAVDEKTVVLVADKGSGKAGGANLLNFNVGEGLKFALPNT 471
            ARPEGVNKPELLP GP   +IDL++FLT G+R ++D  L  +E +TGF++RVLCQ+YP TPGLA+KDYW +D+K++VLVADKG+   G +N+LNFNV EG K  LPNT
Sbjct:   32 ARPEGVNKPELLPTGPVQRVIDLQKFLTSGERTKMDTQLAKIEAETGFKLRVLCQQYPNTPGLAIKDYWGLDDKSIVLVADKGT--KGTSNMLNFNVAEGAKLQLPNT 137
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BLAST of mRNA_P-wetherbeei_contig9946.1.1 vs. uniprot
Match: A0A836CHD3_9STRA (Thylakoid lumen 15.0 kDa protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHD3_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.340e-40
Identity = 70/107 (65.42%), Postives = 85/107 (79.44%), Query Frame = 1 
Query:  148 ARPEGVNKPELLPPGPKTNIIDLERFLTRGQRDRIDRMLGALERDTGFRVRVLCQRYPQTPGLAVKDYWAVDEKTVVLVADKGSGKAGGANLLNFNVGEGLKFALPN 468
            ARPEGVNKPELLP GPK  +IDL  +LT GQ  R+   +  +E+DTG +VR+L QRYPQTPG A+KDYW VD+K++VL+AD+G+   G ANLLNFNVGEGLKF LPN
Sbjct:   80 ARPEGVNKPELLPKGPKVEVIDLMNYLTSGQEKRLTNTVQRIEKDTGVKVRILTQRYPQTPGYAIKDYWNVDDKSIVLIADRGA--KGTANLLNFNVGEGLKFQLPN 184
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BLAST of mRNA_P-wetherbeei_contig9946.1.1 vs. uniprot
Match: A0A7S4JNH9_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4JNH9_9EUKA)

HSP 1 Score: 140 bits (352), Expect = 1.580e-38
Identity = 68/108 (62.96%), Postives = 86/108 (79.63%), Query Frame = 1 
Query:  148 ARPEGVNKPELLPPGPKTNIIDLERFLTRGQRDRIDRMLGALERDTGFRVRVLCQRYPQTPGLAVKDYWAVDEKTVVLVADKGSGKAGG-ANLLNFNVGEGLKFALPN 468
            ARPEGVNKPELLP   +TN+IDL+RFLT GQ   +D+ L  LE+ TG ++RVLCQ YP TPGLA+KDYW +D++++VLV DKG  K GG AN+LNFNV +G+K +LPN
Sbjct:   35 ARPEGVNKPELLP-SYQTNVIDLQRFLTSGQVKAMDKQLADLEKATGIKLRVLCQSYPNTPGLAIKDYWGLDDRSIVLVVDKGQSKGGGVANILNFNVADGIKLSLPN 141
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BLAST of mRNA_P-wetherbeei_contig9946.1.1 vs. uniprot
Match: A0A6V1T667_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T667_HETAK)

HSP 1 Score: 139 bits (349), Expect = 5.260e-38
Identity = 70/110 (63.64%), Postives = 86/110 (78.18%), Query Frame = 1 
Query:  148 ARPEGVNKPELLPPGPKTNIIDLERFLTRGQRDRIDRMLGALERDTGFRVRVLCQRYPQTPGLAVKDYWAVDEKTVVLVADKGS----GKAGGANLLNFNVGEGLKFALP 465
            ARPEGVNKPELLP   +TN+ID  + LT+GQ  R+D++L  LE+DTG+++RVLCQ YP TPGLA++D+W VDEKTVVLVAD+G+       G ANLLNFNVG GL  ALP
Sbjct:   72 ARPEGVNKPELLP-SEQTNVIDTVKMLTKGQVGRLDKLLAKLEKDTGYKLRVLCQSYPNTPGLAIRDFWGVDEKTVVLVADEGTFGRNAARGPANLLNFNVGSGLDLALP 180
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BLAST of mRNA_P-wetherbeei_contig9946.1.1 vs. uniprot
Match: A0A4D9CVD4_9STRA (TPM_phosphatase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVD4_9STRA)

HSP 1 Score: 137 bits (346), Expect = 5.690e-38
Identity = 68/109 (62.39%), Postives = 86/109 (78.90%), Query Frame = 1 
Query:  148 ARPEGVNKPELLPPGPKTNIIDLERFLTRGQRDRIDRMLGALERDTGFRVRVLCQRYPQTPGLAVKDYWAVDEKTVVLVADKGSG---KAGGANLLNFNVGEGLKFALP 465
            ARPEGVNKPELLP   ++N+IDLERFLT GQ+ R+ + L ALE+D+G +VR+LCQRYP TPGLA+KDYW +D+K++V+VADKG     +    NLLNFNVG GL+  LP
Sbjct:   35 ARPEGVNKPELLPKE-RSNVIDLERFLTSGQKKRLSQQLDALEKDSGIKVRLLCQRYPDTPGLAIKDYWGLDDKSIVVVADKGPANIKQVATRNLLNFNVGSGLQLLLP 142
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BLAST of mRNA_P-wetherbeei_contig9946.1.1 vs. uniprot
Match: A0A7S2N2M5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N2M5_9STRA)

HSP 1 Score: 134 bits (337), Expect = 5.190e-37
Identity = 68/110 (61.82%), Postives = 84/110 (76.36%), Query Frame = 1 
Query:  157 EGVNKPELLPPGPKTNIIDLERFLTRGQRDRIDRMLGALERDTGFRVRVLCQRYPQTPGLAVKDYWAV------DEKTVVLVADKGSGKAGGANLLNFNVGEGLKFALPN 468
            E VN+P+LLP  P  N+I +++FLT GQ  R+D++L ALERDTGFRVRVLCQ YPQTPGLAV+DYW +      D+K +VLV D+  GK    N+LNFNVGEG+KFALPN
Sbjct:    6 EAVNRPDLLPSEPGQNVIQIQKFLTTGQATRMDKLLTALERDTGFRVRVLCQAYPQTPGLAVRDYWDLGKEGQKDDKYIVLVVDQFGGKG---NVLNFNVGEGVKFALPN 112
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9946.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
L1J2R5_GUITC3.570e-4870.19TPM_phosphatase domain-containing protein n=2 Tax=... [more]
A0A7S1DXX3_HEMAN1.360e-4165.38Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S0Q6K1_9EUKA1.750e-4164.81Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S0YWZ2_9CRYP5.270e-4164.42Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
R1DRQ1_EMIHU7.000e-4162.96TPM_phosphatase domain-containing protein n=2 Tax=... [more]
A0A836CHD3_9STRA1.340e-4065.42Thylakoid lumen 15.0 kDa protein n=1 Tax=Tribonema... [more]
A0A7S4JNH9_9EUKA1.580e-3862.96Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A6V1T667_HETAK5.260e-3863.64Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9CVD4_9STRA5.690e-3862.39TPM_phosphatase domain-containing protein n=1 Tax=... [more]
A0A7S2N2M5_9STRA5.190e-3761.82Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9946contigP-wetherbeei_contig9946:1156..2133 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog55529.EKX42617
PFAMsTPM_phosphatase
Model size492
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0009579,GO:0031977,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044436,GO:0044444,GO:0044464
Exons2
Evalue5.85e-49
EggNOG OGs28NXC@1|root,2QVHQ@2759|Eukaryota
Cds size492
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187118.2818284-CDS-P-wetherbeei_contig9946:1155..14131683187118.2818284-CDS-P-wetherbeei_contig9946:1155..1413Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9946 1156..1413 +
1683187118.2923064-CDS-P-wetherbeei_contig9946:1899..21331683187118.2923064-CDS-P-wetherbeei_contig9946:1899..2133Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9946 1900..2133 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9946.1.1prot_P-wetherbeei_contig9946.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9946 1156..2133 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9946.1.1

>prot_P-wetherbeei_contig9946.1.1 ID=prot_P-wetherbeei_contig9946.1.1|Name=mRNA_P-wetherbeei_contig9946.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=164bp
RPSTHKQDGSVSKPSTRREALASAFGSGGAVAAVAVALAATAASPAPASA
RPEGVNKPELLPPGPKTNIIDLERFLTRGQRDRIDRMLGALERDTGFRVR
VLCQRYPQTPGLAVKDYWAVDEKTVVLVADKGSGKAGGANLLNFNVGEGL
KFALPNTVSLALG*
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mRNA from alignment at P-wetherbeei_contig9946:1156..2133+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9946.1.1 ID=mRNA_P-wetherbeei_contig9946.1.1|Name=mRNA_P-wetherbeei_contig9946.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=978bp|location=Sequence derived from alignment at P-wetherbeei_contig9946:1156..2133+ (Phaeothamnion wetherbeei SAG_119_79)
CGTCCCTCTACACACAAGCAGGATGGATCAGTGAGTAAACCCTCCACACG
GCGAGAGGCCCTGGCGAGCGCATTCGGCAGTGGGGGCGCAGTCGCCGCCG
TCGCCGTCGCGCTTGCGGCAACTGCGGCCTCGCCGGCGCCGGCGTCGGCC
CGTCCGGAAGGAGTTAACAAGCCGGAGCTGCTGCCGCCGGGGCCCAAAAC
AAACATCATCGACCTGGAGCGGTTCCTGACGAGGGGGCAGCGGGACCGGA
TTGACAGGGTGAGTCAGTCGTGGAGAGAGGTGGGGAAACGAGAGATCTGC
GCAGCATCGGCAGCGACTGGATTTGGTAATGCGGCTGCTTTCCGCTAGTT
TGCTTGACCAGAACGAAGAAAGGTGAGAGGAATGACGCGCGAGCGGTGGG
CACGGAGCAGCAGCCAAGCTCGCTGTCTGCAAGAAGGAGCGGCTGCCGCT
CTGCCGGGACCGCCTCCCTTTTTTAAATTCATGTTTTACTGTTGTGCGCA
GTCGTCTGGTACATCTTTTGGCCTCATTGACCCGAGCTTCGTGTGCTAGA
GCGCCTTCCTCGGTCTTCCATGCCAGGAGAGAATGAACCCGGCTAAGAAG
CCTGAAGCTATCGTCCCGACTCAGTTTCCAAAGTGTCGGTCTGCTCGCCT
TCGTGTTGCGCCCCTAGCATGCCTCTCTGCGTTCCAACATAAACCTGCTT
CTGCCCCTCCTAAGAATTCCCTTCCAAAAAACAAAATACAACAGATGCTG
GGCGCCCTGGAGCGCGATACGGGGTTCCGCGTGCGCGTGCTCTGCCAACG
CTACCCGCAGACGCCGGGCCTCGCCGTGAAGGACTACTGGGCCGTGGACG
AAAAGACCGTTGTTTTGGTGGCCGACAAAGGCAGCGGCAAGGCTGGCGGG
GCCAACCTCCTCAACTTCAACGTTGGGGAGGGGCTCAAGTTCGCACTGCC
CAACACGGTCAGTCTTGCTCTAGGGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9946:1156..2133+

>mRNA_P-wetherbeei_contig9946.1.1 ID=mRNA_P-wetherbeei_contig9946.1.1|Name=mRNA_P-wetherbeei_contig9946.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=492bp|location=Sequence derived from alignment at P-wetherbeei_contig9946:1156..2133+ (Phaeothamnion wetherbeei SAG_119_79)
CGTCCCTCTACACACAAGCAGGATGGATCAGTGAGTAAACCCTCCACACG
GCGAGAGGCCCTGGCGAGCGCATTCGGCAGTGGGGGCGCAGTCGCCGCCG
TCGCCGTCGCGCTTGCGGCAACTGCGGCCTCGCCGGCGCCGGCGTCGGCC
CGTCCGGAAGGAGTTAACAAGCCGGAGCTGCTGCCGCCGGGGCCCAAAAC
AAACATCATCGACCTGGAGCGGTTCCTGACGAGGGGGCAGCGGGACCGGA
TTGACAGGATGCTGGGCGCCCTGGAGCGCGATACGGGGTTCCGCGTGCGC
GTGCTCTGCCAACGCTACCCGCAGACGCCGGGCCTCGCCGTGAAGGACTA
CTGGGCCGTGGACGAAAAGACCGTTGTTTTGGTGGCCGACAAAGGCAGCG
GCAAGGCTGGCGGGGCCAACCTCCTCAACTTCAACGTTGGGGAGGGGCTC
AAGTTCGCACTGCCCAACACGGTCAGTCTTGCTCTAGGGTAG
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