prot_P-wetherbeei_contig9938.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig9938.3.1
Unique Nameprot_P-wetherbeei_contig9938.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length71
Homology
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BLAST of mRNA_P-wetherbeei_contig9938.3.1 vs. uniprot
Match: A0A7X8XKX1_9BURK (DNA polymerase III subunit delta n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XKX1_9BURK)

HSP 1 Score: 82.0 bits (201), Expect = 7.070e-17
Identity = 38/71 (53.52%), Postives = 52/71 (73.24%), Query Frame = 0 
Query:    1 KLPESLLYHVTGPDDYLREEVLARLKRELLDPDFGDFNFRSVRCASNLKLSLLQDALAELPVMTDRRVLEL 71
            +LPE+ L+ + GPDD+LRE+VL RL+ E+LDP F DFN   + C S  K + +  AL ELP+MTDRR++EL
Sbjct:    8 RLPEASLFLLAGPDDFLREQVLNRLRHEVLDPGFADFNHCRIHCTSGTKSATILAALFELPMMTDRRLVEL 78
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BLAST of mRNA_P-wetherbeei_contig9938.3.1 vs. uniprot
Match: A0A355TQL0_9BACT (DNA polymerase III subunit delta (Fragment) n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TQL0_9BACT)

HSP 1 Score: 68.2 bits (165), Expect = 8.150e-12
Identity = 30/71 (42.25%), Postives = 49/71 (69.01%), Query Frame = 0 
Query:    1 KLPESLLYHVTGPDDYLREEVLARLKRELLDPDFGDFNFRSVRCASNLKLSLLQDALAELPVMTDRRVLEL 71
            K+ E+  Y + G D+YL  E +  L+  ++D DFGDFN+  + C+ + K++ L +AL ELP++TD+R+LEL
Sbjct:   10 KIKEATAYILYGEDEYLISETMHLLRNSVIDADFGDFNYTRLECSGSTKVAELVNALRELPMLTDKRLLEL 80
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9938.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7X8XKX1_9BURK7.070e-1753.52DNA polymerase III subunit delta n=1 Tax=Burkholde... [more]
A0A355TQL0_9BACT8.150e-1242.25DNA polymerase III subunit delta (Fragment) n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 4..71
e-value: 7.0E-11
score: 44.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9938contigP-wetherbeei_contig9938:2191..2403 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9938.3.1mRNA_P-wetherbeei_contig9938.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig9938 2191..2403 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig9938.3.1 ID=prot_P-wetherbeei_contig9938.3.1|Name=mRNA_P-wetherbeei_contig9938.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=71bp
KLPESLLYHVTGPDDYLREEVLARLKRELLDPDFGDFNFRSVRCASNLKL
SLLQDALAELPVMTDRRVLEL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase