mRNA_P-wetherbeei_contig99.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig99.1.1 vs. uniprot
Match: A0A6H5KKG1_9PHAE (VPS13_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKG1_9PHAE) HSP 1 Score: 265 bits (677), Expect = 1.740e-74 Identity = 150/264 (56.82%), Postives = 186/264 (70.45%), Query Frame = 3 Query: 594 QVFLSLDRTPLSFAPVDLRGVLERPDAIAAQVASSYMADALLRSPAVLGSLQMLGSPTVLLSEWAAGVYDLFALPIRAIPQGPLPTLWATGRGVASLLRHASAGTLSSLSGLSSSIARNLTGPPGGRRGLLGAVARPIVGTMDLVFRTSQSLMERTGVDSALAAAASGGHRRRRPSVLAGRPAPCRLNRELWFRWTLLPPGHELVWATVQPVRCGYASYAAPDTAVSVVLSDKSVLLFRGAHGCEKLWKRIEYADIVLLERGME 1385 QVFL+LD++PL F PV LRGVL RPD IA Q+AS+Y DALLRS AV+GSL+ LGSPT LLSEW GVYDLFA+PI+A+PQGP T AT RGV+SLLRHASAGTLSS+SG+S++++RNL GGR G V RPI GTM LV+RTS+SL+ TGVDS A + A PA LN +LW+R LLP GHE ++ T P C ASY+ + V++VLS K+V L+RG GCE LWK+I++ DI L+E+ E Sbjct: 4355 QVFLALDKSPLLFRPVSLRGVLARPDEIAEQIASNYAVDALLRSLAVVGSLEALGSPTTLLSEWGKGVYDLFAMPIKAMPQGPSSTFRATFRGVSSLLRHASAGTLSSVSGVSNALSRNL----GGR----GGVVRPIAGTMGLVYRTSKSLIASTGVDSEWTHAEAN---------TAANPATAYLNADLWYRCCLLPAGHEFLYRT--PALCSNASYSQANVPVTIVLSSKAVFLYRGGSGCETLWKQIDHQDITLVEQSAE 4599
BLAST of mRNA_P-wetherbeei_contig99.1.1 vs. uniprot
Match: A0A3P3YB14_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YB14_PLABS) HSP 1 Score: 108 bits (271), Expect = 1.980e-21 Identity = 64/158 (40.51%), Postives = 98/158 (62.03%), Query Frame = 3 Query: 513 RAAPFFFALFPRTISSPSS----------HISTSICA-QVFLSLDRTPLSFAPVDLRGVLERPDAIAAQVASSYMADALLRSPAVLGSLQMLGSPTVLLSEWAAGVYDLFALPIRAIPQGPLPTLWATGRGVASLLRHASAGTLSSLSGLSSSIARNL 953 R P F AL + I+SP HIS S + + +L ++TPL FAP+ LR VL + + ++++ Y+AD ++RSP +LGSL ++G+PT ++S + G++DL LP RA+ QGP WA +GV SL++H S GTL S+SG + S+A N+ Sbjct: 2127 RGNPEFLALLSK-ITSPRFFAHILDISPVHISLSFSSSRTYLDTNQTPLHFAPIVLRSVLSSQERLIKELSACYLADTIIRSPMLLGSLDLIGNPTQVVSSISKGIHDLVTLPTRALTQGPRAFAWAAMQGVGSLIQHISEGTLMSVSGFTHSLAGNM 2283
BLAST of mRNA_P-wetherbeei_contig99.1.1 vs. uniprot
Match: A0A0L0DHF4_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DHF4_THETB) HSP 1 Score: 105 bits (263), Expect = 2.120e-20 Identity = 73/215 (33.95%), Postives = 111/215 (51.63%), Query Frame = 3 Query: 552 ISSPSSHISTSICAQVFLSLDRTPLSFAPVDLRGVLERPDAIAAQVASSYMADALLRSPAVLGSLQMLGSPTVLLSEWAAGVYDLFALPIRAIPQGPLPTLWATGRGVASLLRHASAGTLSSLSGLSSSIARNLT---------------------------GPPGGRR------------GLLGAVARPIVGTMDLVFRTSQSLMERTGVDSAL 1079 +S ++ + V L L+ TP++ L RP+ + +A+ Y++DALL +PA+LGSL++LG+PT L+ + ++G+ DLF +P GP+ G GV+SLLRH ++GTL SLS LS ++ARNL PGG GLLGAVARP+ G + +V +TS+ LM+ G+ A+ Sbjct: 3356 VSPLEFEVTLRVSVGVALGLEATPVAVGGARLGAHCWRPEVLGEILAARYISDALLMTPALLGSLELLGNPTGLVRDVSSGLADLFLMPYHGWSSGPVGFAAGLGSGVSSLLRHTASGTLGSLSSLSGAMARNLNKLSAARAQAQALXXXXXXXXXXXXXXXAEPGGGENAGGRLFSVLSSGLLGAVARPVEGVLAMVSQTSRGLMQTVGLADAV 3570
BLAST of mRNA_P-wetherbeei_contig99.1.1 vs. uniprot
Match: A0A7S2MD94_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MD94_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.200e-18 Identity = 52/121 (42.98%), Postives = 75/121 (61.98%), Query Frame = 3 Query: 591 AQVFLSLDRTPLSFAPVDLRGVLERPDAIAAQVASSYMADALLRSPAVLGSLQMLGSPTVLLSEWAAGVYDLFALPIRAIPQGPLPTLWATGRGVASLLRHASAGTLSSLSGLSSSIARNL 953 +QV+L LD TPL F V + V + + Y DALLRSP ++GSLQ+LGSPT L++ +G+ DL +P+ A+P GP+ T+ G+ S RH S G L+S+SG SS+++NL Sbjct: 214 SQVYLGLDHTPLYFKAVSVTSVSVASSTLTRDLGEHYATDALLRSPLLVGSLQLLGSPTALIAGIYSGINDLVTMPLEAMPNGPVATMQGLLSGILSFTRHLSGGALASVSGFGSSLSKNL 334
BLAST of mRNA_P-wetherbeei_contig99.1.1 vs. uniprot
Match: A0A2R5GB42_9STRA (Vacuolar protein sorting-associated protein 13B n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GB42_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 3.820e-17 Identity = 60/121 (49.59%), Postives = 79/121 (65.29%), Query Frame = 3 Query: 597 VFLSLDRTPLSFAPVDLRGVLERPDAIAAQVASSYMADALLRSPAVLGSLQMLGSPTVLLSEWAAGVYDLFALPIRAIPQG--PLPTLWATGRGVASLLRHASAGTLSSLSGLSSSIARNL 953 +F+ +DRTPL F+ V L V E A+ ++A++Y+ADALL SPA+LGSL++LG+P AGVYDL P++AI G P L RG +SLL H S G L S+SG S+SIARNL Sbjct: 3620 MFVGIDRTPLRFSEVSLVRVFEGAKALRNELAANYIADALLGSPALLGSLEILGNPVGFARSVGAGVYDLVFQPLKAIRHGYGPGGILRGVARGWSSLLIHLSEGALMSVSGFSNSIARNL 3740
BLAST of mRNA_P-wetherbeei_contig99.1.1 vs. uniprot
Match: A0A0H5QH82_9EUKA (VPS13_C domain-containing protein n=2 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QH82_9EUKA) HSP 1 Score: 94.7 bits (234), Expect = 8.280e-17 Identity = 47/123 (38.21%), Postives = 82/123 (66.67%), Query Frame = 3 Query: 591 AQVFLSLDRTPLSFAPVDLRGVLERPDAIAAQVASSYMADALLRSPAVLGSLQMLGSPTVLLSEWAAGVYDLFALPIRAIPQGPLPTLWATGRGVASLLRHASAGTLSSLSGLSSSIARNLTG 959 ++ +L P+ + V+L+ VL D + +++++Y+AD ++ SP + GS+ +LG+PT L+S ++ G+ L LP RA+ +GP WAT +G+ SLL++ S GTL+S+SG + S+ARN+ G Sbjct: 1725 SRAYLGCQSLPVRLSAVELKSVLSSSDRLIKELSANYLADVIMISPLLFGSMDLLGNPTQLISSFSKGIQGLVRLPSRALTRGPRALAWATLQGIGSLLQNISEGTLTSVSGFTHSLARNVDG 1847
BLAST of mRNA_P-wetherbeei_contig99.1.1 vs. uniprot
Match: X6LV22_RETFI (Vacuolar protein-sorting protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6LV22_RETFI) HSP 1 Score: 92.8 bits (229), Expect = 1.560e-16 Identity = 48/119 (40.34%), Postives = 75/119 (63.03%), Query Frame = 3 Query: 597 VFLSLDRTPLSFAPVDLRGVLERPDAIAAQVASSYMADALLRSPAVLGSLQMLGSPTVLLSEWAAGVYDLFALPIRAIPQGPLPTLWATGRGVASLLRHASAGTLSSLSGLSSSIARNL 953 VF+ + + PL PV+L V PD + +++++Y+AD LRSP V+GSL +LG+PT + +G DL ++P+ ++ GP W GRG +L++H S GT +S+S S S+ARNL Sbjct: 72 VFVGVGKAPLVLQPVNLSNVQCAPDHLLHELSAAYLADIFLRSPVVMGSLNLLGNPTQFVESVGSGFRDLVSIPMSSLHDGPQAFFWGIGRGFLALVQHVSEGTFTSVSTFSDSMARNL 190
BLAST of mRNA_P-wetherbeei_contig99.1.1 vs. uniprot
Match: A0A4D9D6P0_9STRA (VPS13_C domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6P0_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 7.560e-16 Identity = 55/121 (45.45%), Postives = 75/121 (61.98%), Query Frame = 3 Query: 591 AQVFLSLDRTPLSFAPVDLRGVLERPDAIAAQVASSYMADALLRSPAVLGSLQMLGSPTVLLSEWAAGVYDLFALPIRAIPQGPLPTLWATGRGVASLLRHASAGTLSSLSGLSSSIARNL 953 ++VFL LD +PL F V L V P A + S+Y+ADA+ RSPA+LGSL+++GSP +L+S +G+ DL L +L GRG+ SL RH GTL+SL+G SSS+ RNL Sbjct: 1020 SRVFLGLDGSPLFFEGVRLTDVFSTPQAFLKGILSNYVADAIFRSPALLGSLEIIGSPAILVSRVVSGLKDLVLLSASG-------SLTGAGRGLLSLTRHVVGGTLASLAGFSSSVRRNL 1133
BLAST of mRNA_P-wetherbeei_contig99.1.1 vs. uniprot
Match: W7TJC5_9STRA (VPS13_C domain-containing protein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJC5_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 8.840e-16 Identity = 55/121 (45.45%), Postives = 75/121 (61.98%), Query Frame = 3 Query: 591 AQVFLSLDRTPLSFAPVDLRGVLERPDAIAAQVASSYMADALLRSPAVLGSLQMLGSPTVLLSEWAAGVYDLFALPIRAIPQGPLPTLWATGRGVASLLRHASAGTLSSLSGLSSSIARNL 953 ++VFL LD +PL F V L V P A + S+Y+ADA+ RSPA+LGSL+++GSP +L+S +G+ DL L +L GRG+ SL RH GTL+SL+G SSS+ RNL Sbjct: 3472 SRVFLGLDGSPLFFEGVRLTDVFSTPQAFLKGILSNYVADAIFRSPALLGSLEIIGSPAILVSRVVSGLKDLVMLSASG-------SLTGAGRGLLSLTRHVVGGTLASLAGFSSSVRRNL 3585
BLAST of mRNA_P-wetherbeei_contig99.1.1 vs. uniprot
Match: A0A7S1G5R3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G5R3_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.050e-14 Identity = 54/140 (38.57%), Postives = 84/140 (60.00%), Query Frame = 3 Query: 552 ISSPSSHISTSICAQVFLSLDRTPLSFAPVDLRGVLERPDAIAAQVASSYMADALLRSPAVLGSLQMLGSPTVLLSEWAAGVYDLFALPIRAIPQ------GPLPTLWATGRGVASLLRHASAGTLSSLSGLSSSIARNL 953 +S+ S ++ FLS+D PL+ A V L V P+ +A ++ ++Y+ADA+LRSPA++GSL++LG+PT + +G+ DLFALP+ AI L RG SL H + G LSS++G S++++RNL Sbjct: 21 LSAVSLLVTLQATQPAFLSVDEAPLALASVSLDCVRATPERLARELLANYIADAILRSPALVGSLELLGNPTRFMRGLGSGLRDLFALPMLAIRDREKGVGSGAGILTGFARGWGSLAAHVAEGALSSVAGFSAALSRNL 160 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig99.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig99.1.1 >prot_P-wetherbeei_contig99.1.1 ID=prot_P-wetherbeei_contig99.1.1|Name=mRNA_P-wetherbeei_contig99.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=228bp MADALLRSPAVLGSLQMLGSPTVLLSEWAAGVYDLFALPIRAIPQGPLPTback to top mRNA from alignment at P-wetherbeei_contig99:80..2145+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig99.1.1 ID=mRNA_P-wetherbeei_contig99.1.1|Name=mRNA_P-wetherbeei_contig99.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2066bp|location=Sequence derived from alignment at P-wetherbeei_contig99:80..2145+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig99:80..2145+ >mRNA_P-wetherbeei_contig99.1.1 ID=mRNA_P-wetherbeei_contig99.1.1|Name=mRNA_P-wetherbeei_contig99.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=684bp|location=Sequence derived from alignment at P-wetherbeei_contig99:80..2145+ (Phaeothamnion wetherbeei SAG_119_79)back to top |