mRNA_P-wetherbeei_contig9927.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9927.1.1 vs. uniprot
Match: A0A835XXL3_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XXL3_9CHLO) HSP 1 Score: 100 bits (249), Expect = 1.720e-22 Identity = 48/82 (58.54%), Postives = 59/82 (71.95%), Query Frame = 1 Query: 37 PKVRARDAILGAFVADSATSGLHWIYDTSKIDDLLKGERALEHPFEFYDPPSCPFYSSTVGNLSPWGHELVPLLTSLKKRGE 282 P VRAR A+LGAFVAD+ATS LHWIY+ K+ ++L EF+DPPSCPFYS+TVG LSP+G EL+PL+ L GE Sbjct: 7 PVVRARAAVLGAFVADAATSPLHWIYNRQKLREVLTNPTDRTAEPEFFDPPSCPFYSATVGGLSPYGQELLPLVRYLAANGE 88
BLAST of mRNA_P-wetherbeei_contig9927.1.1 vs. uniprot
Match: A0A150GFD0_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GFD0_GONPE) HSP 1 Score: 97.1 bits (240), Expect = 2.780e-21 Identity = 49/91 (53.85%), Postives = 63/91 (69.23%), Query Frame = 1 Query: 46 RARDAILGAFVADSATSGLHWIYDTSKIDDLLKGERALEHPFEFYDPPSCPFYSSTVGNLSPWGHELVPLLTSLKKRG--EPSSCFPTLAA 312 RAR A+LGAFVAD+ATS LHWIY +K+ ++LK + EF+DPPSCPFY++TVG LSP+G EL+PL+ L G +P LAA Sbjct: 5 RARAAMLGAFVADAATSPLHWIYKAAKLQEVLKKDGDRSEEPEFFDPPSCPFYTTTVGALSPYGQELLPLVKFLASTGGLDPQEWAKYLAA 95
BLAST of mRNA_P-wetherbeei_contig9927.1.1 vs. uniprot
Match: A0A225UER5_9STRA (ADP-ribosylation/Crystallin J1 n=2 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UER5_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 2.980e-20 Identity = 47/94 (50.00%), Postives = 62/94 (65.96%), Query Frame = 1 Query: 1 LTGSAMAAFNVDPKVRARDAILGAFVADSATSGLHWIYDTSKIDDLLKGERALEHPFEFYDPPSCPFYSSTVGNLSPWGHELVPLLTSLKKRGE 282 LT S+ + ++ K RA A+ GAFVAD+AT GLHWIYD K+ +L+ + EFY+PPSCPFYS G LSP+G E+ PLL + +RGE Sbjct: 36 LTTSSARSMSLTTKQRALAAVTGAFVADAATMGLHWIYDGEKMKELVSARSSGP---EFYEPPSCPFYSYESGALSPYGDEIFPLLQDVAERGE 126
BLAST of mRNA_P-wetherbeei_contig9927.1.1 vs. uniprot
Match: A0A835VSI2_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835VSI2_CHLIN) HSP 1 Score: 93.2 bits (230), Expect = 6.230e-20 Identity = 49/97 (50.52%), Postives = 67/97 (69.07%), Query Frame = 1 Query: 34 DPKVRARDAILGAFVADSATSGLHWIYDTSKIDDLL--KGERALEHPFEFYDPPSCPFYSSTVGNLSPWGHELVPLLTSLKKRG--EPSSCFPTLAA 312 D RAR A+LGA VAD+AT+ LHWIY+ +K+ ++L G+R + EF+DPPSCPFY++TVG LSP+G EL+PL+ + G EP + LAA Sbjct: 3 DVGARARAALLGALVADAATAPLHWIYNAAKLKEVLTTNGDRTADP--EFFDPPSCPFYTNTVGALSPYGQELIPLVKFMGNTGGCEPQAWSKYLAA 97
BLAST of mRNA_P-wetherbeei_contig9927.1.1 vs. uniprot
Match: A0A2K3D8I0_CHLRE (Uncharacterized protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3D8I0_CHLRE) HSP 1 Score: 93.2 bits (230), Expect = 6.240e-20 Identity = 49/97 (50.52%), Postives = 67/97 (69.07%), Query Frame = 1 Query: 34 DPKVRARDAILGAFVADSATSGLHWIYDTSKIDDLL--KGERALEHPFEFYDPPSCPFYSSTVGNLSPWGHELVPLLTSLKKRG--EPSSCFPTLAA 312 D RAR A+LGA VAD+AT+ LHWIY+ +K+ ++L G+R + EF+DPPSCPFY++TVG LSP+G EL+PL+ + G EP + LAA Sbjct: 3 DVGARARAALLGALVADAATAPLHWIYNAAKLKEVLTTNGDRTADP--EFFDPPSCPFYTNTVGALSPYGQELIPLVKFMGNTGGCEPQAWSKYLAA 97
BLAST of mRNA_P-wetherbeei_contig9927.1.1 vs. uniprot
Match: A0A835T9D5_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T9D5_9CHLO) HSP 1 Score: 93.2 bits (230), Expect = 6.240e-20 Identity = 48/93 (51.61%), Postives = 66/93 (70.97%), Query Frame = 1 Query: 46 RARDAILGAFVADSATSGLHWIYDTSKIDDLL--KGERALEHPFEFYDPPSCPFYSSTVGNLSPWGHELVPLLTSLKKRG--EPSSCFPTLAA 312 R R A+LGA VAD+ATS LHWIY+ +K+ ++L G+R + EF+DPPSCPFY++TVG+LSP+G EL+PL+ + G EP + LAA Sbjct: 7 RVRAALLGALVADAATSPLHWIYNAAKLKEVLTTNGDRTADP--EFFDPPSCPFYTNTVGSLSPYGQELIPLIKFIGDTGGVEPQAWAKYLAA 97
BLAST of mRNA_P-wetherbeei_contig9927.1.1 vs. uniprot
Match: A0A662WQ14_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WQ14_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 7.650e-20 Identity = 45/81 (55.56%), Postives = 57/81 (70.37%), Query Frame = 1 Query: 40 KVRARDAILGAFVADSATSGLHWIYDTSKIDDLLKGERALEHPFEFYDPPSCPFYSSTVGNLSPWGHELVPLLTSLKKRGE 282 K RA A++G FVAD+AT GLHWIYD K+ +L+ R P EF++PPSCPFYS T G LSP+G E+ PLL + +RGE Sbjct: 15 KQRAVAAVIGGFVADAATMGLHWIYDGEKLKELV-ASRGAAGP-EFFEPPSCPFYSYTSGALSPYGDEIFPLLKDVAERGE 93
BLAST of mRNA_P-wetherbeei_contig9927.1.1 vs. uniprot
Match: A8J725_CHLRE (Predicted protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8J725_CHLRE) HSP 1 Score: 92.4 bits (228), Expect = 1.130e-19 Identity = 47/91 (51.65%), Postives = 63/91 (69.23%), Query Frame = 1 Query: 34 DPKVRARDAILGAFVADSATSGLHWIYDTSKIDDLL--KGERALEHPFEFYDPPSCPFYSSTVGNLSPWGHELVPLLTSLKKRGEPSSCFP 300 D RAR A+LGA VAD+AT+ LHWIY+ +K+ ++L G+R + EF+DPPSCPFY++TVG LSP+G EL+PL+ K G C P Sbjct: 3 DVGARARAALLGALVADAATAPLHWIYNAAKLKEVLTTNGDRTADP--EFFDPPSCPFYTNTVGALSPYGQELIPLV---KFMGNTGGCEP 88
BLAST of mRNA_P-wetherbeei_contig9927.1.1 vs. uniprot
Match: A0A329RRM2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RRM2_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 3.270e-19 Identity = 45/91 (49.45%), Postives = 59/91 (64.84%), Query Frame = 1 Query: 10 SAMAAFNVDPKVRARDAILGAFVADSATSGLHWIYDTSKIDDLLKGERALEHPFEFYDPPSCPFYSSTVGNLSPWGHELVPLLTSLKKRGE 282 S+ + ++ K RA A+ G FVAD+AT GLHWIYD K+ +L R+ EFY+PPSCPFYS G LSP+G E+ PLL + +RGE Sbjct: 48 SSPSTMSLSTKQRALAAVAGGFVADAATMGLHWIYDADKMKELAAARRSGGP--EFYEPPSCPFYSYESGALSPYGDEIFPLLQDVAERGE 136
BLAST of mRNA_P-wetherbeei_contig9927.1.1 vs. uniprot
Match: H3GV26_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GV26_PHYRM) HSP 1 Score: 89.4 bits (220), Expect = 3.600e-19 Identity = 46/81 (56.79%), Postives = 54/81 (66.67%), Query Frame = 1 Query: 40 KVRARDAILGAFVADSATSGLHWIYDTSKIDDLLKGERALEHPFEFYDPPSCPFYSSTVGNLSPWGHELVPLLTSLKKRGE 282 K RA A+ G FVAD+AT GLHWIYD K+ L R+ P EFYDPPSCPFYS G LSP+G E+ PLL + +RGE Sbjct: 6 KQRALAAVAGGFVADAATMGLHWIYDGDKMKQLAAA-RSTAGP-EFYDPPSCPFYSYESGALSPYGDEIFPLLQDVAERGE 84 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9927.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9927.1.1 >prot_P-wetherbeei_contig9927.1.1 ID=prot_P-wetherbeei_contig9927.1.1|Name=mRNA_P-wetherbeei_contig9927.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=99bp MAAFNVDPKVRARDAILGAFVADSATSGLHWIYDTSKIDDLLKGERALEHback to top mRNA from alignment at P-wetherbeei_contig9927:1766..2212+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9927.1.1 ID=mRNA_P-wetherbeei_contig9927.1.1|Name=mRNA_P-wetherbeei_contig9927.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=447bp|location=Sequence derived from alignment at P-wetherbeei_contig9927:1766..2212+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9927:1766..2212+ >mRNA_P-wetherbeei_contig9927.1.1 ID=mRNA_P-wetherbeei_contig9927.1.1|Name=mRNA_P-wetherbeei_contig9927.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=297bp|location=Sequence derived from alignment at P-wetherbeei_contig9927:1766..2212+ (Phaeothamnion wetherbeei SAG_119_79)back to top |