mRNA_P-wetherbeei_contig9914.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9914.1.1 vs. uniprot
Match: A0A7V3NZA6_9DELT (Tetratricopeptide repeat protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V3NZA6_9DELT) HSP 1 Score: 141 bits (356), Expect = 3.780e-35 Identity = 79/260 (30.38%), Postives = 138/260 (53.08%), Query Frame = 1 Query: 1 GRTGLFLDERGRPLEDQYAYLLRMERCSKDSLVEFM----------AQVGSVDEDDKPAGPRARQVEVV-----EYFPESDLELQTLMMRCATLRALRDQITAQQALSHDESVVFRFTVGHMESGPQAVNHYLAMCPEIPESARMGGKFRSNPMSCARIRERIPHITARVMCDCALSGH-STYPNPLLHLQSLPA-------PDELDAAQMRALAEDYAAALKELDEVQQRLSRFGDVLVRCFEREKLSELATTRGLLKL 711 G+ GLF+D G+P+E Q+A+L ++E+ K+ + E + + VG +E VEV+ EY P+ DL+LQ L+ C + L +I ++ L+HDE V + +GH+E G +AVN++L+ + S + +F+ NPMSC +IR+++PH++++ C+C + YP PLLHL L P +L A +++ L +DY ++ +Q L+ F++ ++ E+ T G LK+ Sbjct: 360 GKRGLFIDAEGQPIEHQFAFLDKVEKVKKEKIYEIIQRLYGSEMTQSSVGLKNEKVTEISEPETSVEVLVARPEEYNPDQDLQLQILLSSCEVMNLLVRKINDEKELTHDERNVLTYVLGHLEKGAEAVNYFLSQIINVHSSMFLKSRFQGNPMSCPKIRQKVPHLSSKANCNCQFDPRLNMYPTPLLHLYGLKEGKSLTTDPVKLSAVKIQQLVKDYIKIKGDIKRLQFLAEELEKNLIEVFKQNEIKEIPTPIGKLKM 619
BLAST of mRNA_P-wetherbeei_contig9914.1.1 vs. uniprot
Match: A0A7Y8HHZ4_9DELT (Uncharacterized protein n=1 Tax=Syntrophaceae bacterium TaxID=2052184 RepID=A0A7Y8HHZ4_9DELT) HSP 1 Score: 140 bits (354), Expect = 7.210e-35 Identity = 84/261 (32.18%), Postives = 135/261 (51.72%), Query Frame = 1 Query: 1 GRTGLFLDERGRPLEDQYAYLLRMERCSKDSLVE----FMAQVGSVDEDDK------PAGPRARQVEVV------EYFPESDLELQTLMMRCATLRALRDQITAQQALSHDESVVFRFTVGHMESGPQAVNHYLAMCPEIPESARMGGKFRSNPMSCARIRERIPHITARVMCDCALSGH-STYPNPLLHLQSLPAPD-------ELDAAQMRALAEDYAAALKELDEVQQRLSRFGDVLVRCFEREKLSELATTRGLLKL 711 GR G+F+ G+P E Q AYL +MER K+ + E F S +++ PAGP E+V EY P+ DL+LQ L+ C L L +I ++ L+++E V + +GH++ GP+AVN +L+ S + +F+ NPMSC +IR RIPHIT++ C+C + YP PLLHL L P +L A +++ + ++Y E+ +Q L+ F++ ++ ++ T G LK+ Sbjct: 360 GRRGVFISADGQPFEHQLAYLDKMERVKKEKIFEAIQRFFGPAPSPGAEERATGAAVPAGPSIPGPELVVLKPVEEYKPDQDLQLQFLLGSCEVLNLLTRKIFEEKELTNEERNVLTYVLGHLDKGPEAVNFFLSQTVNANPSMFLKSRFQGNPMSCPKIRSRIPHITSKADCNCQFDPRLNMYPTPLLHLHGLQQPGALAGDPAKLSAVKLQQIVKEYIKIKGEMKRLQVLAEGLEKTLIEVFKQSEVQQIPTPVGTLKM 620
BLAST of mRNA_P-wetherbeei_contig9914.1.1 vs. uniprot
Match: A0A3M1X5J2_9DELT (Uncharacterized protein (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1X5J2_9DELT) HSP 1 Score: 124 bits (312), Expect = 1.660e-30 Identity = 79/261 (30.27%), Postives = 128/261 (49.04%), Query Frame = 1 Query: 1 GRTGLFLDERGRPLEDQYAYLLRMERCSKDSLVEFMAQVGSV---------DEDDKPA---------GPRARQVEVVEYFPESDLELQTLMMRCATLRALRDQITAQQALSHDESVVFRFTVGHMESGPQAVNHYLAMCPEIPESARMGGKFRSNPMSCARIRERIPHITARVMCDCALS-GHSTYPNPLLHLQ----SLPAPDELDAAQMRALAEDYAAALKELDEVQQRLSRFGDVLVRCFEREKLSELATTRGLLKLD 714 GR FL+ G P+E+ + +L + D LVE + V ++D+ P A EY ESD ++ L+ RC L L +++ + LS +E +V T+GH+E GP+AVNH L+ CP + + + R NP+SC +IR R+PHIT V C+C + YP PLLH++ + P E++ + E+Y KEL+ ++ L + + FE ++E+ T GLL+++ Sbjct: 60 GRYSRFLNPDGSPVENPFLFLNSAPLVNPDLLVEAAGKARVVRAFPVKEKWEDDEDPLENVFDGTAFSGSAETSPGPEYDFESDPQVARLLDRCPVLAELVNRVLTFRELSQEERIVLTHTLGHLERGPEAVNHLLSKCPGVAPNQFLKSPLRGNPISCPKIRARVPHITEGVRCNCEFNPSRMMYPTPLLHIEGEYSAPPTVLEVNTMGLTRTVEEYMRLKKELNAIEMALEKLEARIFAAFEEAGVTEMRTPFGLLRVE 320
BLAST of mRNA_P-wetherbeei_contig9914.1.1 vs. uniprot
Match: A0A6N2D8X3_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A6N2D8X3_9DELT) HSP 1 Score: 119 bits (298), Expect = 2.880e-27 Identity = 65/193 (33.68%), Postives = 103/193 (53.37%), Query Frame = 1 Query: 1 GRTGLFLDERGRPLEDQYAYLLRMERCSKDSLVEFMAQVGSV-------DED---DKPAGPRARQVEVVEYFPESDLE----LQTLMMRCATLRALRDQITAQQALSHDESVVFRFTVGHMESGPQAVNHYLAMCPEIPESARMGGKFRSNPMSCARIRERIPHITARVMCDCALSGH-STYPNPLLHLQSLP 534 GR LD+ G+P+++ + L + R +++L++ A +G+ DE + P GP R F ESD E L L+ CA L L + ++ L H E +V R +GH+ G AVN+ CPEIP A +G + +P+SCAR+R+R+P++++ V C+CA H YP+P+LH +P Sbjct: 316 GRRACLLDDDGQPVDNPFPILHQAPRLDRETLLDLFAALGNPTPRRLHGDEPQHTEAPPGPGVRPPPPPAPFTESDFETRPALAALLRGCAVLDTLVRRGLEERRLDHPERIVLRHAMGHLPDGIDAVNYVFRRCPEIPPDALLGKRLAGSPISCARVRQRVPNVSSSVPCNCAFPNHPDQYPSPVLHAHGIP 508
BLAST of mRNA_P-wetherbeei_contig9914.1.1 vs. uniprot
Match: F2NCZ9_DESAR (Tetratricopeptide TPR_2 repeat-containing protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) TaxID=880072 RepID=F2NCZ9_DESAR) HSP 1 Score: 119 bits (298), Expect = 3.320e-27 Identity = 86/263 (32.70%), Postives = 123/263 (46.77%), Query Frame = 1 Query: 1 GRTGLFLDERGRPLEDQ---------------YAYLLRMER-CSKDSLVEFMAQVGSVD-----EDDKPAGPRARQVEVVEYFPESDLELQTLMMRCATLRALRDQITAQQALSHDESVVFRFTVGHMESGPQAVNHYLAMCPEIPESARMGGKFRSNPMSCARIRERIPHITARVMCDCALS-GHSTYPNPLLHLQSL------PAPDELDAAQMRALAEDYAAALKELDEVQQRLSRFGDVLVRCFEREKLSELATTRGLL 705 GR +FL GRPLEDQ YA + R++ + S E A G +D E P E+ Y + D + Q L+ RC L+AL D++ L+ DE++V TVGH+E+GP AVN C + + + R +PMSC +IR RIP ITA V C+CA + YP P++HL L P LD+ Q + L ++Y ++L E Q L+R+ L F + + T G L Sbjct: 355 GRRAVFLHPDGRPLEDQLELLQSVAKAPRRAVYALIQRLQAGAAPASGPEPAAAAGKLDAEPPWETAPSPAPLPGVPEI--YHLDQDTQFQYLLSRCPVLKALADKVNQTSMLTKDETLVLIHTVGHLENGPAAVNELFQRCLNADPTLFLKSRLRGHPMSCPKIRARIPDITAAVACNCAFDLAVNLYPTPIIHLHGLKPGAAAPTGLTLDSLQFQHLLQEYVKLRQQLRETQLLLTRYEQQLSDFFTAAGVETVNTPLGTL 615
BLAST of mRNA_P-wetherbeei_contig9914.1.1 vs. uniprot
Match: A0A7C2ENJ6_9BACT (Uncharacterized protein n=1 Tax=candidate division NC10 bacterium TaxID=2072417 RepID=A0A7C2ENJ6_9BACT) HSP 1 Score: 118 bits (296), Expect = 6.530e-27 Identity = 69/203 (33.99%), Postives = 104/203 (51.23%), Query Frame = 1 Query: 1 GRTGLFLDERGRPLEDQYAYLLRMERCSKDSLVEFMAQVGSVDEDDKPAG------------PRARQVEVVEYFP-----------ESDLELQTLMMRCATLRALRDQITAQQALSHDESVVFRFTVGHMESGPQAVNHYLAMCPEIPESARMGGKFRSNPMSCARIRERIPHITARVMCDCALS-GHSTYPNPLLHLQSLPA 537 GR L E G P D Y L + R S+++L ++++ + + +PA P + E+ E FP E++ E+ LM C L AL+ ++ + L+HDE VV ++GH +G AVN+ L C ++P +AR+ F NP+SC +IR+RIPH+T V C+C YPNP LHL +LPA Sbjct: 353 GRRSRLLQEDGTPCADPYTTLRQQARVSREALYAAISRLKARQVEAEPAXXXXXXXXXXXXXPTPDRGEIREAFPTAPPAWTAADFETNPEVSHLMRHCPVLAALKTKVDDHRRLTHDEQVVLMHSLGHSGAGVLAVNYLLEACVDVPPTARLQSAFSGNPISCPKIRKRIPHVTGAVPCNCQFDIASGQYPNPRLHLLTLPA 555
BLAST of mRNA_P-wetherbeei_contig9914.1.1 vs. uniprot
Match: A0A3M1V912_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1V912_9BACT) HSP 1 Score: 117 bits (294), Expect = 1.320e-26 Identity = 85/236 (36.02%), Postives = 116/236 (49.15%), Query Frame = 1 Query: 1 GRTGLFLDERGRPLEDQYAYLLRMERCSKDSLVEFM----AQVGSV---------DEDDKPAG--PRARQVEVVEYFP-------ESDLELQTLMMRCATLRALRDQITAQQALSHDESVVFRFTVGHMESGPQAVNHYLAMCPEIPESARMGGKFRSNPMSCARIRERIPHITARVMCDCALS-GHSTYPNPLLHLQSLPAPDEL--DAAQMRALAEDYAAALKELDEVQQRLSR 633 G LFLD+ GRPLEDQ L + R + L A V +V + D+PAG P + E P E+D ++ L C L L+ Q+ + L HDE +V T+GH+ +GPQAVN+ L C ++ + R NPMSCA+IR+RI H+T RV C+C S + YP P LHL +LP PD +AAQ A AE A L ++ + R Sbjct: 382 GYRSLFLDDDGRPLEDQLGVLRDVPRLERPDLFRIADALKATVVAVPAETPEPPDERQDEPAGQQPDTQAPAPPELPPSWTEADFETDPQVAHLFHNCPVLAELKRQVEEHRQLMHDERLVLVHTLGHLPAGPQAVNYLLRKCLDVAPDQLLKSPLRGNPMSCAKIRKRIGHVTRRVPCNCDFSFAPNHYPTPTLHLLTLP-PDARRPEAAQPPADAESMARRFGVLQRRREEIER 616
BLAST of mRNA_P-wetherbeei_contig9914.1.1 vs. uniprot
Match: F8E7T1_FLESM (DNA primase small subunit n=2 Tax=Flexistipes sinusarabici (strain ATCC 49648 / DSM 4947 / MAS 10) TaxID=717231 RepID=F8E7T1_FLESM) HSP 1 Score: 117 bits (293), Expect = 1.360e-26 Identity = 67/247 (27.13%), Postives = 125/247 (50.61%), Query Frame = 1 Query: 1 GRTGLFLDERGRPLEDQYAYLLRMERCSKDSLVEFMA--QVGSVDEDD--KPAGPRARQ---VEVVEYFPESDLELQTLMMRCATLRALRDQITAQQALSHDESVVFRFTVGHMESGPQAVNHYLAMCPEIPESARMGGKFRSNPMSCARIRERIPHITARVMCDCA-LSGHSTYPNPLLHLQSLPAPD------ELDAAQMRALAEDYAAALKELDEVQQRLSRFGDVLVRCFEREKLSELATTRG 699 G+ FLD +GR + D YL +++ S+ +++++ ++ + E+ K P + V +Y +SD E Q L+ +C ++ + + + LS+DE +V TVGH+E+G +AVN A C I + + K + NP+SCA+IR ++P IT+++ C+C + YP P+LHLQ P ++++ + EDY K+ E + + + + + F+ + +T G Sbjct: 321 GKRSCFLDSKGREITDVDNYLKNIQKASESEILDYLNYYRLSGIYENTGTKQMAPSEKMEIPVHTTQYNIDSDKEFQYLIYKCPVIKEIFNNAICKNELSYDEMIVLTHTVGHLENGVEAVNSIFAKCFNIQQEKFLKSKLKGNPVSCAKIRSKVPDITSKMDCNCQFVYAEGLYPTPVLHLQEQDIPSKIPRGLDINSVNFQNALEDYIKLKKQTYETKLIMKEYEEKFEKLFKNSGVDTFSTAIG 567
BLAST of mRNA_P-wetherbeei_contig9914.1.1 vs. uniprot
Match: A0A7V6DG27_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7V6DG27_9BACT) HSP 1 Score: 113 bits (283), Expect = 3.520e-25 Identity = 75/220 (34.09%), Postives = 103/220 (46.82%), Query Frame = 1 Query: 1 GRTGLFLDERGRPLEDQYAYLLRMERCSKDSLVEFMAQVGSVDEDDKPAG-----PRARQVEVVEYFPESDLELQT---------------LMMRCATLRALRDQITAQQALSHDESVVFRFTVGHMESGPQAVNHYLAMCPEIPESARMGGKFRSNPMSCARIRERIPHITARVMCDCALSGH-STYPNPLLHLQSLPAPDELDAAQMRALAEDYAAAL 597 GR FLDE G P+ + L R +D++V A++ + P PR EV P + + L+ RC L ALR + + L+HDE VV + T+GH+ G AVN+ L C +P SA + R NP+SC +IR R+PHITARV C C + TYP PLLH+ LP P++L + ED L Sbjct: 351 GRRSCFLDESGAPIARPFEALRATPRLGRDAIV---ARIDAARSRPAPPAEEVPEPRRSPAEVETQPPPLAIPSRPAWTAVDFDRTPAFARLLARCPVLGALRRKAEEDRRLTHDEIVVLQHTLGHLPGGVAAVNYLLERCLTVPPSAFLKSTLRGNPVSCPKIRARLPHITARVPCACEFPDNPDTYPTPLLHMSGLP-PEDLTPPPPTVIPEDSVRRL 566
BLAST of mRNA_P-wetherbeei_contig9914.1.1 vs. uniprot
Match: A0A3M1S237_9BACT (Uncharacterized protein n=1 Tax=Candidatus Schekmanbacteria bacterium TaxID=2419984 RepID=A0A3M1S237_9BACT) HSP 1 Score: 113 bits (282), Expect = 4.770e-25 Identity = 71/256 (27.73%), Postives = 122/256 (47.66%), Query Frame = 1 Query: 10 GLFLDERGRPLEDQYAYLLRMERCSKDSLVEFMAQVGSVD-----------EDDKPAGPRARQVE----------VVEYFPESDLELQTLMMRCATLRALRDQITAQQALSHDESVVFRFTVGHMESGPQAVNHYLAMCPEIPESARMGGKFRSNPMSCARIRERIPHITARVMCDCALSGH-STYPNPLLHLQSLPAPDE--LDAAQMRALAEDYAAALKELDEVQQRLSRFGDVLVRCFEREKLSELATTRGLL 705 GLF+D G P +DQ+A+L +E +K S+ ++ + ++ E ++ AG + V EY ++D E Q + ++C ++ + ++ LS+DE +V +VGH+++GP AVN L C S+ + + R NP+SC +IR R+P IT+ V C+C + YP P+LHL+SL A + +Y K L + ++ + + L F + L T+ G L Sbjct: 359 GLFVDGEGNPYKDQFAFLFGIESATKSSIYSYIEEKKNIYPLYHPTNKKIVESEEEAGVEEISISEKDSLKGAIYVEEYNIDNDEEFQYIALKCPVIQKIYEKANQTSQLSNDEIIVLSHSVGHLKNGPLAVNAILQKCVNADSSSYLKSRLRGNPISCPKIRTRVPDITSSVDCNCTFEPLLNMYPTPVLHLESLKQKTAGLTSAITFEIIVSEYLKIKKNLQDQEKLMMSYQKKLEEFFSNAGVDSLNTSYGEL 614 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9914.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9914.1.1 >prot_P-wetherbeei_contig9914.1.1 ID=prot_P-wetherbeei_contig9914.1.1|Name=mRNA_P-wetherbeei_contig9914.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=238bp GRTGLFLDERGRPLEDQYAYLLRMERCSKDSLVEFMAQVGSVDEDDKPAGback to top mRNA from alignment at P-wetherbeei_contig9914:1..714+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9914.1.1 ID=mRNA_P-wetherbeei_contig9914.1.1|Name=mRNA_P-wetherbeei_contig9914.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=714bp|location=Sequence derived from alignment at P-wetherbeei_contig9914:1..714+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9914:1..714+ >mRNA_P-wetherbeei_contig9914.1.1 ID=mRNA_P-wetherbeei_contig9914.1.1|Name=mRNA_P-wetherbeei_contig9914.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=714bp|location=Sequence derived from alignment at P-wetherbeei_contig9914:1..714+ (Phaeothamnion wetherbeei SAG_119_79)back to top |