prot_P-wetherbeei_contig99.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig99.1.1
Unique Nameprot_P-wetherbeei_contig99.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length228
Homology
BLAST of mRNA_P-wetherbeei_contig99.1.1 vs. uniprot
Match: A0A6H5KKG1_9PHAE (VPS13_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKG1_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 1.840e-61
Identity = 125/226 (55.31%), Postives = 156/226 (69.03%), Query Frame = 0
Query:    3 DALLRSPAVLGSLQMLGSPTVLLSEWAAGVYDLFALPIRAIPQGPLPTLWATGRGVASLLRHASAGTLSSLSGLSSSIARNLTGPPGGRRGLLGAVARPIVGTMDLVFRTSQSLMERTGVDSALAAAASGGHRRRRPSVLAGRPAPCRLNRELWFRWTLLPPGHELVWATVQPVRCGYASYAAPDTAVSVVLSDKSVLLFRGAHGCEKLWKRIEYADIVLLERGME 228
            DALLRS AV+GSL+ LGSPT LLSEW  GVYDLFA+PI+A+PQGP  T  AT RGV+SLLRHASAGTLSS+SG+S++++RNL    GGR    G V RPI GTM LV+RTS+SL+  TGVDS    A +           A  PA   LN +LW+R  LLP GHE ++ T  P  C  ASY+  +  V++VLS K+V L+RG  GCE LWK+I++ DI L+E+  E
Sbjct: 4393 DALLRSLAVVGSLEALGSPTTLLSEWGKGVYDLFAMPIKAMPQGPSSTFRATFRGVSSLLRHASAGTLSSVSGVSNALSRNL----GGR----GGVVRPIAGTMGLVYRTSKSLIASTGVDSEWTHAEAN---------TAANPATAYLNADLWYRCCLLPAGHEFLYRT--PALCSNASYSQANVPVTIVLSSKAVFLYRGGSGCETLWKQIDHQDITLVEQSAE 4599          
BLAST of mRNA_P-wetherbeei_contig99.1.1 vs. uniprot
Match: A0A3P3YB14_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YB14_PLABS)

HSP 1 Score: 80.9 bits (198), Expect = 6.880e-14
Identity = 40/84 (47.62%), Postives = 60/84 (71.43%), Query Frame = 0
Query:    1 MADALLRSPAVLGSLQMLGSPTVLLSEWAAGVYDLFALPIRAIPQGPLPTLWATGRGVASLLRHASAGTLSSLSGLSSSIARNL 84
            +AD ++RSP +LGSL ++G+PT ++S  + G++DL  LP RA+ QGP    WA  +GV SL++H S GTL S+SG + S+A N+
Sbjct: 2200 LADTIIRSPMLLGSLDLIGNPTQVVSSISKGIHDLVTLPTRALTQGPRAFAWAAMQGVGSLIQHISEGTLMSVSGFTHSLAGNM 2283          
BLAST of mRNA_P-wetherbeei_contig99.1.1 vs. uniprot
Match: A0A7S2MD94_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MD94_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.800e-13
Identity = 40/82 (48.78%), Postives = 58/82 (70.73%), Query Frame = 0
Query:    3 DALLRSPAVLGSLQMLGSPTVLLSEWAAGVYDLFALPIRAIPQGPLPTLWATGRGVASLLRHASAGTLSSLSGLSSSIARNL 84
            DALLRSP ++GSLQ+LGSPT L++   +G+ DL  +P+ A+P GP+ T+     G+ S  RH S G L+S+SG  SS+++NL
Sbjct:  253 DALLRSPLLVGSLQLLGSPTALIAGIYSGINDLVTMPLEAMPNGPVATMQGLLSGILSFTRHLSGGALASVSGFGSSLSKNL 334          
BLAST of mRNA_P-wetherbeei_contig99.1.1 vs. uniprot
Match: A0A0L0DHF4_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DHF4_THETB)

HSP 1 Score: 77.8 bits (190), Expect = 7.960e-13
Identity = 42/84 (50.00%), Postives = 61/84 (72.62%), Query Frame = 0
Query:    1 MADALLRSPAVLGSLQMLGSPTVLLSEWAAGVYDLFALPIRAIPQGPLPTLWATGRGVASLLRHASAGTLSSLSGLSSSIARNL 84
            ++DALL +PA+LGSL++LG+PT L+ + ++G+ DLF +P      GP+      G GV+SLLRH ++GTL SLS LS ++ARNL
Sbjct: 3406 ISDALLMTPALLGSLELLGNPTGLVRDVSSGLADLFLMPYHGWSSGPVGFAAGLGSGVSSLLRHTASGTLGSLSSLSGAMARNL 3489          
BLAST of mRNA_P-wetherbeei_contig99.1.1 vs. uniprot
Match: A0A0H5QH82_9EUKA (VPS13_C domain-containing protein n=2 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QH82_9EUKA)

HSP 1 Score: 77.4 bits (189), Expect = 1.040e-12
Identity = 39/86 (45.35%), Postives = 61/86 (70.93%), Query Frame = 0
Query:    1 MADALLRSPAVLGSLQMLGSPTVLLSEWAAGVYDLFALPIRAIPQGPLPTLWATGRGVASLLRHASAGTLSSLSGLSSSIARNLTG 86
            +AD ++ SP + GS+ +LG+PT L+S ++ G+  L  LP RA+ +GP    WAT +G+ SLL++ S GTL+S+SG + S+ARN+ G
Sbjct: 1762 LADVIMISPLLFGSMDLLGNPTQLISSFSKGIQGLVRLPSRALTRGPRALAWATLQGIGSLLQNISEGTLTSVSGFTHSLARNVDG 1847          
BLAST of mRNA_P-wetherbeei_contig99.1.1 vs. uniprot
Match: X6LV22_RETFI (Vacuolar protein-sorting protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6LV22_RETFI)

HSP 1 Score: 72.8 bits (177), Expect = 3.010e-11
Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 0
Query:    1 MADALLRSPAVLGSLQMLGSPTVLLSEWAAGVYDLFALPIRAIPQGPLPTLWATGRGVASLLRHASAGTLSSLSGLSSSIARNL 84
            +AD  LRSP V+GSL +LG+PT  +    +G  DL ++P+ ++  GP    W  GRG  +L++H S GT +S+S  S S+ARNL
Sbjct:  107 LADIFLRSPVVMGSLNLLGNPTQFVESVGSGFRDLVSIPMSSLHDGPQAFFWGIGRGFLALVQHVSEGTFTSVSTFSDSMARNL 190          
BLAST of mRNA_P-wetherbeei_contig99.1.1 vs. uniprot
Match: A0A7S3LLJ3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LLJ3_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.170e-10
Identity = 45/86 (52.33%), Postives = 57/86 (66.28%), Query Frame = 0
Query:    1 MADALLRSPAVLGSLQMLGSPTVLLSEWAAGVYDLFALPIRAIPQGPLPTLWATG--RGVASLLRHASAGTLSSLSGLSSSIARNL 84
            +ADALL SP +LGSL++LG+ T L+   +AGV+DLF LP+  I  G  P     G  RG +SL RH S G L S+SG S S+ARNL
Sbjct:   28 IADALLNSPKLLGSLEILGNMTGLVRAMSAGVWDLFFLPLEEIRHGFGPGAIIRGVVRGWSSLFRHVSEGALLSVSGFSGSVARNL 113          
BLAST of mRNA_P-wetherbeei_contig99.1.1 vs. uniprot
Match: A0A2R5GB42_9STRA (Vacuolar protein sorting-associated protein 13B n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GB42_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.850e-10
Identity = 46/86 (53.49%), Postives = 56/86 (65.12%), Query Frame = 0
Query:    1 MADALLRSPAVLGSLQMLGSPTVLLSEWAAGVYDLFALPIRAIPQG--PLPTLWATGRGVASLLRHASAGTLSSLSGLSSSIARNL 84
            +ADALL SPA+LGSL++LG+P        AGVYDL   P++AI  G  P   L    RG +SLL H S G L S+SG S+SIARNL
Sbjct: 3655 IADALLGSPALLGSLEILGNPVGFARSVGAGVYDLVFQPLKAIRHGYGPGGILRGVARGWSSLLIHLSEGALMSVSGFSNSIARNL 3740          
BLAST of mRNA_P-wetherbeei_contig99.1.1 vs. uniprot
Match: A0A4D9D6P0_9STRA (VPS13_C domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6P0_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.420e-9
Identity = 40/84 (47.62%), Postives = 55/84 (65.48%), Query Frame = 0
Query:    1 MADALLRSPAVLGSLQMLGSPTVLLSEWAAGVYDLFALPIRAIPQGPLPTLWATGRGVASLLRHASAGTLSSLSGLSSSIARNL 84
            +ADA+ RSPA+LGSL+++GSP +L+S   +G+ DL  L           +L   GRG+ SL RH   GTL+SL+G SSS+ RNL
Sbjct: 1057 VADAIFRSPALLGSLEIIGSPAILVSRVVSGLKDLVLLSASG-------SLTGAGRGLLSLTRHVVGGTLASLAGFSSSVRRNL 1133          
BLAST of mRNA_P-wetherbeei_contig99.1.1 vs. uniprot
Match: W7TJC5_9STRA (VPS13_C domain-containing protein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJC5_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.520e-9
Identity = 40/84 (47.62%), Postives = 55/84 (65.48%), Query Frame = 0
Query:    1 MADALLRSPAVLGSLQMLGSPTVLLSEWAAGVYDLFALPIRAIPQGPLPTLWATGRGVASLLRHASAGTLSSLSGLSSSIARNL 84
            +ADA+ RSPA+LGSL+++GSP +L+S   +G+ DL  L           +L   GRG+ SL RH   GTL+SL+G SSS+ RNL
Sbjct: 3509 VADAIFRSPALLGSLEIIGSPAILVSRVVSGLKDLVMLSASG-------SLTGAGRGLLSLTRHVVGGTLASLAGFSSSVRRNL 3585          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig99.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKG1_9PHAE1.840e-6155.31VPS13_C domain-containing protein n=2 Tax=Ectocarp... [more]
A0A3P3YB14_PLABS6.880e-1447.62Uncharacterized protein n=2 Tax=Plasmodiophora bra... [more]
A0A7S2MD94_9STRA1.800e-1348.78Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A0L0DHF4_THETB7.960e-1350.00Uncharacterized protein n=1 Tax=Thecamonas trahens... [more]
A0A0H5QH82_9EUKA1.040e-1245.35VPS13_C domain-containing protein n=2 Tax=Spongosp... [more]
X6LV22_RETFI3.010e-1144.05Vacuolar protein-sorting protein n=1 Tax=Reticulom... [more]
A0A7S3LLJ3_9STRA1.170e-1052.33Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A2R5GB42_9STRA1.850e-1053.49Vacuolar protein sorting-associated protein 13B n=... [more]
A0A4D9D6P0_9STRA1.420e-947.62VPS13_C domain-containing protein n=1 Tax=Nannochl... [more]
W7TJC5_9STRA1.520e-947.62VPS13_C domain-containing protein n=3 Tax=Nannochl... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031645Vacuolar protein sorting-associated protein 13, C-terminalPFAMPF16909VPS13_Ccoord: 10..84
e-value: 2.4E-11
score: 43.8
IPR039782Vacuolar protein sorting-associated protein 13BPANTHERPTHR12517VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13Bcoord: 2..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig99contigP-wetherbeei_contig99:781..2145 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig99.1.1mRNA_P-wetherbeei_contig99.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig99 80..2145 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig99.1.1 ID=prot_P-wetherbeei_contig99.1.1|Name=mRNA_P-wetherbeei_contig99.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=228bp
MADALLRSPAVLGSLQMLGSPTVLLSEWAAGVYDLFALPIRAIPQGPLPT
LWATGRGVASLLRHASAGTLSSLSGLSSSIARNLTGPPGGRRGLLGAVAR
PIVGTMDLVFRTSQSLMERTGVDSALAAAASGGHRRRRPSVLAGRPAPCR
LNRELWFRWTLLPPGHELVWATVQPVRCGYASYAAPDTAVSVVLSDKSVL
LFRGAHGCEKLWKRIEYADIVLLERGME
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031645VPS13_C
IPR039782VPS13B