mRNA_P-wetherbeei_contig9932.2.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9932.2.2 vs. uniprot
Match: B8BXV2_THAPS (C2 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXV2_THAPS) HSP 1 Score: 182 bits (462), Expect = 1.430e-48 Identity = 101/197 (51.27%), Postives = 121/197 (61.42%), Query Frame = 1 Query: 1 QVQEMGGNAVLAYHHDFDVEGDSGIVGRACGTACVIVRTDVAAAEEAAAXXXXXXXXXXXXXXXXXXXXXXXPPLDD-------------------ADDGSGFMSDVQLLTLREFPPHVRVRVGGLVMARSVKFLGKLASKLSDQETRDGWWSELREEIRAHARLLCCTHVIGYTESTAIHDDVCILAVTGTAATVR 534 +V E+GGNAVL YH +FD+EGDSG+V R GT CV+++ +E P D A G +VQLLT+ EF P VRVR+GGLV ARSVK+LGKLASKLSDQETRDGWW+ELR+EIR+HAR LCC HVIGY ES+ IHDDVC+L++TGTAATVR Sbjct: 334 KVLELGGNAVLGYHQNFDMEGDSGLVARTFGT-CVLIQK-----KEIVQLASSDRRNNKSISNEHDDRALVSSPRQDMARNTGMLFTMMSEATAAAARQKEGVQEEVQLLTMNEFGPRVRVRIGGLVTARSVKYLGKLASKLSDQETRDGWWTELRDEIRSHARTLCCWHVIGYNESSTIHDDVCVLSITGTAATVR 524
BLAST of mRNA_P-wetherbeei_contig9932.2.2 vs. uniprot
Match: K0T113_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T113_THAOC) HSP 1 Score: 174 bits (442), Expect = 9.110e-46 Identity = 98/198 (49.49%), Postives = 119/198 (60.10%), Query Frame = 1 Query: 1 QVQEMGGNAVLAYHHDFDVEGDSGIVGRACGTACVIVRTDVA--------AAEEAAAXXXXXXXXXXXXXXXXXXXXXXXPPLDDAD------------DGSGFMSDVQLLTLREFPPHVRVRVGGLVMARSVKFLGKLASKLSDQETRDGWWSELREEIRAHARLLCCTHVIGYTESTAIHDDVCILAVTGTAATVR 534 +V E GGNAVL Y FD+EGDSG+V R GT ++ R + A A E A A DGS DV+LLT+ F P VRVR+GGLV ARSVK+LG LASKLSDQETRDGWW+ELR+EI++HA++LCC+HV+GY ES+ IHDDVC+L+VTGTAATVR Sbjct: 15 KVLETGGNAVLGYRQSFDMEGDSGLVARTYGTCVLVHRHEAAKKAAHQPAARRELARDEDGPSPHKSKDAARGIMLSLMGEAQSSAXXXXXXXXXXRKRDGSSQDDDVRLLTVNAFDPRVRVRIGGLVTARSVKYLGNLASKLSDQETRDGWWTELRDEIKSHAKILCCSHVVGYVESSTIHDDVCVLSVTGTAATVR 212
BLAST of mRNA_P-wetherbeei_contig9932.2.2 vs. uniprot
Match: B7G5C6_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G5C6_PHATC) HSP 1 Score: 174 bits (440), Expect = 1.740e-45 Identity = 100/195 (51.28%), Postives = 119/195 (61.03%), Query Frame = 1 Query: 4 VQEMGGNAVLAYHHDFDVEGDSGIVGRACGTACVIVRTDVAAAEEAAAXXXXXXXXXXXXXXXXXXXXXXXPPLDDADDGSG--FMS----------------DVQLLTLREFPPHVRVRVGGLVMARSVKFLGKLASKLSDQETRDGWWSELREEIRAHARLLCCTHVIGYTESTAIHDDVCILAVTGTAATVR 534 V EMGGNAVL YH +FDVEGD GIV R GT ++ R V ++ D GS F+S DVQLLT+R+F P VRVR GGLV ARSVK+LG LASKLSDQETRD WW+ELR+EIR+HA++LCC+HVIGY E++ IHDDV IL++TGTAATVR Sbjct: 276 VLEMGGNAVLGYHQNFDVEGDPGIVARTYGTCVLLERIHVHTSKRTLNEDQDNLTVLDRILDPSSSGITQDISQSLRDRGSSRFFLSESAAVARHRDNVDEKDDVQLLTVRDFEPAVRVRFGGLVTARSVKYLGNLASKLSDQETRDSWWTELRDEIRSHAKILCCSHVIGYLEASTIHDDVAILSITGTAATVR 470
BLAST of mRNA_P-wetherbeei_contig9932.2.2 vs. uniprot
Match: A0A1Z5KM14_FISSO (C2 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KM14_FISSO) HSP 1 Score: 169 bits (428), Expect = 6.980e-44 Identity = 97/206 (47.09%), Postives = 122/206 (59.22%), Query Frame = 1 Query: 4 VQEMGGNAVLAYHHDFDVEGDSGIVGRACGTACVIVRTDVAAAEEAAAXXXXXXXXXXXXXXXXXXXXXXXPPLDD------------ADDGSGFMSD-----------------VQLLTLREFPPHVRVRVGGLVMARSVKFLGKLASKLSDQETRDGWWSELREEIRAHARLLCCTHVIGYTESTAIHDDVCILAVTGTAATVR 534 VQEMG NAV+ Y +FDVEGDSGIV R GTA ++ R + +A+ DD + ++S+ VQLLTLR+F P VR+R+GGLV ARSVK+LG LASKLSDQETRD WW+ELR+EIRAHA++LCCTH++GY E++ IHDDV IL++TGTAATVR Sbjct: 278 VQEMGANAVIGYFQNFDVEGDSGIVARTYGTAVLLQRRRKQPTKASASIGTIGGMSCLSPNNKSLSSIQITRNEDDHLKSFDRSIDGGMESSRFWLSEATLAAVARHRDNPDNDLVQLLTLRDFDPSVRIRLGGLVTARSVKYLGNLASKLSDQETRDSWWTELRDEIRAHAKILCCTHIVGYLEASTIHDDVAILSITGTAATVR 483
BLAST of mRNA_P-wetherbeei_contig9932.2.2 vs. uniprot
Match: A0A836CKY6_9STRA (C2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKY6_9STRA) HSP 1 Score: 168 bits (426), Expect = 1.340e-43 Identity = 116/247 (46.96%), Postives = 132/247 (53.44%), Query Frame = 1 Query: 10 EMGGNAVLAYHHDFDVEGDSGIVGRACGTACVIVRTDVAAAEEAA--AXXXXXXXXXXXXXXXXXXXXXXXPPL--------------------------------------------------------------------------DDADDGSGFMSDVQLLTLREFPPHVRVRVGGLVMARSVKFLGKLASKLSDQETRDGWWSELREEIRAHARLLCCTHVIGYTESTAIHDDVCILAVTGTA 522 + GGNAVL Y DFD+EGDSGIV RA GTACVI RT AE+ A A XXXXXXXXXX P D A G GF+ DVQLLT+ EF PHV+VR+GGLVM+RSVK LGKLASKLSDQETRDGWW+ELREE+R+HA++L C+HV+GY E+T IHDDVCILA TGTA Sbjct: 231 DAGGNAVLGYLQDFDIEGDSGIVARAYGTACVIQRTHQFLAEQQAQLAQHMAAXXXXXXXXXXPDDFAFEAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLAQARGGESTGGLVKGASLYRPASSFFNKTVAKDREDAARKGRGFLGDVQLLTMTEFEPHVKVRIGGLVMSRSVKNLGKLASKLSDQETRDGWWAELREELRSHAKMLSCSHVVGYREATTIHDDVCILAATGTA 477
BLAST of mRNA_P-wetherbeei_contig9932.2.2 vs. uniprot
Match: A0A448YU60_9STRA (C2 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YU60_9STRA) HSP 1 Score: 163 bits (412), Expect = 9.560e-42 Identity = 96/207 (46.38%), Postives = 118/207 (57.00%), Query Frame = 1 Query: 4 VQEMGGNAVLAYHHDFDVEGDSGIVGRACGTACVIVRTDVAAAEEAAAXXXXXXXXXXXXXXXXXXXXXXXP--------PLDDADDGSGFMS----------------------DVQLLTLREFPPHVRVRVGGLVMARSVKFLGKLASKLSDQETRDGWWSELREEIRAHARLLCCTHVIGYTESTAIHDDVCILAVTGTAATVR 534 V + GGNAVL YH +FDVEGDSGIV R GT CV + + A P DD DD G + +V+LLTLR+F P VRVR+GGLV ARSVK+LG LASKLSDQE RD WW+ELR+EIR+HA++LCC+HVIGY E++ IH+DV +L++TGTA TVR Sbjct: 300 VLDKGGNAVLGYHQNFDVEGDSGIVARTYGT-CVRLERRQQHQHQPPAHSVRPSQHNLLQRKRHGRVVAKGPGEGIQTDSERDDDDDVEGRSARRSAFGTMGLVVPETHHHADDDEVKLLTLRDFDPRVRVRIGGLVTARSVKYLGNLASKLSDQEQRDSWWTELRDEIRSHAKILCCSHVIGYLEASTIHEDVAVLSITGTACTVR 505
BLAST of mRNA_P-wetherbeei_contig9932.2.2 vs. uniprot
Match: A0A024GC15_9STRA (C2 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GC15_9STRA) HSP 1 Score: 162 bits (411), Expect = 9.760e-42 Identity = 89/186 (47.85%), Postives = 112/186 (60.22%), Query Frame = 1 Query: 10 EMGGNAVLAYHHDFDVEGDSGIVGRACGTACVIVRTDVAAAEEAAAXXXXXXXXXXXXXXXXXXXXXXXP---------PLDDADDGS--GFMSDVQLLTLREFPPHVRVRVGGLVMARSVKFLGKLASKLSDQETRDGWWSELREEIRAHARLLCCTHVIGYTESTAIHDDVCILAVTGTAATVR 534 E+GGNAVLAY FDVEGDSG+V RACGTAC I+ ++EE P P A + DVQL+TL+ F R+++GG+ ARSVK+LGKLA+KL+DQETRD WW ELR+EIR+HA LL C V+GY ES IHDDVC+++ TGTAAT++ Sbjct: 165 ELGGNAVLAYKQFFDVEGDSGLVARACGTACFIIPVKSVSSEEEGIDAEDTSMLGTTDNLPSERFEMRSPQAKKRHLRTPKASAAEPIHISMQDDVQLITLKSFDASTRIQLGGITSARSVKYLGKLATKLADQETRDSWWLELRDEIRSHATLLQCPFVVGYAESCTIHDDVCVISATGTAATLK 350
BLAST of mRNA_P-wetherbeei_contig9932.2.2 vs. uniprot
Match: A0A7S2E6P7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E6P7_9STRA) HSP 1 Score: 152 bits (385), Expect = 3.020e-41 Identity = 71/96 (73.96%), Postives = 84/96 (87.50%), Query Frame = 1 Query: 247 GFMSDVQLLTLREFPPHVRVRVGGLVMARSVKFLGKLASKLSDQETRDGWWSELREEIRAHARLLCCTHVIGYTESTAIHDDVCILAVTGTAATVR 534 G +VQLLTL+EF VRVR+GGLV ARSVK+L +AS+LSDQETRDGWWSELR+EIR+HAR LCC HVIGYTE+T I+DDVC+L++TGTAATVR Sbjct: 26 GSQDEVQLLTLKEFGTRVRVRIGGLVTARSVKYLANIASRLSDQETRDGWWSELRDEIRSHARTLCCWHVIGYTEATTIYDDVCVLSITGTAATVR 121
BLAST of mRNA_P-wetherbeei_contig9932.2.2 vs. uniprot
Match: A0A8K1C373_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C373_PYTOL) HSP 1 Score: 161 bits (408), Expect = 3.110e-41 Identity = 96/199 (48.24%), Postives = 120/199 (60.30%), Query Frame = 1 Query: 1 QVQEMGGNAVLAYHHDFDVEGDSGIVGRACGTACVIV---RTDVAAAE-EAAAXXXXXXXXXXXXXXXXXXXXXXXP-------------PLDDADDGSGFM--SDVQLLTLREFPPHVRVRVGGLVMARSVKFLGKLASKLSDQETRDGWWSELREEIRAHARLLCCTHVIGYTESTAIHDDVCILAVTGTAATVRRF 540 + E+GGNAVLAY FDVEGDSG+V RACGTAC I RTD + + E +A PL A +G +VQL+TL+ F P R+R+GG+V ARSVK+LGK+A+KL+DQETRD WW ELREEIRAHA+ L C VIGYTES IHDDVC+++ TGTAA ++ + Sbjct: 210 KAMELGGNAVLAYKQFFDVEGDSGLVARACGTACYITPVGRTDASTGDLEPSAHGNDDEGNEMEQDGRATKEEVLDAVASPRFPTRRFRKPLR-APEGFDISVHDEVQLITLKVFSPATRIRLGGIVSARSVKYLGKMATKLADQETRDSWWLELREEIRAHAQSLQCPFVIGYTESCTIHDDVCVISATGTAAVLKNW 407
BLAST of mRNA_P-wetherbeei_contig9932.2.2 vs. uniprot
Match: F0WE18_9STRA (Uncharacterized protein AlNc14C71G4880 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WE18_9STRA) HSP 1 Score: 161 bits (407), Expect = 3.700e-41 Identity = 88/184 (47.83%), Postives = 110/184 (59.78%), Query Frame = 1 Query: 10 EMGGNAVLAYHHDFDVEGDSGIVGRACGTACVIVRTDVAAAEEAAAXXXXXXXXXXXXXXXXXXXXXXXPPLDDADDGSGFM---------SDVQLLTLREFPPHVRVRVGGLVMARSVKFLGKLASKLSDQETRDGWWSELREEIRAHARLLCCTHVIGYTESTAIHDDVCILAVTGTAATVR 534 E+GGNAVLAY FDVEGDSG+V RACGTAC I+ +EE + + DVQL+TL+ F R+++GG+ ARSVK+LGKLA+KL+DQETRD WW ELR+EIR+HA LL C VIGYTES IHDDVC+++ TGTAAT++ Sbjct: 214 ELGGNAVLAYKQFFDVEGDSGLVARACGTACYILPVKTITSEEESTDDKIELEMKENMPTEECEIRSPQTRKRQPKMSKSLVPDPIHMTMQDDVQLITLKSFDALTRIQLGGITSARSVKYLGKLATKLADQETRDSWWLELRDEIRSHASLLQCPFVIGYTESCTIHDDVCVISATGTAATLK 397 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9932.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9932.2.2 >prot_P-wetherbeei_contig9932.2.2 ID=prot_P-wetherbeei_contig9932.2.2|Name=mRNA_P-wetherbeei_contig9932.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=273bp MGGNAVLAYHHDFDVEGDSGIVGRACGTACVIVRTDVAAAEEAAAAASAAback to top mRNA from alignment at P-wetherbeei_contig9932:786..2126+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9932.2.2 ID=mRNA_P-wetherbeei_contig9932.2.2|Name=mRNA_P-wetherbeei_contig9932.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1341bp|location=Sequence derived from alignment at P-wetherbeei_contig9932:786..2126+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9932:786..2126+ >mRNA_P-wetherbeei_contig9932.2.2 ID=mRNA_P-wetherbeei_contig9932.2.2|Name=mRNA_P-wetherbeei_contig9932.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=819bp|location=Sequence derived from alignment at P-wetherbeei_contig9932:786..2126+ (Phaeothamnion wetherbeei SAG_119_79)back to top |