mRNA_P-wetherbeei_contig9896.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9896.1.1
Unique NamemRNA_P-wetherbeei_contig9896.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9896.1.1 vs. uniprot
Match: D7G250_ECTSI (AAA_23 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G250_ECTSI)

HSP 1 Score: 308 bits (789), Expect = 2.400e-100
Identity = 160/251 (63.75%), Postives = 194/251 (77.29%), Query Frame = 1
Query:    1 HFSAQTIEFYSPLTMIVGENGCGKTTIIECLKLACTGSLPPGSRNGQSFIHDPKISGVADVKASIKLRFKAKGGQPMVVIRSFQLSQKKTALTFKALDGVIRTKDDATGEKLSINHKCSELDKQVPNYIGVSAAIMENVIFCHQEESSWPLQEGAVVKKKFDDIFESSRYTKALDTIKKLKQEYALKVKELRADLEGLKAHKMAAENYESVLERLQEQYMTLKHEAATIDTRINELHERQKEYSAKSREVR 753
            H   Q IEFY+PLTMIVG NGCGKTTIIECLK ACTG+LPPG+RNGQSF+HDPK+SG  +VKA+IKLRF A+     VVIRSFQL+QK+  L FKALDGVIRTK+++ G+ +SINHKC+E+DK +P  +GVS AI+ENV+FCHQE++SWPLQEGAVVKKKFDDIFES+RYTKALD IKK KQEYA  VKEL+ DL  L+    AA + +  ++   E Y TL+ E   ID R  EL E  ++  A + EVR
Sbjct:   17 HEREQVIEFYTPLTMIVGANGCGKTTIIECLKYACTGALPPGARNGQSFVHDPKVSGTNEVKANIKLRFSARDKTVGVVIRSFQLTQKRKTLQFKALDGVIRTKNES-GQSVSINHKCTEMDKHIPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALDNIKKTKQEYASTVKELKVDLAALQERLRAANDLKEEMDASTETYSTLRQEIEAIDARTAELSESLEKLRAVADEVR 266          
BLAST of mRNA_P-wetherbeei_contig9896.1.1 vs. uniprot
Match: A0A7S4KCM0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KCM0_9STRA)

HSP 1 Score: 262 bits (669), Expect = 1.040e-82
Identity = 126/239 (52.72%), Postives = 176/239 (73.64%), Query Frame = 1
Query:   13 QTIEFYSPLTMIVGENGCGKTTIIECLKLACTGSLPPGSRNGQSFIHDPKISGVADVKASIKLRFKAKGGQPMVVIRSFQLSQKKTALTFKALDGVIRTKDDATGEKLSINHKCSELDKQVPNYIGVSAAIMENVIFCHQEESSWPLQEGAVVKKKFDDIFESSRYTKALDTIKKLKQEYALKVKELRADLEGLKAHKMAAENYESVLERLQEQYMTLKHEAATIDTRINELHERQKEY 729
            Q I FYSPLT+IVG NGCGKTTIIE L+ A  G+LPPG+R+GQ+F+HDPK +G   VKA+IKLRF  + G  MVV+RS +L+QKKT + FKALDG++RT D  TGE+++++HKC ELD+Q+P  +GVS  I+E+V+F HQE+SSWPLQ+ A +K+KFDDIF+S+RY KAL+ I+K + EYA   KE +++L GL +HK AAE +    +  +++   +  + A  D  I    E++ +Y
Sbjct:   22 QVISFYSPLTVIVGNNGCGKTTIIESLRYAVAGTLPPGTRSGQAFVHDPKSAGQTSVKANIKLRFNNRAGNSMVVVRSMELTQKKTTMQFKALDGILRTNDPNTGERVALSHKCGELDRQIPTLMGVSKPILEHVVFTHQEDSSWPLQDAASLKRKFDDIFDSTRYAKALEAIRKSRLEYANVAKEHKSELSGLASHKHAAEGFRQETDMARDELAEIDEKMAACDESIERESEKRSKY 260          
BLAST of mRNA_P-wetherbeei_contig9896.1.1 vs. uniprot
Match: A0A835YS38_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS38_9STRA)

HSP 1 Score: 254 bits (648), Expect = 5.570e-82
Identity = 128/202 (63.37%), Postives = 155/202 (76.73%), Query Frame = 1
Query:   13 QTIEFYSPLTMIVGENGCGKTTIIECLKLACTGSLPPGSRNGQSFIHDPKISGVADVKASIKLRFKAKGGQPMVVIRSFQLSQKKTALTFKALDGVIRTKDDATGEKLSINHKCSELDKQVPNYIGVSAAIMENVIFCHQEESSWPLQEGAVVKKKFDDIFESSRYTKALDTIKKLKQEYALKVKELRADLEGLKAHKMAAE 618
            Q IEFY PLTMIVG NGCGKTTIIECL+ A TG LPP SRNGQ+F+HDPK+S   +VKA IKLR +     P+VV+RS QL+QKKT + FKALDGV++  ++  G   S   KC++LDKQ+P  + VS AI+E+VIFCHQEESSWPLQEGAV+KKKFDDIFES+RYTKALD IK  + E A KVK+ + +L  L AH  AA+
Sbjct:   21 QIIEFYMPLTMIVGSNGCGKTTIIECLRYATTGILPPNSRNGQTFVHDPKMSNTTEVKAQIKLRLQRGVDMPIVVVRSLQLTQKKTTMQFKALDGVLKYGNNDGGNTSSTGVKCTDLDKQLPTLMRVSRAILESVIFCHQEESSWPLQEGAVLKKKFDDIFESARYTKALDVIKATRVELANKVKDYKGELAALTAHSEAAD 222          
BLAST of mRNA_P-wetherbeei_contig9896.1.1 vs. uniprot
Match: H3GA74_PHYRM (AAA_23 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GA74_PHYRM)

HSP 1 Score: 253 bits (645), Expect = 1.340e-81
Identity = 121/194 (62.37%), Postives = 160/194 (82.47%), Query Frame = 1
Query:   13 QTIEFYSPLTMIVGENGCGKTTIIECLKLACTGSLPPGSRNGQSFIHDPKISGVADVKASIKLRFKAKGGQPMVVIRSFQLSQKKTALTFKALDGVIRTKDDATGEKLSINHKCSELDKQVPNYIGVSAAIMENVIFCHQEESSWPLQEGAVVKKKFDDIFESSRYTKALDTIKKLKQEYALKVKELRADLEGL 594
            Q IEFY PLT+++G+NGCGKTT+IECLKLACTG LPPG+R+GQS IHDPKI+G  +VKASI+LRF+ + G+ MVV R++Q+ Q K  L FKALDGVIR  ++  GEK+S+NHKC ELD+ +P+ +GVS AI+E+VIFCHQE+S+WPL+EGA +KK+FD+IFES+RYTKAL+ I+KLK+      K+ + DL+ L
Sbjct:   21 QIIEFYHPLTVLLGDNGCGKTTVIECLKLACTGGLPPGARSGQSLIHDPKIAGTNEVKASIRLRFRNRAGKAMVVQRTYQVRQTKKNLVFKALDGVIRVVNEL-GEKVSLNHKCGELDQHIPDMLGVSKAILESVIFCHQEDSNWPLREGAELKKRFDNIFESARYTKALEAIRKLKKARMDNAKDYKRDLDVL 213          
BLAST of mRNA_P-wetherbeei_contig9896.1.1 vs. uniprot
Match: A0A2P4XQ47_9STRA (DNA repair protein RAD50 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XQ47_9STRA)

HSP 1 Score: 254 bits (649), Expect = 1.810e-80
Identity = 124/213 (58.22%), Postives = 168/213 (78.87%), Query Frame = 1
Query:   13 QTIEFYSPLTMIVGENGCGKTTIIECLKLACTGSLPPGSRNGQSFIHDPKISGVADVKASIKLRFKAKGGQPMVVIRSFQLSQKKTALTFKALDGVIRTKDDATGEKLSINHKCSELDKQVPNYIGVSAAIMENVIFCHQEESSWPLQEGAVVKKKFDDIFESSRYTKALDTIKKLKQEYALKVKELRADLEGLKAHKMAAENYESVLERLQE 651
            + +EFY PLT+++G+NGCGKTT+IECLKLACTG LPPG+R+G S IHDPKI+G  +VKASI+LRF+ + G+ MVV R++Q+ Q K AL FKALDGVIR  ++  GEK+S+NHKC ELD+ +P+ +GVS AI+E+VIFCHQE+S+WPL+EGA +KK+FD+IFES+RYTKAL+ I+KLK+      K+ + DL+ L  +  AA +    +E  QE
Sbjct:   21 EILEFYHPLTVLLGDNGCGKTTVIECLKLACTGGLPPGARSGHSLIHDPKIAGTNEVKASIRLRFRNRAGKAMVVNRTYQVRQTKKALQFKALDGVIRVVNEL-GEKVSLNHKCGELDQHIPDMLGVSKAILESVIFCHQEDSNWPLREGAELKKRFDNIFESARYTKALEAIRKLKKARLDNAKDYKRDLDVLTVNMKAAGDIRDKIELAQE 232          
BLAST of mRNA_P-wetherbeei_contig9896.1.1 vs. uniprot
Match: B8CAM3_THAPS (AAA_23 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAM3_THAPS)

HSP 1 Score: 273 bits (697), Expect = 2.030e-80
Identity = 132/204 (64.71%), Postives = 167/204 (81.86%), Query Frame = 1
Query:   13 QTIEFYSPLTMIVGENGCGKTTIIECLKLACTGSLPPGSRNGQSFIHDPKISGVADVKASIKLRFKAKGGQPMVVIRSFQLSQKKTALTFKALDGVIRTKDDATGEKLSINHKCSELDKQVPNYIGVSAAIMENVIFCHQEESSWPLQEGAVVKKKFDDIFESSRYTKALDTIKKLKQEYALKVKELRADLEGLKAHKMAAENY 624
            Q I F  PLT+IVG NGCGKTTIIE LK A TGSLPPG+++GQSF+HDPK  G + VKASIKLRF  +G   MVVIRS +++QKK    FKALDG++RT D  TGE+ S++HKC+ELDKQ+P+ +GVS  I+E+V+FCHQE+SSWPLQEGAV+KK+FDDIF+S+RY KAL+ IK  ++EYA +VK+L+ADLEGLK+HK AA  +
Sbjct:   22 QVIGFCFPLTIIVGANGCGKTTIIESLKYAVTGSLPPGNKSGQSFVHDPKSIGQSSVKASIKLRFNNRGNHSMVVIRSMEVTQKKATANFKALDGILRTVDPNTGERTSLSHKCTELDKQIPHLMGVSKPILEHVVFCHQEDSSWPLQEGAVLKKRFDDIFDSTRYAKALEAIKGSRKEYASQVKDLKADLEGLKSHKHAASGF 225          
BLAST of mRNA_P-wetherbeei_contig9896.1.1 vs. uniprot
Match: F0Y226_AURAN (AAA_23 domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y226_AURAN)

HSP 1 Score: 248 bits (633), Expect = 6.380e-80
Identity = 125/194 (64.43%), Postives = 153/194 (78.87%), Query Frame = 1
Query:   13 QTIEFYSPLTMIVGENGCGKTTIIECLKLACTGSLPPGSRNGQSFIHDPKISGVADVKASIKLRFKAKGGQPMVVIRSFQLSQKKTALTFKALDGVIRTKDDATGEKLSINHKCSELDKQVPNYIGVSAAIMENVIFCHQEESSWPLQEGAVVKKKFDDIFESSRYTKALDTIKKLKQEYALKVKELRADLEGL 594
            + IEF +PLTMIVG NGCGKTT+IE      TG  PPGS +G++F+HDPK+SGV +VKA +KLRFK   GQ MVV+RS QL+Q+KT  TFK +DGVIR  +DA+GE+ S  HKC ELDK VP  IGVS A++E+VIFCHQEESSWPLQEGAV+KKKFDDIFES+RY+KALD ++K +     +VKEL  DL+GL
Sbjct:   21 EAIEFQTPLTMIVGANGCGKTTVIE---YGTTGCAPPGSNSGRAFVHDPKVSGVTEVKAQLKLRFKNYAGQRMVVVRSMQLTQRKTTATFKQMDGVIRA-NDASGERTSYTHKCGELDKTVPMLIGVSKAVLESVIFCHQEESSWPLQEGAVLKKKFDDIFESARYSKALDELRKQRLAKNAQVKELVGDLKGL 210          
BLAST of mRNA_P-wetherbeei_contig9896.1.1 vs. uniprot
Match: A0A8J2S5K6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S5K6_9STRA)

HSP 1 Score: 268 bits (686), Expect = 6.860e-79
Identity = 135/205 (65.85%), Postives = 164/205 (80.00%), Query Frame = 1
Query:   13 QTIEFYSPLTMIVGENGCGKTTIIECLKLACTGSLPPGSRNGQSFIHDPKISGVADVKASIKLRFKAKGGQPMVVIRSFQLSQKKTALTFKALDGVIR-TKDDATGEKLSINHKCSELDKQVPNYIGVSAAIMENVIFCHQEESSWPLQEGAVVKKKFDDIFESSRYTKALDTIKKLKQEYALKVKELRADLEGLKAHKMAAENY 624
            Q IEF SPLTMIVG NGCGKTT+IECLK   TG  PPGS +G++F+HDPK++GV++VKA +KLRFK  GGQ MVV+RS QL+QKKT  TFK LDGVIR TK D  G K S  HKC ELDK VP  IGVS A++E+VIFCHQE+SSWPLQEGAV+KK+FDDIF+S+RYTKALD + K K+  A K K++  DL+GL A K+AA+++
Sbjct:   21 QAIEFESPLTMIVGANGCGKTTVIECLKFGTTGQAPPGSASGKAFVHDPKVTGVSEVKAQLKLRFKNYGGQRMVVVRSMQLTQKKTTATFKQLDGVIRATKPD--GSKTSYTHKCGELDKTVPIMIGVSRAVLESVIFCHQEDSSWPLQEGAVLKKRFDDIFDSARYTKALDVLNKQKKGLASKAKDISGDLKGLHADKVAAQDH 223          
BLAST of mRNA_P-wetherbeei_contig9896.1.1 vs. uniprot
Match: A0A1V9ZZA5_9STRA (DNA repair protein RAD50 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZA5_9STRA)

HSP 1 Score: 267 bits (683), Expect = 1.400e-78
Identity = 135/232 (58.19%), Postives = 179/232 (77.16%), Query Frame = 1
Query:   13 QTIEFYSPLTMIVGENGCGKTTIIECLKLACTGSLPPGSRNGQSFIHDPKISGVADVKASIKLRFKAKGGQPMVVIRSFQLSQKKTALTFKALDGVIRTKDDATGEKLSINHKCSELDKQVPNYIGVSAAIMENVIFCHQEESSWPLQEGAVVKKKFDDIFESSRYTKALDTIKKLKQEYALKVKELRADLEGLKAHKMAAENYESVLERLQEQYMTLKHEAATIDTRINEL 708
            +TI+F  PLT+I+G NGCGKTTIIECLK++CTGSLPP +R+GQSFIHDPKI G  +VKAS++LRFK++ GQ MVV R+F+L Q KT   F+A+DGV+R  ++  GEK+SIN KCSELDK +P+ +GVS A++E+VIFCHQEES+WPLQEGAV+KK+FDDIFES+RYTKAL+ IKKLK++     K+++ DL+ +        + ES LE  Q +   LK E A +   I++L
Sbjct:   21 ETIDFNQPLTVILGANGCGKTTIIECLKVSCTGSLPPSARSGQSFIHDPKIRGDVEVKASVRLRFKSRAGQTMVVQRTFRLQQMKTNCKFQAMDGVVRMINEH-GEKVSINQKCSELDKHIPDLLGVSKAVLESVIFCHQEESNWPLQEGAVLKKRFDDIFESARYTKALEAIKKLKKDRLTMAKDMKRDLDVIGEQVKRVRDMESQLEARQAKLEELKDEFALMSGEIDQL 251          
BLAST of mRNA_P-wetherbeei_contig9896.1.1 vs. uniprot
Match: A0A1E7F3C8_9STRA (AAA_23 domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F3C8_9STRA)

HSP 1 Score: 244 bits (623), Expect = 1.780e-78
Identity = 117/186 (62.90%), Postives = 152/186 (81.72%), Query Frame = 1
Query:   13 QTIEFYSPLTMIVGENGCGKTTIIECLKLACTGSLPPGSRNGQSFIHDPKISGVADVKASIKLRFKAKGGQPMVVIRSFQLSQKKTALTFKALDGVIRTKDDATGEKLSINHKCSELDKQVPNYIGVSAAIMENVIFCHQEESSWPLQEGAVVKKKFDDIFESSRYTKALDTIKKLKQEYALKVKE 570
            Q +EFY PLT+IVGE  CGKTTIIE LK A  G+LPPG   GQ+F+HDPK  G   VKA++KLRF A GG+ MV++RS +++QKKT +TFK LDG +RT ++ TGE+++++HKC+ELD+Q+P  +GVS AI+ENV+FCHQE++SWPLQEGAV+KKKFDDIF+S+RYTKALD   K K+EY LK K+
Sbjct:   22 QVLEFYMPLTVIVGE--CGKTTIIEALKFAVCGALPPGKNAGQAFVHDPKSIGSTSVKANLKLRFTAHGGKSMVIVRSMEVTQKKTTMTFKQLDGNLRTVNN-TGERIAMSHKCTELDRQIPLMLGVSKAILENVVFCHQEDASWPLQEGAVLKKKFDDIFDSTRYTKALDVFSKAKKEYVLKAKD 204          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9896.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G250_ECTSI2.400e-10063.75AAA_23 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A7S4KCM0_9STRA1.040e-8252.72Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A835YS38_9STRA5.570e-8263.37AAA domain-containing protein n=1 Tax=Tribonema mi... [more]
H3GA74_PHYRM1.340e-8162.37AAA_23 domain-containing protein n=1 Tax=Phytophth... [more]
A0A2P4XQ47_9STRA1.810e-8058.22DNA repair protein RAD50 (Fragment) n=1 Tax=Phytop... [more]
B8CAM3_THAPS2.030e-8064.71AAA_23 domain-containing protein n=1 Tax=Thalassio... [more]
F0Y226_AURAN6.380e-8064.43AAA_23 domain-containing protein (Fragment) n=1 Ta... [more]
A0A8J2S5K6_9STRA6.860e-7965.85Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A1V9ZZA5_9STRA1.400e-7858.19DNA repair protein RAD50 n=1 Tax=Thraustotheca cla... [more]
A0A1E7F3C8_9STRA1.780e-7862.90AAA_23 domain-containing protein (Fragment) n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9896contigP-wetherbeei_contig9896:2..1910 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G250
Preferred nameRAD50
PFAMsAAA_23,Rad50_zn_hook,SbcCD_C
Model size756
Max annot lvl2759|Eukaryota
KEGG koko:K10866
KEGG Pathwayko03440,ko03450,ko04218,map03440,map03450,map04218
KEGG ModuleM00291,M00292,M00295
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000018,GO:0000019,GO:0000075,GO:0000077,GO:0000166,GO:0000228,GO:0000278,GO:0000280,GO:0000706,GO:0000722,GO:0000723,GO:0000724,GO:0000725,GO:0000726,GO:0000727,GO:0000729,GO:0000781,GO:0000784,GO:0000785,GO:0000790,GO:0000793,GO:0000794,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003690,GO:0003691,GO:0003697,GO:0003824,GO:0004003,GO:0004017,GO:0004386,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006278,GO:0006281,GO:0006284,GO:0006302,GO:0006303,GO:0006310,GO:0006312,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007004,GO:0007049,GO:0007093,GO:0007127,GO:0007131,GO:0007154,GO:0007165,GO:0007346,GO:0008026,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009117,GO:0009123,GO:0009165,GO:0009892,GO:0009987,GO:0010520,GO:0010564,GO:0010605,GO:0010705,GO:0010833,GO:0016043,GO:0016233,GO:0016301,GO:0016310,GO:0016462,GO:0016740,GO:0016772,GO:0016776,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019205,GO:0019219,GO:0019222,GO:0019438,GO:0019637,GO:0022402,GO:0022414,GO:0023052,GO:0030554,GO:0030674,GO:0030870,GO:0031297,GO:0031323,GO:0031324,GO:0031570,GO:0031573,GO:0031974,GO:0031981,GO:0032069,GO:0032070,GO:0032071,GO:0032074,GO:0032076,GO:0032078,GO:0032200,GO:0032392,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033043,GO:0033260,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0035556,GO:0035639,GO:0035753,GO:0035825,GO:0035861,GO:0036094,GO:0040020,GO:0042138,GO:0042162,GO:0042592,GO:0042623,GO:0042769,GO:0042770,GO:0043047,GO:0043086,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0043570,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044773,GO:0044774,GO:0044786,GO:0045005,GO:0045786,GO:0045930,GO:0045934,GO:0046483,GO:0046940,GO:0048285,GO:0048519,GO:0048523,GO:0050145,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051128,GO:0051171,GO:0051172,GO:0051276,GO:0051321,GO:0051336,GO:0051346,GO:0051445,GO:0051606,GO:0051716,GO:0051726,GO:0051783,GO:0051880,GO:0055086,GO:0060090,GO:0060249,GO:0060255,GO:0060631,GO:0061982,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070035,GO:0070192,GO:0071103,GO:0071704,GO:0071840,GO:0071897,GO:0072395,GO:0072401,GO:0072422,GO:0080090,GO:0090304,GO:0090305,GO:0090407,GO:0090734,GO:0097159,GO:0097367,GO:0097551,GO:0097552,GO:0098687,GO:0098847,GO:0110025,GO:0140013,GO:0140097,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902298,GO:1902969,GO:1903046,GO:1903047,GO:1903211,GO:1990426,GO:1990505,GO:1990898,GO:1990918,GO:2000241
Exons6
Evalue3.93e-101
EggNOG OGsCOG0419@1|root,KOG0962@2759|Eukaryota
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-01_009240.1
DescriptionG-quadruplex DNA binding
Cds size756
COG categoryL
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9896.1.1prot_P-wetherbeei_contig9896.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9896 2..1910 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187115.250206-CDS-P-wetherbeei_contig9896:1..1901683187115.250206-CDS-P-wetherbeei_contig9896:1..190Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9896 2..190 -
1683187115.26784-CDS-P-wetherbeei_contig9896:530..7251683187115.26784-CDS-P-wetherbeei_contig9896:530..725Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9896 531..725 -
1683187115.2766266-CDS-P-wetherbeei_contig9896:967..10341683187115.2766266-CDS-P-wetherbeei_contig9896:967..1034Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9896 968..1034 -
1683187115.2850626-CDS-P-wetherbeei_contig9896:1233..13131683187115.2850626-CDS-P-wetherbeei_contig9896:1233..1313Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9896 1234..1313 -
1683187115.2936969-CDS-P-wetherbeei_contig9896:1534..15971683187115.2936969-CDS-P-wetherbeei_contig9896:1534..1597Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9896 1535..1597 -
1683187115.3068788-CDS-P-wetherbeei_contig9896:1748..19101683187115.3068788-CDS-P-wetherbeei_contig9896:1748..1910Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9896 1749..1910 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9896.1.1

>prot_P-wetherbeei_contig9896.1.1 ID=prot_P-wetherbeei_contig9896.1.1|Name=mRNA_P-wetherbeei_contig9896.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=252bp
HFSAQTIEFYSPLTMIVGENGCGKTTIIECLKLACTGSLPPGSRNGQSFI
HDPKISGVADVKASIKLRFKAKGGQPMVVIRSFQLSQKKTALTFKALDGV
IRTKDDATGEKLSINHKCSELDKQVPNYIGVSAAIMENVIFCHQEESSWP
LQEGAVVKKKFDDIFESSRYTKALDTIKKLKQEYALKVKELRADLEGLKA
HKMAAENYESVLERLQEQYMTLKHEAATIDTRINELHERQKEYSAKSREV
RQ
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mRNA from alignment at P-wetherbeei_contig9896:2..1910-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9896.1.1 ID=mRNA_P-wetherbeei_contig9896.1.1|Name=mRNA_P-wetherbeei_contig9896.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1909bp|location=Sequence derived from alignment at P-wetherbeei_contig9896:2..1910- (Phaeothamnion wetherbeei SAG_119_79)
CATTTCTCTGCACAGACCATCGAGTTCTACTCGCCGCTGACCATGATTGT CGGCGAGAACGGCTGCGGCAAGACTACGATCATCGAGTGCCTAAAGCTCG CGTGCACCGGGTCGCTGCCGCCGGGGTCCCGCAACGGGCAGTCTTTCATC CACGATCCAAAGGTGCAGACAGCGCACCGATTCTTAATGCAAGCCTCCCC TCCCTTAACCAATCGCTACCATCTTCTTCGTCCCGTATGCATAATGATAT GGCGCTGCTGTCTCTTAAACCTCTTCTGACGCTCTCGCGCGCGGTTTGCC TGCTGCTTCGCAGATCTCGGGGGTGGCTGACGTCAAAGCGAGCATCAAGC TTCGCTTCAAAGCCAAAGGCGGCCAGGTAAATCCTCTTCTCGGGACGGTG GCGCATTCGCTTTGCCTCGTTCTTGTTCGCCCTATCAGACGGGTTTCTTC GTTAAAAATGCGCCGGCGCGTTTTCAGGTGCAATAGGACGCTCGCAACCC ATTCACCCTTCGATGCAGATGACAGCTCTGCCTCTCATAATGCCTACGAA AAAGGATACACGTGCCTTCTTTATTTGCCTTCCGTGCCTCTCTTCAGCCC ATGGTGGTCATACGATCGTTCCAGCTTAGTCAGAAAAAGACAGCGCTGAC ATTCAAGGCGCTCGACGGCGTTATCAGGTAAAGCGTGCATTGCCGTTCCT CCATGTATTTTGGGATGCGTCTTGCGGTATGGTTTTCCCAGGGAAAGGTT TCGATAGAGCGTAAGCGTGCGTAGCGGGCGTTCCTGTACTCATTATAGTG TCGAAGAGGGCTTTAGGTCGGGTTAAATTTTTATGATCGTTCTCTTTCCC TTTCTCCGCTTTCCCTCTTATGGCAGGACAAAAGACGACGCAACCGGCGA GAAGCTGAGCATCAATCACAAGTGCTCGGAGCTCGACAAGCAGGTGGGTT GTGTCGGGACATTTTTTCGCCGTGTTATTGGGTTTTTGGGAGTTGATAAA TAATTGGCTCCTCTGTGCACCGTTTCCTTCCATCCATTCGTTGGCCGTCT TTCTTCAATAAAGAAGAGGAGAGGGATGTCTCTGACGAATAAGTGGTTGA TGTATTGTCCTGCTGGCCCTCGTCATCATGTGGCCGGTCCGTGTGTTGAA ACTTTGTTTGAATCGACCCAAATCAACACAAACAGGTGCCCAACTACATC GGCGTGTCGGCGGCCATAATGGAGAACGTGATATTCTGCCACCAGGAGGA GAGCAGCTGGCCGCTGCAGGAGGGCGCCGTTGTCAAGAAGAAGTTTGACG ACATCTTCGAGTCGAGCCGCTACACAAAGGCCCTCGACACGATCAAGAAG CTAAAGCAGGAGTACGCGCTCAAGGTCAAGGTCAGTTTACCTCAGCTAGT AGCTTTGCTGCGGCAGTCCGGTGCTGCGCGCCGGTACTGTGCCCTTCAGA TAGTCTAGCGCATTCGGAGTCATTGTAGCACATGGAGAATGTGCTGCAAA ATGTTATATTGTGTTGGGAAGGATCTTATCCGCGCTTTTCTTCTGTGTGC TTCTAGCCCTCGTGTTTCACTGAAGCTACCGCCTTTTCGTGGGAAGAAAG AAACTGCGAATCCTTGTAACTGTTCTGCTGGCCAGATTTTATTTGCCCCT CTCGTTCTACATCCACCTTGGGAACATCTGCGTCTACTTAGCCGATAACA ATCTCTCCAAACATGTGCAGGAGCTGCGGGCGGACCTGGAGGGGCTGAAA GCGCACAAGATGGCGGCGGAGAACTACGAGAGCGTTCTAGAGCGGCTCCA GGAGCAATACATGACCCTCAAGCATGAGGCCGCCACCATCGACACCCGCA TCAACGAGCTGCATGAGCGCCAAAAGGAGTACTCAGCCAAGTCCCGTGAG GTCCGTCAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9896:2..1910-

>mRNA_P-wetherbeei_contig9896.1.1 ID=mRNA_P-wetherbeei_contig9896.1.1|Name=mRNA_P-wetherbeei_contig9896.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=756bp|location=Sequence derived from alignment at P-wetherbeei_contig9896:2..1910- (Phaeothamnion wetherbeei SAG_119_79)
CATTTCTCTGCACAGACCATCGAGTTCTACTCGCCGCTGACCATGATTGT
CGGCGAGAACGGCTGCGGCAAGACTACGATCATCGAGTGCCTAAAGCTCG
CGTGCACCGGGTCGCTGCCGCCGGGGTCCCGCAACGGGCAGTCTTTCATC
CACGATCCAAAGATCTCGGGGGTGGCTGACGTCAAAGCGAGCATCAAGCT
TCGCTTCAAAGCCAAAGGCGGCCAGCCCATGGTGGTCATACGATCGTTCC
AGCTTAGTCAGAAAAAGACAGCGCTGACATTCAAGGCGCTCGACGGCGTT
ATCAGGACAAAAGACGACGCAACCGGCGAGAAGCTGAGCATCAATCACAA
GTGCTCGGAGCTCGACAAGCAGGTGCCCAACTACATCGGCGTGTCGGCGG
CCATAATGGAGAACGTGATATTCTGCCACCAGGAGGAGAGCAGCTGGCCG
CTGCAGGAGGGCGCCGTTGTCAAGAAGAAGTTTGACGACATCTTCGAGTC
GAGCCGCTACACAAAGGCCCTCGACACGATCAAGAAGCTAAAGCAGGAGT
ACGCGCTCAAGGTCAAGGAGCTGCGGGCGGACCTGGAGGGGCTGAAAGCG
CACAAGATGGCGGCGGAGAACTACGAGAGCGTTCTAGAGCGGCTCCAGGA
GCAATACATGACCCTCAAGCATGAGGCCGCCACCATCGACACCCGCATCA
ACGAGCTGCATGAGCGCCAAAAGGAGTACTCAGCCAAGTCCCGTGAGGTC
CGTCAG
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