mRNA_P-wetherbeei_contig9918.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9918.1.1 vs. uniprot
Match: A0A127EWQ2_9HYPH (RNA methyltransferase TrmH, group 3 n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EWQ2_9HYPH) HSP 1 Score: 374 bits (959), Expect = 8.820e-128 Identity = 203/259 (78.38%), Postives = 224/259 (86.49%), Query Frame = 1 Query: 76 TREQIERRERFERARRDTLKPTAEGTVVLYGLHTVTAALANPDREIRKLLATENAARRLTEDGVKLRVDPEIVRPHAIAERLSPDAVHQGLYLEAGPLPSPPIEEIAPEGVVLVLDQITDPHNVGAIFRSAAAFGATAIVTTARHSPEATGVLAKSASGALDLVPLITVQNLARGLAALKERGFFVVGLDSSGDGDLAELPLRKPLALVLGAEGKGLRQLTRDLCDHVARLNLPGAIKSLNVSNAAALSLYVATSRLNR 852 T EQ +RRERFERARRD+LKP A+ T VLYG HTVTAALANP+R++RK LAT+NAARRL ++ + PEIVRP AIA RL PDAVHQGLY+EA PLPSP IEE+A G+VLVLDQITDPHNVGAIFRSAAAF ATAIVTTARHSPEATGVLAK+ASGAL+ VPL+TVQNLAR +A LKERGF VVGLDSSG DLA LPLR PLALVLGAEGKGLRQLTRD CD VARL+LPGAI+SLNVSNAAAL+LYVA + L R Sbjct: 29 THEQADRRERFERARRDSLKP-ADDTAVLYGWHTVTAALANPNRQLRKFLATDNAARRLADENIASPRAPEIVRPDAIAARLPPDAVHQGLYVEANPLPSPAIEELATTGMVLVLDQITDPHNVGAIFRSAAAFAATAIVTTARHSPEATGVLAKAASGALEHVPLVTVQNLARAMAELKERGFLVVGLDSSGADDLAALPLRAPLALVLGAEGKGLRQLTRDTCDSVARLDLPGAIQSLNVSNAAALALYVAHTGLKR 286
BLAST of mRNA_P-wetherbeei_contig9918.1.1 vs. uniprot
Match: A0A345ZRG9_9HYPH (23S rRNA (Guanosine(2251)-2'-O)-methyltransferase RlmB n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A345ZRG9_9HYPH) HSP 1 Score: 364 bits (935), Expect = 3.930e-124 Identity = 193/258 (74.81%), Postives = 220/258 (85.27%), Query Frame = 1 Query: 73 ATREQIERRERFERARRDTLKPTAEGTVVLYGLHTVTAALANPDREIRKLLATENAARRLTEDGVKLRVDPEIVRPHAIAERLSPDAVHQGLYLEAGPLPSPPIEEIAPEGVVLVLDQITDPHNVGAIFRSAAAFGATAIVTTARHSPEATGVLAKSASGALDLVPLITVQNLARGLAALKERGFFVVGLDSSGDGDLAELPLRKPLALVLGAEGKGLRQLTRDLCDHVARLNLPGAIKSLNVSNAAALSLYVATSRL 846 ATREQIERRERFERARR+ L+ A+G V++YG HTVTAAL NP R IR+LLATENAARRLTE+G+ E+VRP AIAERL PDAVHQGLYLE PLP+P IE++ G+VLVLDQITDPHNVGAIFRSAAAF A AIVTT RHSP+ATG LAK+ASGAL+ VPLI VQNLARGLAALK GF +VGLDS G+ DLA L LR PLALVLGAEGKGLRQLT++ CDH+AR+++PGAIKSLNVSNAAAL+LYVA S++ Sbjct: 29 ATREQIERRERFERARREDLRAEADGPVIMYGWHTVTAALQNPARRIRRLLATENAARRLTEEGIPAPPQLEVVRPGAIAERLLPDAVHQGLYLETEPLPAPAIEDLPARGLVLVLDQITDPHNVGAIFRSAAAFAAAAIVTTQRHSPDATGALAKAASGALEHVPLINVQNLARGLAALKASGFTIVGLDSDGEADLAALTLRAPLALVLGAEGKGLRQLTKETCDHLARIDVPGAIKSLNVSNAAALALYVARSKI 286
BLAST of mRNA_P-wetherbeei_contig9918.1.1 vs. uniprot
Match: A0A371BDE4_9HYPH (23S rRNA (Guanosine(2251)-2'-O)-methyltransferase RlmB n=2 Tax=unclassified Pseudolabrys TaxID=2638514 RepID=A0A371BDE4_9HYPH) HSP 1 Score: 359 bits (922), Expect = 3.720e-122 Identity = 191/255 (74.90%), Postives = 215/255 (84.31%), Query Frame = 1 Query: 73 ATREQIERRERFERARRDTLKP-TAEGTVVLYGLHTVTAALANPDREIRKLLATENAARRLTEDGVKLRVDPEIVRPHAIAERLSPDAVHQGLYLEAGPLPSPPIEEIAPEGVVLVLDQITDPHNVGAIFRSAAAFGATAIVTTARHSPEATGVLAKSASGALDLVPLITVQNLARGLAALKERGFFVVGLDSSGDGDLAELPLRKPLALVLGAEGKGLRQLTRDLCDHVARLNLPGAIKSLNVSNAAALSLYVA 834 ATREQ+ERRERF RARR+ L+ T + V+LYG HTV AAL NP R +R+LL T+NAARRL E+G+ + PEIVRP AI ERL PDAVHQGLYLEA PLPSPPIEE+ G VLVLDQITDPHNVGAIFRSAAAF ATAIVTT RHSP+AT LAK+ASGAL+LVPLI VQNLARGL ALKERGF VVGLDS G+ DL+++ LRKPLALVLGAEGKGLRQ TR+LCD VAR+++PG IKSLNVSNAA LSLY+A Sbjct: 29 ATREQVERRERFTRARREDLRAATDDELVILYGWHTVVAALRNPTRRLRRLLVTDNAARRLEEEGIAPAIAPEIVRPSAIDERLLPDAVHQGLYLEADPLPSPPIEEVPAHGTVLVLDQITDPHNVGAIFRSAAAFAATAIVTTQRHSPDATAALAKAASGALELVPLIAVQNLARGLTALKERGFMVVGLDSDGEADLSDMTLRKPLALVLGAEGKGLRQSTRELCDKVARIDMPGEIKSLNVSNAAVLSLYIA 283
BLAST of mRNA_P-wetherbeei_contig9918.1.1 vs. uniprot
Match: A0A0Q7TJT9_9HYPH (RNA methyltransferase n=1 Tax=Pseudolabrys sp. Root1462 TaxID=1736466 RepID=A0A0Q7TJT9_9HYPH) HSP 1 Score: 356 bits (913), Expect = 6.130e-121 Identity = 191/262 (72.90%), Postives = 218/262 (83.21%), Query Frame = 1 Query: 73 ATREQIERRERFERARRDTLKPTAEGT--VVLYGLHTVTAALANPDREIRKLLATENAARRLTEDGVKLRVDPEIVRPHAIAERLSPDAVHQGLYLEAGPLPSPPIEEIAPEGVVLVLDQITDPHNVGAIFRSAAAFGATAIVTTARHSPEATGVLAKSASGALDLVPLITVQNLARGLAALKERGFFVVGLDSSGDGDLAELPLRKPLALVLGAEGKGLRQLTRDLCDHVARLNLPGAIKSLNVSNAAALSLYVATSRLNR 852 AT EQ++RRERF RARR+ L+ EG V+LYG H VTAAL NP R++RK LAT+NAARRL ++G+ + PEIVRP AI +RL PDAVHQGLYLEA PLPSP +E++ G +LVLDQITDPHNVGAIFRSAAAF ATAIVTT RHSP+AT LAK+ASGAL+ VPLITVQNL RGL LKERGF VVGLDSSGD DL+EL L +PLALVLGAEGKGLRQLTR++CDHVAR++LPG IKSLNVSNAA LSLYVA SR+ R Sbjct: 14 ATHEQVDRRERFTRARREDLRAAPEGDEPVILYGWHPVTAALRNPARKLRKFLATDNAARRLADEGIAGTLAPEIVRPSAIDDRLLPDAVHQGLYLEADPLPSPALEDVPARGTILVLDQITDPHNVGAIFRSAAAFAATAIVTTQRHSPDATAALAKAASGALEYVPLITVQNLGRGLTTLKERGFLVVGLDSSGDADLSELILSQPLALVLGAEGKGLRQLTREICDHVARIDLPGEIKSLNVSNAAVLSLYVA-SRIGR 274
BLAST of mRNA_P-wetherbeei_contig9918.1.1 vs. uniprot
Match: A0A6N7GUD2_9HYPH (23S rRNA (Guanosine(2251)-2'-O)-methyltransferase RlmB n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GUD2_9HYPH) HSP 1 Score: 351 bits (901), Expect = 3.950e-119 Identity = 194/282 (68.79%), Postives = 220/282 (78.01%), Query Frame = 1 Query: 1 MAHRPPDRPKSGXXXXXXXXXXXXATREQIERRERFERARRDTLKPTAEGTVVLYGLHTVTAALANPDREIRKLLATENAARRLTEDGVKLRVDPEIVRPHAIAERLSPDAVHQGLYLEAGPLPSPPIEEIAPEGVVLVLDQITDPHNVGAIFRSAAAFGATAIVTTARHSPEATGVLAKSASGALDLVPLITVQNLARGLAALKERGFFVVGLDSSGDGDLAELPLRKPLALVLGAEGKGLRQLTRDLCDHVARLNLPGAIKSLNVSNAAALSLYVATSRL 846 M RPP RPK G T EQ +RRERFERARR++L+P + VLYG HTV AAL NP R IR+L+ATENAARRL E+G+ PEIVRP AIAERL+PDAVHQGLYLEA PLPSP I IA G VLVLDQITDPHNVGAI R+AA F A+VTTARHSPEATG LAK+ASGAL+ VP++ VQNLAR + LKERG+ +VGLDSSG+ DL ++PLR PLAL+LGAEGKGLRQLTR+ CDHV RL+LPG IKSLNVSNAAAL+LYVAT RL Sbjct: 1 MRDRPPGRPKPGARPGPKSG----VTHEQRDRRERFERARRESLRP--DDLSVLYGWHTVKAALGNPVRRIRRLVATENAARRLAEEGIT--ASPEIVRPAAIAERLAPDAVHQGLYLEAEPLPSPEITAIADSGPVLVLDQITDPHNVGAILRTAAGFDVAAVVTTARHSPEATGALAKAASGALEYVPIVIVQNLARAMTELKERGYLLVGLDSSGEVDLGDVPLRAPLALILGAEGKGLRQLTRENCDHVGRLDLPGRIKSLNVSNAAALALYVATRRL 274
BLAST of mRNA_P-wetherbeei_contig9918.1.1 vs. uniprot
Match: A0A521VZ92_9HYPH (23S rRNA (Guanosine(2251)-2'-O)-methyltransferase RlmB n=1 Tax=Xanthobacteraceae bacterium TaxID=2021379 RepID=A0A521VZ92_9HYPH) HSP 1 Score: 342 bits (878), Expect = 1.420e-115 Identity = 185/252 (73.41%), Postives = 205/252 (81.35%), Query Frame = 1 Query: 94 RRERFERARRDTLKPTAEGTVVLYGLHTVTAALANPDREIRKLLATENAARRLTEDGVKLRVDPEIVRPHAIAERLSPDAVHQGLYLEAGPLPSPPIEEIAPEGVVLVLDQITDPHNVGAIFRSAAAFGATAIVTTARHSPEATGVLAKSASGALDLVPLITVQNLARGLAALKERGFFVVGLDSSGDGDLAELPLRKPLALVLGAEGKGLRQLTRDLCDHVARLNLPGAIKSLNVSNAAALSLYVATSRLN 849 RRE ER R P + TVVLYG H+V AALANP R +RKL+ TENAARRL E+ + L DPEIVRPH I L+PDAVHQGLYLEA PLPSP IE IAPEG+VLVLDQITDPHNVGAI RSA AF AIVTTARHSPEATGVLAKSASGAL+ VP +TVQNLAR L ALKERGF VGLDS G GDLA++ L +P+ALVLGAEGKGLRQLTR+ CD VARL++PG IKSLNVSNAAAL+LY+A SRL+ Sbjct: 27 RREGGERRR-----PREDDTVVLYGWHSVAAALANPRRHVRKLMLTENAARRLAEENIALPFDPEIVRPHDIDRLLTPDAVHQGLYLEADPLPSPAIETIAPEGIVLVLDQITDPHNVGAILRSACAFAVKAIVTTARHSPEATGVLAKSASGALEHVPFVTVQNLARALTALKERGFLTVGLDSEGSGDLAQIELTEPVALVLGAEGKGLRQLTRETCDVVARLDMPGEIKSLNVSNAAALALYIAASRLS 273
BLAST of mRNA_P-wetherbeei_contig9918.1.1 vs. uniprot
Match: A0A7C4VHF1_9PROT (23S rRNA (Guanosine(2251)-2'-O)-methyltransferase RlmB n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A7C4VHF1_9PROT) HSP 1 Score: 338 bits (867), Expect = 6.210e-114 Identity = 189/285 (66.32%), Postives = 216/285 (75.79%), Query Frame = 1 Query: 1 MAHRPPDRPKSGXXXXXXXXXXXXATREQIERRERFERARRDTLKPTAEGTVVLYGLHTVTAALANPDREIRKLLATENAARRLTEDGVKLRVDPEIVRPHAIAERLSPDAVHQGLYLEAGPLPSPPIEEIAPEGVVLVLDQITDPHNVGAIFRSAAAFGATAIVTTARHSPEATGVLAKSASGALDLVPLITVQNLARGLAALKERGFFVVGLDSSGDGDLAELPLRKPLALVLGAEGKGLRQLTRDLCDHVARLNLPGAIKSLNVSNAAALSLYVATSRLNRG 855 MA+RP +RP+ TREQIERRERFERARR +L+P E +LYG HTV AAL NP R IR+LL TENAARRL E + PEIVRP AIA RL DAVHQGLY EA PL P ++ + P+G+VLVLD ITDPHNVGAI R+++AFG A+VTTARHSPEATGVLAK+ASG L+ VPLI VQNLAR LA LK+RGF +VGLD+ G +LA LPL PLALVLGAEGKGLRQ TR CDH+ARL+LPGAIKSLNVSNAAAL+LYVAT L +G Sbjct: 1 MANRPSNRPRPAQQKPG-------TTREQIERRERFERARRLSLRPAGE-VAILYGWHTVLAALNNPARRIRRLLVTENAARRLAELALPNAPRPEIVRPDAIAARLPADAVHQGLYAEADPLMPPALDALEPQGIVLVLDHITDPHNVGAIIRTSSAFGVRAVVTTARHSPEATGVLAKAASGGLEHVPLIAVQNLARALATLKQRGFQLVGLDADGPDNLATLPLHAPLALVLGAEGKGLRQSTRQACDHLARLDLPGAIKSLNVSNAAALALYVATQALQQG 277
BLAST of mRNA_P-wetherbeei_contig9918.1.1 vs. uniprot
Match: A0A4Q7FTS6_9BRAD (23S rRNA (Guanosine(2251)-2'-O)-methyltransferase RlmB n=8 Tax=Bradyrhizobium TaxID=374 RepID=A0A4Q7FTS6_9BRAD) HSP 1 Score: 335 bits (859), Expect = 1.390e-112 Identity = 177/254 (69.69%), Postives = 203/254 (79.92%), Query Frame = 1 Query: 106 FERARRDTLKPT-------AEGTVVLYGLHTVTAALANPDREIRKLLATENAARRLTEDGVKLRVDPEIVRPHAIAERLSPDAVHQGLYLEAGPLPSPPIEEIAPEGVVLVLDQITDPHNVGAIFRSAAAFGATAIVTTARHSPEATGVLAKSASGALDLVPLITVQNLARGLAALKERGFFVVGLDSSGDGDLAELPLRKPLALVLGAEGKGLRQLTRDLCDHVARLNLPGAIKSLNVSNAAALSLYVATSRL 846 FE+ R+ +P A+G V+LYG HTV+ ALANP+R IRKL TENAARRL E+G+ RV PE+VRP I +RL PDAVHQGL +EA PLPSP I+ + PEG+VLVLDQITDPHNVGAI RSAAAF AIVTTARHSPEATGVLAKSASGAL+LVPL+TVQNLAR L AL ERGF VGLDS G DL+++ LR+PLALVLGAEGKGLRQLTR+ C VARL++PG IKSLNVSNAA L+LY+ SRL Sbjct: 30 FEKGRKSAGRPVWRSRDSDADGPVILYGWHTVSLALANPERRIRKLFVTENAARRLAEEGIDTRVPPELVRPSTIDQRLGPDAVHQGLLVEADPLPSPDIDTLEPEGIVLVLDQITDPHNVGAILRSAAAFAVRAIVTTARHSPEATGVLAKSASGALELVPLVTVQNLARALTALNERGFLTVGLDSQGSEDLSQVALRQPLALVLGAEGKGLRQLTRETCSVVARLDMPGEIKSLNVSNAAVLALYIGASRL 283
BLAST of mRNA_P-wetherbeei_contig9918.1.1 vs. uniprot
Match: A0A1Y6KGT9_9BRAD (23S rRNA (Guanosine-2'-O-)-methyltransferase rlmB n=10 Tax=Bradyrhizobium TaxID=374 RepID=A0A1Y6KGT9_9BRAD) HSP 1 Score: 334 bits (857), Expect = 2.280e-112 Identity = 175/235 (74.47%), Postives = 199/235 (84.68%), Query Frame = 1 Query: 142 AEGTVVLYGLHTVTAALANPDREIRKLLATENAARRLTEDGVKLRVDPEIVRPHAIAERLSPDAVHQGLYLEAGPLPSPPIEEIAPEGVVLVLDQITDPHNVGAIFRSAAAFGATAIVTTARHSPEATGVLAKSASGALDLVPLITVQNLARGLAALKERGFFVVGLDSSGDGDLAELPLRKPLALVLGAEGKGLRQLTRDLCDHVARLNLPGAIKSLNVSNAAALSLYVATSRL 846 ++G V+LYG HTV+ ALANP+R IRKL TENAARRL ++G++ RV PEIVRP I +RL PDAVHQGL EA PLPSP I+ +APEG++LVLDQITDPHNVGAI RSAAAF AIVTTARHSPEATGVLAKSASGAL+LVP+ITVQNLAR L L ERGF VGLDS+GD D+A +PLR+PLALVLGAEGKGLRQLTR+ C VARL++PGAIKSLNVSNAA L+LYV SRL Sbjct: 41 SDGPVILYGWHTVSLALANPNRTIRKLYLTENAARRLADEGIETRVAPEIVRPSQIDQRLGPDAVHQGLLAEADPLPSPDIDTLAPEGLILVLDQITDPHNVGAILRSAAAFDVKAIVTTARHSPEATGVLAKSASGALELVPIITVQNLARALTRLNERGFQTVGLDSAGDADIAAVPLRQPLALVLGAEGKGLRQLTRETCSVVARLDMPGAIKSLNVSNAAVLALYVGASRL 275
BLAST of mRNA_P-wetherbeei_contig9918.1.1 vs. uniprot
Match: UPI001BAA0E63 (23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB n=1 Tax=Bradyrhizobium lablabi TaxID=722472 RepID=UPI001BAA0E63) HSP 1 Score: 329 bits (844), Expect = 1.810e-110 Identity = 176/254 (69.29%), Postives = 202/254 (79.53%), Query Frame = 1 Query: 106 FERARRDTLKP-------TAEGTVVLYGLHTVTAALANPDREIRKLLATENAARRLTEDGVKLRVDPEIVRPHAIAERLSPDAVHQGLYLEAGPLPSPPIEEIAPEGVVLVLDQITDPHNVGAIFRSAAAFGATAIVTTARHSPEATGVLAKSASGALDLVPLITVQNLARGLAALKERGFFVVGLDSSGDGDLAELPLRKPLALVLGAEGKGLRQLTRDLCDHVARLNLPGAIKSLNVSNAAALSLYVATSRL 846 FE+ R+ +P +A+G +LYG HTV+AALANP+R IRKLL TENAARRL E+ + RV PEIVRP+ I +RL PDAVHQGL EA PLPSP I+ +A +G+VLVLDQITDPHNVGAI RSAAAF AIVTTARHSPEATGVLAKSASGAL+LVPL+ VQNLAR L AL ERGF VGLDS G DL ++ LR+PLALVLGAEGKGLRQLTR+ C VARL++PG IKSLNVSNAA L+LY+ SRL Sbjct: 18 FEKGRKSPGRPAWRDREASADGPAILYGWHTVSAALANPERHIRKLLVTENAARRLAEENIDTRVTPEIVRPNLIDQRLGPDAVHQGLLAEADPLPSPDIDTLAQQGIVLVLDQITDPHNVGAIMRSAAAFAVKAIVTTARHSPEATGVLAKSASGALELVPLVLVQNLARALTALNERGFLTVGLDSEGSEDLGKVELREPLALVLGAEGKGLRQLTRETCATVARLDMPGEIKSLNVSNAAVLALYIGASRL 271 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9918.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9918.1.1 >prot_P-wetherbeei_contig9918.1.1 ID=prot_P-wetherbeei_contig9918.1.1|Name=mRNA_P-wetherbeei_contig9918.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=286bp MAHRPPDRPKSGPHPGAKHGAKPGATREQIERRERFERARRDTLKPTAEGback to top mRNA from alignment at P-wetherbeei_contig9918:1141..1998- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9918.1.1 ID=mRNA_P-wetherbeei_contig9918.1.1|Name=mRNA_P-wetherbeei_contig9918.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=858bp|location=Sequence derived from alignment at P-wetherbeei_contig9918:1141..1998- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9918:1141..1998- >mRNA_P-wetherbeei_contig9918.1.1 ID=mRNA_P-wetherbeei_contig9918.1.1|Name=mRNA_P-wetherbeei_contig9918.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=858bp|location=Sequence derived from alignment at P-wetherbeei_contig9918:1141..1998- (Phaeothamnion wetherbeei SAG_119_79)back to top |