mRNA_P-wetherbeei_contig9934.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9934.2.1
Unique NamemRNA_P-wetherbeei_contig9934.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9934.2.1 vs. uniprot
Match: A0A346A0S6_9HYPH (ABC transporter permease n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A346A0S6_9HYPH)

HSP 1 Score: 388 bits (996), Expect = 4.300e-134
Identity = 209/259 (80.69%), Postives = 236/259 (91.12%), Query Frame = 1
Query:   28 DDRALRVAIPLAMLALVVLTWDLAVRGFAIPPYVLPSPGLVAATLVNDAPLLWQSLLVTLAITFEGFLLAALGGVAVAVAFNQWRIAEYALYPYAVILQVTPVVAVAPLLLIYLPQPLAVLACAWIVAFFPVLANTTLGLNSVDHNLVALFQLYKASRWQILLHLKLPAALPQMLAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLACRIAESGYRLNISRMFAALLLLALAGVAIFFVLSALSHVLLRRWHESAVRQER 804
             +RALR+ +P+ +LA+++L WDL VRGFAIPPYVLP PGLV +TL+ DA LL+QSLLVTL +T EGF+LAA+GGV  AV FNQWR  EY+ YPYAVILQVTP+VA+APLLLIYLPQ LAVLACAWIVAFFPVLANTTLGLNSVDHNL+ALF+LYKASRW+IL  LKLPAALPQMLAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLA RIAESGYRLNI RMFAAL+LL+LAGV IFFVLSA+S+V+LRRWHESA+R+ER
Sbjct:    2 SERALRIGLPILVLAVLLLAWDLIVRGFAIPPYVLPGPGLVLSTLIADAGLLFQSLLVTLTLTIEGFVLAAVGGVMWAVVFNQWRAVEYSFYPYAVILQVTPIVAIAPLLLIYLPQHLAVLACAWIVAFFPVLANTTLGLNSVDHNLLALFELYKASRWEILWRLKLPAALPQMLAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLAYRIAESGYRLNIPRMFAALVLLSLAGVVIFFVLSAVSYVVLRRWHESAIRRER 260          
BLAST of mRNA_P-wetherbeei_contig9934.2.1 vs. uniprot
Match: A0A0Q7TAC8_9HYPH (ABC transporter ATP-binding protein n=1 Tax=Pseudolabrys sp. Root1462 TaxID=1736466 RepID=A0A0Q7TAC8_9HYPH)

HSP 1 Score: 366 bits (939), Expect = 2.030e-125
Identity = 199/258 (77.13%), Postives = 224/258 (86.82%), Query Frame = 1
Query:   28 DDRALRVAIPLAMLALVVLTWDLAVRGFAIPPYVLPSPGLVAATLVNDAPLLWQSLLVTLAITFEGFLLAALGGVAVAVAFNQWRIAEYALYPYAVILQVTPVVAVAPLLLIYLPQPLAVLACAWIVAFFPVLANTTLGLNSVDHNLVALFQLYKASRWQILLHLKLPAALPQMLAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLACRIAESGYRLNISRMFAALLLLALAGVAIFFVLSALSHVLLRRWHESAVRQE 801
              R LR+ +P  +LA+VV+ W+  VR FAIP YVLPSP LV   L++D  LL+ SLLVTL +TFEGF+LAA+GG+ +A+AFNQWR+ EY+ YPYAVILQVTPVVAVAPLLLIYLPQ LAVLACAWIVAFFPVLANTTLGLNSVD NL+ALF LYKASRWQ+L+ LKLPAALPQ+L GLRIAGGLSLIGAVVAEIAAGSAGAGSGLA RIAESGYRLNI RMFAALLLL+L GVAIF  LSALSH++LRRWHES +R E
Sbjct:    2 SGRVLRLVLPALLLAIVVVVWEATVRFFAIPAYVLPSPALVFGALIDDRALLFNSLLVTLGLTFEGFMLAAVGGIVLAMAFNQWRLIEYSFYPYAVILQVTPVVAVAPLLLIYLPQHLAVLACAWIVAFFPVLANTTLGLNSVDRNLMALFDLYKASRWQVLMRLKLPAALPQILTGLRIAGGLSLIGAVVAEIAAGSAGAGSGLAYRIAESGYRLNIPRMFAALLLLSLVGVAIFLALSALSHLVLRRWHESELRAE 259          
BLAST of mRNA_P-wetherbeei_contig9934.2.1 vs. uniprot
Match: UPI0010BF3CB0 (ABC transporter permease n=1 Tax=Pseudolabrys sp. FHR47 TaxID=2562284 RepID=UPI0010BF3CB0)

HSP 1 Score: 365 bits (937), Expect = 4.230e-125
Identity = 196/253 (77.47%), Postives = 221/253 (87.35%), Query Frame = 1
Query:   43 RVAIPLAMLALVVLTWDLAVRGFAIPPYVLPSPGLVAATLVNDAPLLWQSLLVTLAITFEGFLLAALGGVAVAVAFNQWRIAEYALYPYAVILQVTPVVAVAPLLLIYLPQPLAVLACAWIVAFFPVLANTTLGLNSVDHNLVALFQLYKASRWQILLHLKLPAALPQMLAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLACRIAESGYRLNISRMFAALLLLALAGVAIFFVLSALSHVLLRRWHESAVRQE 801
            R+A+P+ +LA+ V  WD AVR FAIPPY+LP PG+VA +L+ D  LL+ SLLVTL +  EGF LA +GG+  A  FNQWR+ EY+ YPYAV+LQVTPVVA+APLLLIYLPQ LAVLACAWIVAFFPVLANTTLGL SVD NLVALFQLYKASRWQ+L+ LKLPAALPQML GLRIAGGLSLIGAVVAEIAAGSAGAGSGLA RIAESGYRLNI RMFAALLLL+LAGVAI+FVLS+LSH++LRRWHES V +E
Sbjct:    8 RIALPILLLAIAVAVWDAAVRAFAIPPYILPGPGIVAESLIGDRGLLFGSLLVTLTLALEGFALAVIGGIFWATVFNQWRLVEYSFYPYAVVLQVTPVVAIAPLLLIYLPQHLAVLACAWIVAFFPVLANTTLGLRSVDRNLVALFQLYKASRWQVLMRLKLPAALPQMLTGLRIAGGLSLIGAVVAEIAAGSAGAGSGLAYRIAESGYRLNIPRMFAALLLLSLAGVAIYFVLSSLSHLVLRRWHESEVDEE 260          
BLAST of mRNA_P-wetherbeei_contig9934.2.1 vs. uniprot
Match: A0A371BAJ8_9HYPH (ABC transporter permease n=1 Tax=Pseudolabrys sp. GY_H TaxID=2292256 RepID=A0A371BAJ8_9HYPH)

HSP 1 Score: 361 bits (927), Expect = 1.410e-123
Identity = 197/259 (76.06%), Postives = 222/259 (85.71%), Query Frame = 1
Query:   28 DDRALRVAIPLAMLALVVLTWDLAVRGFAIPPYVLPSPGLVAATLVNDAPLLWQSLLVTLAITFEGFLLAALGGVAVAVAFNQWRIAEYALYPYAVILQVTPVVAVAPLLLIYLPQPLAVLACAWIVAFFPVLANTTLGLNSVDHNLVALFQLYKASRWQILLHLKLPAALPQMLAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLACRIAESGYRLNISRMFAALLLLALAGVAIFFVLSALSHVLLRRWHESAVRQER 804
            +   +R  +P+ +LA  +  WD+AVR FAIPPYVLP PGLVA  L+ D  LL+ SL+VTL +  EGF LAA+GG+  AV FNQWR+ EY+ YPYAV+LQVTPVVA+APLLLIYLPQ LAVLACAWIVAFFPVLANTTLGL SVD NLVALF LYKASRWQ+L+ L LPAALPQ+LAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLA RIAESGYRLNI RMFAALLLL+LAGVAIF VLSALSH++LRRWHES V++ER
Sbjct:    3 ESGLVRTVLPVLLLAGAIAAWDMAVRVFAIPPYVLPGPGLVAGALIGDRGLLFDSLVVTLTLAIEGFALAAIGGIFWAVVFNQWRVVEYSFYPYAVVLQVTPVVAIAPLLLIYLPQHLAVLACAWIVAFFPVLANTTLGLRSVDRNLVALFALYKASRWQVLVRLMLPAALPQILAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLAYRIAESGYRLNIPRMFAALLLLSLAGVAIFAVLSALSHLVLRRWHESEVKEER 261          
BLAST of mRNA_P-wetherbeei_contig9934.2.1 vs. uniprot
Match: A0A127F4N4_9HYPH (Nitrate/sulfonate/bicarbonate ABC transporter permease n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127F4N4_9HYPH)

HSP 1 Score: 349 bits (895), Expect = 1.000e-118
Identity = 190/258 (73.64%), Postives = 219/258 (84.88%), Query Frame = 1
Query:   28 DDRALRVAIPLAMLALVVLTWDLAVRGFAIPPYVLPSPGLVAATLVNDAPLLWQSLLVTLAITFEGFLLAALGGVAVAVAFNQWRIAEYALYPYAVILQVTPVVAVAPLLLIYLPQPLAVLACAWIVAFFPVLANTTLGLNSVDHNLVALFQLYKASRWQILLHLKLPAALPQMLAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLACRIAESGYRLNISRMFAALLLLALAGVAIFFVLSALSHVLLRRWHESAVRQE 801
            ++RAL +A P  +L L V+ WDL VR   IPPY+LP+PGLV +TLV+D  +LW SLL TL  T EG +LA  GG+ +A+ FNQ R+ E++LYPYAVILQVTPVVA+APLLLIYLPQ  AVLACAWIVAFFPVLANTTLGLNSVDHNL  LF++Y ASRWQ+L  LKLPAALPQMLAG+RIAGGLSLIGAVVAEIAAGSAGAGSGLA RIAESGYRLNI RMFAALLLL++AG+AIF +LS L+HV LRRWHESA+ +E
Sbjct:    2 NERALSIAAPAGVLILSVVVWDLVVRINGIPPYILPAPGLVLSTLVSDWSILWSSLLATLTTTVEGLVLAVAGGIGLAILFNQSRLLEHSLYPYAVILQVTPVVAIAPLLLIYLPQQAAVLACAWIVAFFPVLANTTLGLNSVDHNLADLFRMYGASRWQVLWELKLPAALPQMLAGIRIAGGLSLIGAVVAEIAAGSAGAGSGLAFRIAESGYRLNIPRMFAALLLLSIAGIAIFAMLSMLNHVALRRWHESAIARE 259          
BLAST of mRNA_P-wetherbeei_contig9934.2.1 vs. uniprot
Match: A0A537NX70_9PROT (ABC transporter permease n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NX70_9PROT)

HSP 1 Score: 349 bits (895), Expect = 1.520e-118
Identity = 192/260 (73.85%), Postives = 221/260 (85.00%), Query Frame = 1
Query:   22 PTDDRALRVAIPLAMLALVVLTWDLAVRGFAIPPYVLPSPGLVAATLVNDAPLLWQSLLVTLAITFEGFLLAALGGVAVAVAFNQWRIAEYALYPYAVILQVTPVVAVAPLLLIYLPQPLAVLACAWIVAFFPVLANTTLGLNSVDHNLVALFQLYKASRWQILLHLKLPAALPQMLAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLACRIAESGYRLNISRMFAALLLLALAGVAIFFVLSALSHVLLRRWHESAVRQE 801
            P  DR LRV +P+A+LAL VL W+L VR   IPPYVLP+P LV +TL++D  +L  SLLVTL  T EGFLLAA+GG+ +AV FNQ R+ EY+LYPYA+ILQVTP+VA+APLLL+YLPQP AVLACAWIVAFFPVLANTTLGLNSVDHNLV LF+LY A+R Q+L  LKLPAALP +L GL+IAGGLSLIGAVVAEIAAGSAGAGSGLA RI ESGYRLNI RMFAALLLL+L G+ IFF LS LSH++LRRWHESA+ +E
Sbjct:   12 PGADRTLRVLLPIAVLALGVLLWELVVRAGNIPPYVLPNPWLVFSTLISDRAVLLASLLVTLTTTLEGFLLAAIGGIGLAVLFNQSRLIEYSLYPYAIILQVTPIVAIAPLLLVYLPQPAAVLACAWIVAFFPVLANTTLGLNSVDHNLVDLFRLYGATRLQMLFDLKLPAALPYILGGLKIAGGLSLIGAVVAEIAAGSAGAGSGLAYRIVESGYRLNIPRMFAALLLLSLVGIVIFFALSLLSHLMLRRWHESAIVRE 271          
BLAST of mRNA_P-wetherbeei_contig9934.2.1 vs. uniprot
Match: A0A537STX5_9PROT (ABC transporter permease n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537STX5_9PROT)

HSP 1 Score: 347 bits (891), Expect = 6.160e-118
Identity = 196/260 (75.38%), Postives = 219/260 (84.23%), Query Frame = 1
Query:   22 PTDDRALRVAIPLAMLALVVLTWDLAVRGFAIPPYVLPSPGLVAATLVNDAPLLWQSLLVTLAITFEGFLLAALGGVAVAVAFNQWRIAEYALYPYAVILQVTPVVAVAPLLLIYLPQPLAVLACAWIVAFFPVLANTTLGLNSVDHNLVALFQLYKASRWQILLHLKLPAALPQMLAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLACRIAESGYRLNISRMFAALLLLALAGVAIFFVLSALSHVLLRRWHESAVRQE 801
            P  DR LRV +P+AMLAL V  W+L VR   IPPYVLPSP LV +TLV+D  LL  SLLVTL  T +GFLLAA+GGV +AV FNQ R+ EY+LYPYAVILQVTP+VA+APLLLIYLPQ  AVLACAWIVAFFPVLANTTLGLNSVDHNLV LF+LY A+R Q+L  LKLPAA P +L GL+IAGGLSLIGAVVAEIAAGSAGAGSGLA RI ESGYRLNI RMFAALLLL+LAG+ IFF LS LSH++LRRWHESA+ +E
Sbjct:   12 PVADRVLRVLLPIAMLALGVALWELVVRVGGIPPYVLPSPWLVFSTLVSDRALLSASLLVTLTTTLQGFLLAAVGGVGLAVLFNQSRLIEYSLYPYAVILQVTPIVAIAPLLLIYLPQQAAVLACAWIVAFFPVLANTTLGLNSVDHNLVDLFRLYGATRRQVLFDLKLPAAQPYILGGLKIAGGLSLIGAVVAEIAAGSAGAGSGLAYRIVESGYRLNIPRMFAALLLLSLAGILIFFALSVLSHLMLRRWHESAIVRE 271          
BLAST of mRNA_P-wetherbeei_contig9934.2.1 vs. uniprot
Match: A0A6L5FKY6_9HYPH (ABC transporter permease subunit n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FKY6_9HYPH)

HSP 1 Score: 342 bits (877), Expect = 8.870e-116
Identity = 190/257 (73.93%), Postives = 217/257 (84.44%), Query Frame = 1
Query:   31 DRALRVAIPLAMLALVVLTWDLAVRGFAIPPYVLPSPGLVAATLVNDAPLLWQSLLVTLAITFEGFLLAALGGVAVAVAFNQWRIAEYALYPYAVILQVTPVVAVAPLLLIYLPQPLAVLACAWIVAFFPVLANTTLGLNSVDHNLVALFQLYKASRWQILLHLKLPAALPQMLAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLACRIAESGYRLNISRMFAALLLLALAGVAIFFVLSALSHVLLRRWHESAVRQE 801
            +R  R+ +P+A+L L V+ WDL VR  AIPP+VLP PGLV  TL+ D  +LW SLLVTL  T  GFLLA  GG+ +AV FNQ R  E+ALYPYAVILQVTPVVA+APLLLIYLPQ  AVLACAWIVAFFPVLANTTLGLNSVDHNLVALF+LY A R Q+L +LKLPAALPQ+L GLRIAGGLSLIGAVVAEIAAGSAGAGSGLA RIAESGYRLNI RMFAAL+LL++AG+ I+F L+ +SH++LR WHESAVR+E
Sbjct:   17 ERLRRILLPVAVLVLGVVLWDLVVRINAIPPFVLPGPGLVFGTLIADWGILWASLLVTLETTVAGFLLAVAGGIGLAVLFNQSRALEHALYPYAVILQVTPVVAIAPLLLIYLPQQAAVLACAWIVAFFPVLANTTLGLNSVDHNLVALFELYGAKRRQVLWYLKLPAALPQILGGLRIAGGLSLIGAVVAEIAAGSAGAGSGLAYRIAESGYRLNIPRMFAALILLSVAGIIIYFALALMSHLMLRHWHESAVRRE 273          
BLAST of mRNA_P-wetherbeei_contig9934.2.1 vs. uniprot
Match: A0A537VK57_9PROT (ABC transporter permease n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537VK57_9PROT)

HSP 1 Score: 337 bits (863), Expect = 1.150e-113
Identity = 191/261 (73.18%), Postives = 217/261 (83.14%), Query Frame = 1
Query:   19 RPTDDRALRVAIPLAMLALVVLTWDLAVRGFAIPPYVLPSPGLVAATLVNDAPLLWQSLLVTLAITFEGFLLAALGGVAVAVAFNQWRIAEYALYPYAVILQVTPVVAVAPLLLIYLPQPLAVLACAWIVAFFPVLANTTLGLNSVDHNLVALFQLYKASRWQILLHLKLPAALPQMLAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLACRIAESGYRLNISRMFAALLLLALAGVAIFFVLSALSHVLLRRWHESAVRQE 801
            R   DR LRV +P+A+LAL V+ W+L VR   IPPYVLP P LV +TL++D  +L  SLLVTL  T EGFLLAA GGV +AV FNQ R+ EY+LYPYAVILQVTP+VA+APLLLIYLPQ  AVLACAWIVAFFPVLANTTLGL SVDHNL  LF+LY A+R Q+L  LKLPAALP +L GL+IAGGLSLIGAVVAEIAAGSAGAGSGLA RI ESGYRLNI RMFAALLLL++AG+ IFF LS +SH+LLRRWHESA+ +E
Sbjct:   12 RTRVDRVLRVLLPVAVLALGVVVWELLVRIGNIPPYVLPGPHLVFSTLISDWAVLGASLLVTLTTTLEGFLLAAAGGVGLAVLFNQSRLIEYSLYPYAVILQVTPIVAIAPLLLIYLPQQAAVLACAWIVAFFPVLANTTLGLRSVDHNLADLFRLYGATRRQVLWELKLPAALPYILGGLKIAGGLSLIGAVVAEIAAGSAGAGSGLAYRIVESGYRLNIPRMFAALLLLSVAGIVIFFALSLVSHLLLRRWHESAIVRE 272          
BLAST of mRNA_P-wetherbeei_contig9934.2.1 vs. uniprot
Match: A0A6N7H252_9HYPH (ABC transporter permease subunit n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7H252_9HYPH)

HSP 1 Score: 336 bits (861), Expect = 2.400e-113
Identity = 187/261 (71.65%), Postives = 215/261 (82.38%), Query Frame = 1
Query:   19 RPTDDRALRVAIPLAMLALVVLTWDLAVRGFAIPPYVLPSPGLVAATLVNDAPLLWQSLLVTLAITFEGFLLAALGGVAVAVAFNQWRIAEYALYPYAVILQVTPVVAVAPLLLIYLPQPLAVLACAWIVAFFPVLANTTLGLNSVDHNLVALFQLYKASRWQILLHLKLPAALPQMLAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLACRIAESGYRLNISRMFAALLLLALAGVAIFFVLSALSHVLLRRWHESAVRQE 801
            R   + ALR+ +P+ +LAL VL WDL VR   IPPYVLP PGLV  TLV D  LL+ SLLVTL  T +GFLLA  GGV +AV FNQ R+ EY+ YPYAVILQVTP+VA+APLLL++LPQ  AVLACAWIVAFFPVLANTTLGLNSVDHNL  LF+LY ASRWQ+L  LKLPAALP +L GL+IAGGLSLIGAVVAE+AA SAGAGSGLA RIAESGYRLNI RMFAAL+LL+LAG+ I+F L+  SH+LLRRWHESA+ ++
Sbjct:   13 RNRAEAALRLLLPIVVLALGVLVWDLIVRLREIPPYVLPGPGLVFRTLVADWGLLFDSLLVTLKTTLQGFLLAVAGGVGLAVLFNQSRLIEYSFYPYAVILQVTPIVAIAPLLLVWLPQEAAVLACAWIVAFFPVLANTTLGLNSVDHNLADLFRLYGASRWQVLRRLKLPAALPYILGGLKIAGGLSLIGAVVAEMAASSAGAGSGLAYRIAESGYRLNIPRMFAALVLLSLAGIVIYFALALFSHLLLRRWHESAIARD 273          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9934.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A346A0S6_9HYPH4.300e-13480.69ABC transporter permease n=1 Tax=Pseudolabrys taiw... [more]
A0A0Q7TAC8_9HYPH2.030e-12577.13ABC transporter ATP-binding protein n=1 Tax=Pseudo... [more]
UPI0010BF3CB04.230e-12577.47ABC transporter permease n=1 Tax=Pseudolabrys sp. ... [more]
A0A371BAJ8_9HYPH1.410e-12376.06ABC transporter permease n=1 Tax=Pseudolabrys sp. ... [more]
A0A127F4N4_9HYPH1.000e-11873.64Nitrate/sulfonate/bicarbonate ABC transporter perm... [more]
A0A537NX70_9PROT1.520e-11873.85ABC transporter permease n=2 Tax=Alphaproteobacter... [more]
A0A537STX5_9PROT6.160e-11875.38ABC transporter permease n=1 Tax=Alphaproteobacter... [more]
A0A6L5FKY6_9HYPH8.870e-11673.93ABC transporter permease subunit n=1 Tax=Hyphomicr... [more]
A0A537VK57_9PROT1.150e-11373.18ABC transporter permease n=1 Tax=Alphaproteobacter... [more]
A0A6N7H252_9HYPH2.400e-11371.65ABC transporter permease subunit n=1 Tax=Hyphomicr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9934contigP-wetherbeei_contig9934:1334..2140 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog316058.RPB_0572
Preferred nameMA20_40340
PFAMsBPD_transp_1
Model size807
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K02050
KEGG TC3.A.1.16,3.A.1.17
KEGG ModuleM00188
Hectar predicted targeting categorysignal peptide
Exons1
Evalue3.21e-113
EggNOG OGsCOG0600@1|root,COG0600@2|Bacteria,1MVAE@1224|Proteobacteria,2TSP5@28211|Alphaproteobacteria,3JS67@41294|Bradyrhizobiaceae
DescriptionBinding-protein-dependent transport system inner membrane component
Cds size807
COG categoryP
BRITEko00000,ko00002,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187117.699413-CDS-P-wetherbeei_contig9934:1333..21401683187117.699413-CDS-P-wetherbeei_contig9934:1333..2140Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9934 1334..2140 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9934.2.1prot_P-wetherbeei_contig9934.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9934 1334..2140 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9934.2.1

>prot_P-wetherbeei_contig9934.2.1 ID=prot_P-wetherbeei_contig9934.2.1|Name=mRNA_P-wetherbeei_contig9934.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=269bp
MKLPKNRPTDDRALRVAIPLAMLALVVLTWDLAVRGFAIPPYVLPSPGLV
AATLVNDAPLLWQSLLVTLAITFEGFLLAALGGVAVAVAFNQWRIAEYAL
YPYAVILQVTPVVAVAPLLLIYLPQPLAVLACAWIVAFFPVLANTTLGLN
SVDHNLVALFQLYKASRWQILLHLKLPAALPQMLAGLRIAGGLSLIGAVV
AEIAAGSAGAGSGLACRIAESGYRLNISRMFAALLLLALAGVAIFFVLSA
LSHVLLRRWHESAVRQER*
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mRNA from alignment at P-wetherbeei_contig9934:1334..2140+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9934.2.1 ID=mRNA_P-wetherbeei_contig9934.2.1|Name=mRNA_P-wetherbeei_contig9934.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=807bp|location=Sequence derived from alignment at P-wetherbeei_contig9934:1334..2140+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGCTCCCAAAGAATCGCCCGACGGACGATCGTGCGCTCCGCGTTGC TATCCCGCTGGCGATGCTGGCGCTGGTCGTGCTGACGTGGGACCTGGCGG TTCGCGGCTTCGCCATTCCACCTTATGTGCTGCCGTCGCCGGGCCTCGTC GCCGCGACCTTGGTCAACGACGCGCCGCTGCTATGGCAATCGCTGCTGGT GACGCTGGCCATCACTTTCGAAGGCTTCCTGCTGGCGGCGCTTGGCGGCG TCGCGGTAGCGGTCGCCTTCAATCAGTGGCGCATCGCCGAATACGCACTC TATCCCTACGCGGTTATTCTGCAGGTGACGCCGGTGGTCGCGGTCGCGCC CTTGCTGCTGATCTACCTGCCACAGCCATTGGCGGTTCTCGCCTGCGCAT GGATCGTGGCGTTCTTCCCGGTGCTGGCCAACACCACGCTCGGCCTGAAC TCTGTCGACCACAATCTGGTCGCGCTGTTTCAGCTCTACAAGGCGTCGCG CTGGCAGATCCTGTTGCATCTGAAACTGCCGGCGGCGCTGCCGCAGATGC TGGCCGGGCTGCGCATTGCCGGCGGCCTGTCGCTGATCGGCGCGGTGGTG GCGGAAATCGCCGCGGGCTCGGCCGGCGCCGGCTCGGGGCTTGCCTGTCG CATCGCCGAGTCCGGCTACCGGCTCAACATCTCGCGCATGTTCGCCGCAC TGCTGCTGCTGGCGCTCGCCGGCGTCGCCATCTTCTTTGTGCTGTCGGCG CTATCGCATGTCCTGCTGCGCCGCTGGCATGAAAGCGCGGTGCGGCAGGA ACGCTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9934:1334..2140+

>mRNA_P-wetherbeei_contig9934.2.1 ID=mRNA_P-wetherbeei_contig9934.2.1|Name=mRNA_P-wetherbeei_contig9934.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=807bp|location=Sequence derived from alignment at P-wetherbeei_contig9934:1334..2140+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGCTCCCAAAGAATCGCCCGACGGACGATCGTGCGCTCCGCGTTGC
TATCCCGCTGGCGATGCTGGCGCTGGTCGTGCTGACGTGGGACCTGGCGG
TTCGCGGCTTCGCCATTCCACCTTATGTGCTGCCGTCGCCGGGCCTCGTC
GCCGCGACCTTGGTCAACGACGCGCCGCTGCTATGGCAATCGCTGCTGGT
GACGCTGGCCATCACTTTCGAAGGCTTCCTGCTGGCGGCGCTTGGCGGCG
TCGCGGTAGCGGTCGCCTTCAATCAGTGGCGCATCGCCGAATACGCACTC
TATCCCTACGCGGTTATTCTGCAGGTGACGCCGGTGGTCGCGGTCGCGCC
CTTGCTGCTGATCTACCTGCCACAGCCATTGGCGGTTCTCGCCTGCGCAT
GGATCGTGGCGTTCTTCCCGGTGCTGGCCAACACCACGCTCGGCCTGAAC
TCTGTCGACCACAATCTGGTCGCGCTGTTTCAGCTCTACAAGGCGTCGCG
CTGGCAGATCCTGTTGCATCTGAAACTGCCGGCGGCGCTGCCGCAGATGC
TGGCCGGGCTGCGCATTGCCGGCGGCCTGTCGCTGATCGGCGCGGTGGTG
GCGGAAATCGCCGCGGGCTCGGCCGGCGCCGGCTCGGGGCTTGCCTGTCG
CATCGCCGAGTCCGGCTACCGGCTCAACATCTCGCGCATGTTCGCCGCAC
TGCTGCTGCTGGCGCTCGCCGGCGTCGCCATCTTCTTTGTGCTGTCGGCG
CTATCGCATGTCCTGCTGCGCCGCTGGCATGAAAGCGCGGTGCGGCAGGA
ACGCTAG
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